| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is 148380979
Identifier: 148380979
GI number: 148380979
Start: 3222645
End: 3222986
Strand: Reverse
Name: 148380979
Synonym: CBO3030
Alternate gene names: NA
Gene position: 3222986-3222645 (Counterclockwise)
Preceding gene: 148380980
Following gene: 148380978
Centisome position: 82.92
GC content: 25.44
Gene sequence:
>342_bases ATGGCACATATGGGATATAAAAATTTTAGGGAGCCAGTAGTATATATTTTAAATCAAGAATTAAGAAAAAGAAATTTCAA AAATCAAATAAATACAAATGAAGATTCAAAATATGCTGGGGAATTACCCGAATATCCATGTAGAATAATTAGAGATAGTA ATAATAAGGCATATAAATTTATATATGCTAGTGGAACAGATATGCAATGGCAAGAAGAACTAATTAGAAATGCAGAAGGT AAGGTATATAGAATTAAAACAACGTACCCTAATAATACAAATAAAACAATACAATTAATTAAAGATAATCATGGTAAATT AGAAACAATAGATTATGTATAG
Upstream 100 bases:
>100_bases AGATACATTGCAATTACAAGGTATGCGAGATAAAACAAAAGTGTATGACCAATGTATCCAAATAGGCAGTGGAAGATTGA AACAATAGTAGGTGATTAAA
Downstream 100 bases:
>100_bases GAGGTGGCAATAATATGGGATTACCTTCCTATGTAGTCAACTTTGATGAACTATCAGATCTTATTAAAGATTATTTACAA AATGGTGTGAAAGTTGACAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MAHMGYKNFREPVVYILNQELRKRNFKNQINTNEDSKYAGELPEYPCRIIRDSNNKAYKFIYASGTDMQWQEELIRNAEG KVYRIKTTYPNNTNKTIQLIKDNHGKLETIDYV
Sequences:
>Translated_113_residues MAHMGYKNFREPVVYILNQELRKRNFKNQINTNEDSKYAGELPEYPCRIIRDSNNKAYKFIYASGTDMQWQEELIRNAEG KVYRIKTTYPNNTNKTIQLIKDNHGKLETIDYV >Mature_112_residues AHMGYKNFREPVVYILNQELRKRNFKNQINTNEDSKYAGELPEYPCRIIRDSNNKAYKFIYASGTDMQWQEELIRNAEGK VYRIKTTYPNNTNKTIQLIKDNHGKLETIDYV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13455; Mature: 13324
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHMGYKNFREPVVYILNQELRKRNFKNQINTNEDSKYAGELPEYPCRIIRDSNNKAYKF CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEE IYASGTDMQWQEELIRNAEGKVYRIKTTYPNNTNKTIQLIKDNHGKLETIDYV EEECCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEECCC >Mature Secondary Structure AHMGYKNFREPVVYILNQELRKRNFKNQINTNEDSKYAGELPEYPCRIIRDSNNKAYKF CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEE IYASGTDMQWQEELIRNAEGKVYRIKTTYPNNTNKTIQLIKDNHGKLETIDYV EEECCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA