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The map label for this gene is yhcC [C]

Identifier: 148380411

GI number: 148380411

Start: 2587061

End: 2588152

Strand: Reverse

Name: yhcC [C]

Synonym: CBO2453

Alternate gene names: 148380411

Gene position: 2588152-2587061 (Counterclockwise)

Preceding gene: 148380412

Following gene: 148380410

Centisome position: 66.59

GC content: 28.85

Gene sequence:

>1092_bases
ATGAGTAAAAGCTATTATATAATACCAATATTCGTTGCTCAGGAAGGATGTCCACATAATTGTGTTTTTTGTAATCAATA
TAAAATAACCGGGGAAAAGGATGAAATGATAGACGAAAATTATGTGAGAGAAACCATAGAAGCTTATATAAAGACTATAG
ATAGAGAAAATTCAACTTTAGAGGTTTCTTTTTTTGGAGGTACTTTTACAGGTATACCTATAGAAAAACAAAAAAGTCTT
TTAAAAGTAGCAAAGGAATATAAGGATAAGGGCCAAATAGATTATATACATATGTCCACAAGACCAGATTATATAGACAG
AGAAATTTTAGATAATCTTAAAGAATACTCTGCGGATATAATTGAATTAGGAGTTCAATCTTTAGATGATGAAGTTCTTT
TAAAATCAGGAAGAGGACATTCTGTAGAAGAGGTACATAGAGCTTCAAAGCTTATAAGAGAATACGGATTTACTTTGGGA
CATCAAATAATGTTAGGACTTCCGGGAGATACTTTTAAAAAGGATATAGAAACGGTAGCAAAATCTTTAGAGATGGAACC
AGACATAGCAAGAATATACCCAGCCTTAGTAATAAAGGACACTCCTATGGAAGATATGTTAAAAAAGGGAACCTATAAGC
CTTATACTTTAGATGAAGCTATAGATATAACTATGCTATTATATTCCATGTATGAAGAACAAGACGTAAAGGTAATAAGA
ATAGGACTTCAACCTACAGAAGAAATAAATGAAAATAAGGATGTGCTAGGAGGTCCTTTCCATCCAGCTTTTAGAGAATT
AGTGGAGGGAAAAATAATTAATGAGGCTATTTTCTCTCATGTGGAAGATAGTTCAGAAGAAAATTTAGAAATTTATATAA
ATAATAAAGATATATCTAAATTGTATTGTAATAAAAAACAATTTTTCAATGAATTTATAGATAAAAAAAATGTGAAAAGA
TTTAAAGTTATACAAGATGAAACATTAAATAGAGGGAATATAATTATTAAAAAGGGTGAAAATCAAGAACATATATTTAT
AAAAGAGTATATGAGAAAGCTTTCAGAAGAAGGAAAAAACTTATTTATATAG

Upstream 100 bases:

>100_bases
ACCATAGATAATGAGGTAAGAGGAACTGGAATAGGCTATAGTAAAAAAGAAGCAGAACAAAACGCAGCAAGAGAAGCATT
AAAGAATTTAGGTGATAGCC

Downstream 100 bases:

>100_bases
AATAATATAAGTATCAAGTTAATATAAGCTTTAATGTCCCCACTGTTTCATATTCAGTGGGGATATATATTTTAAGTTTT
ACTAATTGATATTTTTTTTT

Product: radical SAM domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 362

Protein sequence:

>363_residues
MSKSYYIIPIFVAQEGCPHNCVFCNQYKITGEKDEMIDENYVRETIEAYIKTIDRENSTLEVSFFGGTFTGIPIEKQKSL
LKVAKEYKDKGQIDYIHMSTRPDYIDREILDNLKEYSADIIELGVQSLDDEVLLKSGRGHSVEEVHRASKLIREYGFTLG
HQIMLGLPGDTFKKDIETVAKSLEMEPDIARIYPALVIKDTPMEDMLKKGTYKPYTLDEAIDITMLLYSMYEEQDVKVIR
IGLQPTEEINENKDVLGGPFHPAFRELVEGKIINEAIFSHVEDSSEENLEIYINNKDISKLYCNKKQFFNEFIDKKNVKR
FKVIQDETLNRGNIIIKKGENQEHIFIKEYMRKLSEEGKNLFI

Sequences:

>Translated_363_residues
MSKSYYIIPIFVAQEGCPHNCVFCNQYKITGEKDEMIDENYVRETIEAYIKTIDRENSTLEVSFFGGTFTGIPIEKQKSL
LKVAKEYKDKGQIDYIHMSTRPDYIDREILDNLKEYSADIIELGVQSLDDEVLLKSGRGHSVEEVHRASKLIREYGFTLG
HQIMLGLPGDTFKKDIETVAKSLEMEPDIARIYPALVIKDTPMEDMLKKGTYKPYTLDEAIDITMLLYSMYEEQDVKVIR
IGLQPTEEINENKDVLGGPFHPAFRELVEGKIINEAIFSHVEDSSEENLEIYINNKDISKLYCNKKQFFNEFIDKKNVKR
FKVIQDETLNRGNIIIKKGENQEHIFIKEYMRKLSEEGKNLFI
>Mature_362_residues
SKSYYIIPIFVAQEGCPHNCVFCNQYKITGEKDEMIDENYVRETIEAYIKTIDRENSTLEVSFFGGTFTGIPIEKQKSLL
KVAKEYKDKGQIDYIHMSTRPDYIDREILDNLKEYSADIIELGVQSLDDEVLLKSGRGHSVEEVHRASKLIREYGFTLGH
QIMLGLPGDTFKKDIETVAKSLEMEPDIARIYPALVIKDTPMEDMLKKGTYKPYTLDEAIDITMLLYSMYEEQDVKVIRI
GLQPTEEINENKDVLGGPFHPAFRELVEGKIINEAIFSHVEDSSEENLEIYINNKDISKLYCNKKQFFNEFIDKKNVKRF
KVIQDETLNRGNIIIKKGENQEHIFIKEYMRKLSEEGKNLFI

Specific function: Unknown

COG id: COG1243

COG function: function code KB; Histone acetyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

Organism=Homo sapiens, GI23510283, Length=269, Percent_Identity=24.1635687732342, Blast_Score=81, Evalue=1e-15,
Organism=Escherichia coli, GI2367204, Length=196, Percent_Identity=23.469387755102, Blast_Score=69, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI133955098, Length=269, Percent_Identity=23.0483271375465, Blast_Score=75, Evalue=8e-14,
Organism=Saccharomyces cerevisiae, GI6325171, Length=138, Percent_Identity=31.1594202898551, Blast_Score=80, Evalue=7e-16,
Organism=Drosophila melanogaster, GI19920684, Length=269, Percent_Identity=24.5353159851301, Blast_Score=78, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181
- InterPro:   IPR006638
- InterPro:   IPR005910
- InterPro:   IPR007197 [H]

Pfam domain/function: PF00583 Acetyltransf_1; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 42106; Mature: 41975

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKSYYIIPIFVAQEGCPHNCVFCNQYKITGEKDEMIDENYVRETIEAYIKTIDRENSTL
CCCCEEEEEEEEECCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEE
EVSFFGGTFTGIPIEKQKSLLKVAKEYKDKGQIDYIHMSTRPDYIDREILDNLKEYSADI
EEEEECCEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHH
IELGVQSLDDEVLLKSGRGHSVEEVHRASKLIREYGFTLGHQIMLGLPGDTFKKDIETVA
HHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHH
KSLEMEPDIARIYPALVIKDTPMEDMLKKGTYKPYTLDEAIDITMLLYSMYEEQDVKVIR
HHCCCCCCHHHHCHHHEEECCCHHHHHHCCCCCCEECHHHHHHHHHHHHHHCCCCCEEEE
IGLQPTEEINENKDVLGGPFHPAFRELVEGKIINEAIFSHVEDSSEENLEIYINNKDISK
ECCCCHHHHCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHH
LYCNKKQFFNEFIDKKNVKRFKVIQDETLNRGNIIIKKGENQEHIFIKEYMRKLSEEGKN
HHHCHHHHHHHHHHHCCCHHEEEEHHCCCCCCCEEEEECCCCCEEHHHHHHHHHHHCCCC
LFI
CCC
>Mature Secondary Structure 
SKSYYIIPIFVAQEGCPHNCVFCNQYKITGEKDEMIDENYVRETIEAYIKTIDRENSTL
CCCEEEEEEEEECCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCEE
EVSFFGGTFTGIPIEKQKSLLKVAKEYKDKGQIDYIHMSTRPDYIDREILDNLKEYSADI
EEEEECCEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHH
IELGVQSLDDEVLLKSGRGHSVEEVHRASKLIREYGFTLGHQIMLGLPGDTFKKDIETVA
HHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHH
KSLEMEPDIARIYPALVIKDTPMEDMLKKGTYKPYTLDEAIDITMLLYSMYEEQDVKVIR
HHCCCCCCHHHHCHHHEEECCCHHHHHHCCCCCCEECHHHHHHHHHHHHHHCCCCCEEEE
IGLQPTEEINENKDVLGGPFHPAFRELVEGKIINEAIFSHVEDSSEENLEIYINNKDISK
ECCCCHHHHCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEECCCCHHH
LYCNKKQFFNEFIDKKNVKRFKVIQDETLNRGNIIIKKGENQEHIFIKEYMRKLSEEGKN
HHHCHHHHHHHHHHHCCCHHEEEEHHCCCCCCCEEEEECCCCCEEHHHHHHHHHHHCCCC
LFI
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]