| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is 148380426
Identifier: 148380426
GI number: 148380426
Start: 2605084
End: 2606169
Strand: Reverse
Name: 148380426
Synonym: CBO2470
Alternate gene names: NA
Gene position: 2606169-2605084 (Counterclockwise)
Preceding gene: 148380427
Following gene: 148380425
Centisome position: 67.05
GC content: 34.07
Gene sequence:
>1086_bases ATGAGTTTCGAATTACCAAAATTTACGCCACCAGATTTTACACAAGATTTTCTTGTTAAAGCACCGGATTGTAAAACTGA AGAGGTAGTTATAGAAGGAGTTGCTCCTAGACACTACCACGCTTTATCAATATATCCTGAATATTTTAAAATTAAAGGAA AATGGGTAATAGCTAACGAAAGCCGTATGGATACTGTTGCAATTGTTACACCAGAGGATGATATAGAAGTTGTAGAATTT AGAAATCTTAAACTTGGAGATAAAGTTGTAGTAGGAAGAACTGAAGATGCCAGCGAAGGTATATACATGTATGCTGGAGG ATTCGTAGCTAAAGATGGAAATTCAGATACTTTTGCATTCAGAAGTGGTAGATCAAGAGAAACAGCTTTCTCTAAAGATT ATGATGATTTGTATGAAATAATGAAATATGAAAAAGAACATAACGGAAAAATCACTTGGGTTTTAGGACCATCAATTGCA TTAGATGATGAATCAAGAGCAGCTTTTGCTTCCCTTGTAGAAAACGGATACGTTAATGCTATTTTATCTGGAAACACTCT TGCAACCTATGACTTAGAAAAAGGAATGTTCGGAACAGTTTTAGGACAAGAAACTTTTGAAGCTGAAAAAAATGCTCACT ATAACTATATGGAAGCTATAAACGAAGCTAGAAGAGCTGGTTCATTAGAAGAACTTATGGCTTCTGGAAAAGTTAAAGAT GGTATATTAAAGGCTTGTGTAGAGAAAGATGTTCCTGTAGTACTTGCTGGTACTATAAGAGATAGATTCACTCTACCTAA CGTTTATGATAATGTATATGAAGCCCAAGATGCTATGAGAAAACATACAAGAAAGTCTACAATGCTTATATGTTTGTCTA CAGTACTACATACTATAGCTTCAGGAAACATGACTCCATCTTACACAGTAAGAGATGGCGTTGTTAGACCTGTGTATATC TACTCTATAGATATACAAGAATTCTCAGTTAATAAGCTATCAGATAGAGGTACCCTAGAAGTTAAAACTCTAGTTACAAA TGCTCAAGACTTTATTACAAATATAGCTAAAGCACTAGTTAAATAG
Upstream 100 bases:
>100_bases TTGTTAATGTTCAAAAGAACGTTCTTAAATAAGAAATTGTAAAGACTTAACTTTGAAAATTGATAAGATACATTAATATA TTATTAGGAGGAGATTTTAA
Downstream 100 bases:
>100_bases TATATAAAAAATTTTTTTATATACTAAATACTAAATTTCATAAATTTTCGTAAAAAAGAGAGTCTTTTTAAAGATTCTCT TTTTTTATTGTACAGGAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MSFELPKFTPPDFTQDFLVKAPDCKTEEVVIEGVAPRHYHALSIYPEYFKIKGKWVIANESRMDTVAIVTPEDDIEVVEF RNLKLGDKVVVGRTEDASEGIYMYAGGFVAKDGNSDTFAFRSGRSRETAFSKDYDDLYEIMKYEKEHNGKITWVLGPSIA LDDESRAAFASLVENGYVNAILSGNTLATYDLEKGMFGTVLGQETFEAEKNAHYNYMEAINEARRAGSLEELMASGKVKD GILKACVEKDVPVVLAGTIRDRFTLPNVYDNVYEAQDAMRKHTRKSTMLICLSTVLHTIASGNMTPSYTVRDGVVRPVYI YSIDIQEFSVNKLSDRGTLEVKTLVTNAQDFITNIAKALVK
Sequences:
>Translated_361_residues MSFELPKFTPPDFTQDFLVKAPDCKTEEVVIEGVAPRHYHALSIYPEYFKIKGKWVIANESRMDTVAIVTPEDDIEVVEF RNLKLGDKVVVGRTEDASEGIYMYAGGFVAKDGNSDTFAFRSGRSRETAFSKDYDDLYEIMKYEKEHNGKITWVLGPSIA LDDESRAAFASLVENGYVNAILSGNTLATYDLEKGMFGTVLGQETFEAEKNAHYNYMEAINEARRAGSLEELMASGKVKD GILKACVEKDVPVVLAGTIRDRFTLPNVYDNVYEAQDAMRKHTRKSTMLICLSTVLHTIASGNMTPSYTVRDGVVRPVYI YSIDIQEFSVNKLSDRGTLEVKTLVTNAQDFITNIAKALVK >Mature_360_residues SFELPKFTPPDFTQDFLVKAPDCKTEEVVIEGVAPRHYHALSIYPEYFKIKGKWVIANESRMDTVAIVTPEDDIEVVEFR NLKLGDKVVVGRTEDASEGIYMYAGGFVAKDGNSDTFAFRSGRSRETAFSKDYDDLYEIMKYEKEHNGKITWVLGPSIAL DDESRAAFASLVENGYVNAILSGNTLATYDLEKGMFGTVLGQETFEAEKNAHYNYMEAINEARRAGSLEELMASGKVKDG ILKACVEKDVPVVLAGTIRDRFTLPNVYDNVYEAQDAMRKHTRKSTMLICLSTVLHTIASGNMTPSYTVRDGVVRPVYIY SIDIQEFSVNKLSDRGTLEVKTLVTNAQDFITNIAKALVK
Specific function: Unknown
COG id: COG1915
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005239 - InterPro: IPR007545 [H]
Pfam domain/function: PF04455 Saccharop_dh_N [H]
EC number: NA
Molecular weight: Translated: 40354; Mature: 40223
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFELPKFTPPDFTQDFLVKAPDCKTEEVVIEGVAPRHYHALSIYPEYFKIKGKWVIANE CCCCCCCCCCCCCCHHHEEECCCCCCCEEEEECCCCCCEEEEEECCCCEEEEEEEEEECC SRMDTVAIVTPEDDIEVVEFRNLKLGDKVVVGRTEDASEGIYMYAGGFVAKDGNSDTFAF CCCCEEEEECCCCCEEEEEEECCCCCCEEEEECCCCCCCCEEEEECCEEEECCCCCEEEE RSGRSRETAFSKDYDDLYEIMKYEKEHNGKITWVLGPSIALDDESRAAFASLVENGYVNA ECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCEEECCCHHHHHHHHHHCCCEEE ILSGNTLATYDLEKGMFGTVLGQETFEAEKNAHYNYMEAINEARRAGSLEELMASGKVKD EEECCEEEEEECCCCCEEHHHCCHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHCCCCHH GILKACVEKDVPVVLAGTIRDRFTLPNVYDNVYEAQDAMRKHTRKSTMLICLSTVLHTIA HHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGNMTPSYTVRDGVVRPVYIYSIDIQEFSVNKLSDRGTLEVKTLVTNAQDFITNIAKALV CCCCCCCEEECCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEEEHHCHHHHHHHHHHHHC K C >Mature Secondary Structure SFELPKFTPPDFTQDFLVKAPDCKTEEVVIEGVAPRHYHALSIYPEYFKIKGKWVIANE CCCCCCCCCCCCCHHHEEECCCCCCCEEEEECCCCCCEEEEEECCCCEEEEEEEEEECC SRMDTVAIVTPEDDIEVVEFRNLKLGDKVVVGRTEDASEGIYMYAGGFVAKDGNSDTFAF CCCCEEEEECCCCCEEEEEEECCCCCCEEEEECCCCCCCCEEEEECCEEEECCCCCEEEE RSGRSRETAFSKDYDDLYEIMKYEKEHNGKITWVLGPSIALDDESRAAFASLVENGYVNA ECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCEEECCCHHHHHHHHHHCCCEEE ILSGNTLATYDLEKGMFGTVLGQETFEAEKNAHYNYMEAINEARRAGSLEELMASGKVKD EEECCEEEEEECCCCCEEHHHCCHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHCCCCHH GILKACVEKDVPVVLAGTIRDRFTLPNVYDNVYEAQDAMRKHTRKSTMLICLSTVLHTIA HHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGNMTPSYTVRDGVVRPVYIYSIDIQEFSVNKLSDRGTLEVKTLVTNAQDFITNIAKALV CCCCCCCEEECCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEEEHHCHHHHHHHHHHHHC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11930014 [H]