| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is wzx
Identifier: 148381045
GI number: 148381045
Start: 3280208
End: 3281632
Strand: Reverse
Name: wzx
Synonym: CBO3094
Alternate gene names: NA
Gene position: 3281632-3280208 (Counterclockwise)
Preceding gene: 148381046
Following gene: 148381044
Centisome position: 84.43
GC content: 26.18
Gene sequence:
>1425_bases ATGAGTGATAGTCCCAAACAGTTTATAAAAAGATTTATTGGTTTTTCTATGGGACCAATATTATCAGCTATTATTAGCTT TTTTACTGTTCCTATAACTACATATTTTGTAGTTCCAACAGAATTTGGAAAAGCTTCTATGTATACAATGGCTTTAAGCA TTAGTTCAATGTTTATATTTTTAGGTATGGATCAATCTTTTACTAGAGAGTTTAATTCAGAAGAAGATAAAAAATCTTTA TTTTGGAATTCCTTAATAGTGCCTTTAATATTTTCGTTGATACTAGGAGCTTTTTATATAATTTATTATAAACCATTATC TGTATTAATGATTGATACTGTTGATAGGTATATAGTAGTTATATTGGCATTATCATTACCTTTTGCAGTTATAGATAGAT TTAATTTATTATTGATAAGAATGGAAGAGAAAGCTAGATTATATTCTGTCTTAAATGTAATAAGTAAAGTTATAAATGTT GTAGTTTTAGTACCATATCTTTTATATATAGATAAAAGTTTTAAAGGAATAATAAACGCAGGTTTTGTGTCACTAGTTTT TATGTGTATAGTAGAATGTCTTTTTATAGGAGATTACTGGATTGCAAAATTTAAAATAAATAAAACTTTAATAAATAAAA TGTTTAGATATGGGATACCTTTAATACCAGCATCTGTAATTGTTTGGTTTTTGAATTCTATGGATAAAATAGCAATGAGA CAATGGTCCTCTTTTGAAGAAATAGGATTGTATTCTGCAGCATTTAAAATTGTTACTGTAGTAAGTATAGTTCAAAGTGC ATTTTGTACTTTTTGGACGCCAACTGCATTTAGATGGTATGAAGAAAAGGTAGAAGGCGAAAAATTTATGAAGGTAAGCA ATATGTTAATGTGTTTCATGAACTTTATGTTTGTAGGAATAGTTTTATTTAGGGATTTAATAATAAAACTATTAGATGCA AGTTATGCTAGTTCAGCCATTATAGTTCCGTTTTTATTATTGTTACCTATAATGTATACTGTATCAGAATCAACTTGTTT AGGCATATCTTTTTCAAGAAAGACATCTTACAATATAATAGTATCATTAATAGCAGCTGTGGTTAATTATATTTTAAATT ATTTATTAGTTCCAAAGTATGGAGCTTTAGGAGCTTCCATAGCTACCGGAATAGCCTATACAGTATTCTTTTGGGTAAGA ACACTTATATCAAGAAAGCTATGGTTTAAATTTAAACTAGGCTTTTATATATTAAATACAGCATCCATGTTATTGTTAGC ATCGTTAGATGTGTTGTATAATAATCTTTATATAAATATCGCTATATCTTTATTTATTGTATATGTAAATAGAAATGAAG TTAAATCTATTATATCTTATATTAAGATGTTTTTAAAAGATAGAAAAAATAAAGCCGTTGCTTAA
Upstream 100 bases:
>100_bases AAATGAGAAGTGTAAAATATCTGTATTTATTTAACTATAATTTAGATGAAATAGAAATCAATATAGATTAAGTTTTATTT TATCTTAGGAGGAAACTAAT
Downstream 100 bases:
>100_bases TATTATTTAGGAGGTTAAAAATGAAGTTTAAAATGCCAATTATAGATATAGAAAAAGATATAAAAAGTAAAAAAGTACAA TTTGTTATAAAGAGATTTTC
Product: O antigen repeat-containing flippase
Products: NA
Alternate protein names: Exopolysaccharide Biosynthesis Protein; Exopolysacharide Protein Wzx; Lipopolysaccharide Biosynthesis Protein; Polysaccharide Transporter; Heteropolysaccharide Repeat-Containing Protein; Polysaccharide Biosynthesis Family Protein; O-Antigen Translocase; O-Antigen And Teichoic Acid Export Protein; Multi Anti Extrusion Protein MatE; Polysaccharide Biosynthesis Protein CpsL; Polysaccharide Biosynthesis Related Protein; Capsular Polysaccharide Repeating Unit Transporter CpsL; Cytosol Aminopeptidase; Polysaccharide Biosynthesis Protein Wzx; Lipopolysaccharide Biosynthesis Translocase; Polysaccharide Biosynthesis Protein-Like Protein; Flippase Wzx
Number of amino acids: Translated: 474; Mature: 473
Protein sequence:
>474_residues MSDSPKQFIKRFIGFSMGPILSAIISFFTVPITTYFVVPTEFGKASMYTMALSISSMFIFLGMDQSFTREFNSEEDKKSL FWNSLIVPLIFSLILGAFYIIYYKPLSVLMIDTVDRYIVVILALSLPFAVIDRFNLLLIRMEEKARLYSVLNVISKVINV VVLVPYLLYIDKSFKGIINAGFVSLVFMCIVECLFIGDYWIAKFKINKTLINKMFRYGIPLIPASVIVWFLNSMDKIAMR QWSSFEEIGLYSAAFKIVTVVSIVQSAFCTFWTPTAFRWYEEKVEGEKFMKVSNMLMCFMNFMFVGIVLFRDLIIKLLDA SYASSAIIVPFLLLLPIMYTVSESTCLGISFSRKTSYNIIVSLIAAVVNYILNYLLVPKYGALGASIATGIAYTVFFWVR TLISRKLWFKFKLGFYILNTASMLLLASLDVLYNNLYINIAISLFIVYVNRNEVKSIISYIKMFLKDRKNKAVA
Sequences:
>Translated_474_residues MSDSPKQFIKRFIGFSMGPILSAIISFFTVPITTYFVVPTEFGKASMYTMALSISSMFIFLGMDQSFTREFNSEEDKKSL FWNSLIVPLIFSLILGAFYIIYYKPLSVLMIDTVDRYIVVILALSLPFAVIDRFNLLLIRMEEKARLYSVLNVISKVINV VVLVPYLLYIDKSFKGIINAGFVSLVFMCIVECLFIGDYWIAKFKINKTLINKMFRYGIPLIPASVIVWFLNSMDKIAMR QWSSFEEIGLYSAAFKIVTVVSIVQSAFCTFWTPTAFRWYEEKVEGEKFMKVSNMLMCFMNFMFVGIVLFRDLIIKLLDA SYASSAIIVPFLLLLPIMYTVSESTCLGISFSRKTSYNIIVSLIAAVVNYILNYLLVPKYGALGASIATGIAYTVFFWVR TLISRKLWFKFKLGFYILNTASMLLLASLDVLYNNLYINIAISLFIVYVNRNEVKSIISYIKMFLKDRKNKAVA >Mature_473_residues SDSPKQFIKRFIGFSMGPILSAIISFFTVPITTYFVVPTEFGKASMYTMALSISSMFIFLGMDQSFTREFNSEEDKKSLF WNSLIVPLIFSLILGAFYIIYYKPLSVLMIDTVDRYIVVILALSLPFAVIDRFNLLLIRMEEKARLYSVLNVISKVINVV VLVPYLLYIDKSFKGIINAGFVSLVFMCIVECLFIGDYWIAKFKINKTLINKMFRYGIPLIPASVIVWFLNSMDKIAMRQ WSSFEEIGLYSAAFKIVTVVSIVQSAFCTFWTPTAFRWYEEKVEGEKFMKVSNMLMCFMNFMFVGIVLFRDLIIKLLDAS YASSAIIVPFLLLLPIMYTVSESTCLGISFSRKTSYNIIVSLIAAVVNYILNYLLVPKYGALGASIATGIAYTVFFWVRT LISRKLWFKFKLGFYILNTASMLLLASLDVLYNNLYINIAISLFIVYVNRNEVKSIISYIKMFLKDRKNKAVA
Specific function: Unknown
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54306; Mature: 54175
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: PS00027 HOMEOBOX_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSPKQFIKRFIGFSMGPILSAIISFFTVPITTYFVVPTEFGKASMYTMALSISSMFIF CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHE LGMDQSFTREFNSEEDKKSLFWNSLIVPLIFSLILGAFYIIYYKPLSVLMIDTVDRYIVV ECCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILALSLPFAVIDRFNLLLIRMEEKARLYSVLNVISKVINVVVLVPYLLYIDKSFKGIINA HHHHHHHHHHHHCHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFVSLVFMCIVECLFIGDYWIAKFKINKTLINKMFRYGIPLIPASVIVWFLNSMDKIAMR HHHHHHHHHHHHHHHHCCHHHEEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH QWSSFEEIGLYSAAFKIVTVVSIVQSAFCTFWTPTAFRWYEEKVEGEKFMKVSNMLMCFM HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHH NFMFVGIVLFRDLIIKLLDASYASSAIIVPFLLLLPIMYTVSESTCLGISFSRKTSYNII HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHH VSLIAAVVNYILNYLLVPKYGALGASIATGIAYTVFFWVRTLISRKLWFKFKLGFYILNT HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASMLLLASLDVLYNNLYINIAISLFIVYVNRNEVKSIISYIKMFLKDRKNKAVA HHHHHHHHHHHHHHHHHHEEEEHHHEEEECHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SDSPKQFIKRFIGFSMGPILSAIISFFTVPITTYFVVPTEFGKASMYTMALSISSMFIF CCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHE LGMDQSFTREFNSEEDKKSLFWNSLIVPLIFSLILGAFYIIYYKPLSVLMIDTVDRYIVV ECCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILALSLPFAVIDRFNLLLIRMEEKARLYSVLNVISKVINVVVLVPYLLYIDKSFKGIINA HHHHHHHHHHHHCHHEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFVSLVFMCIVECLFIGDYWIAKFKINKTLINKMFRYGIPLIPASVIVWFLNSMDKIAMR HHHHHHHHHHHHHHHHCCHHHEEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH QWSSFEEIGLYSAAFKIVTVVSIVQSAFCTFWTPTAFRWYEEKVEGEKFMKVSNMLMCFM HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHH NFMFVGIVLFRDLIIKLLDASYASSAIIVPFLLLLPIMYTVSESTCLGISFSRKTSYNII HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHH VSLIAAVVNYILNYLLVPKYGALGASIATGIAYTVFFWVRTLISRKLWFKFKLGFYILNT HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASMLLLASLDVLYNNLYINIAISLFIVYVNRNEVKSIISYIKMFLKDRKNKAVA HHHHHHHHHHHHHHHHHHEEEEHHHEEEECHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA