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The map label for this gene is 148379680

Identifier: 148379680

GI number: 148379680

Start: 1840424

End: 1840858

Strand: Direct

Name: 148379680

Synonym: CBO1721

Alternate gene names: NA

Gene position: 1840424-1840858 (Clockwise)

Preceding gene: 148379679

Following gene: 148379681

Centisome position: 47.35

GC content: 31.26

Gene sequence:

>435_bases
GTGAAGCTAACACCAAAACAAAAGGCATTTGCTGATTATTATATACAAACAGGCAATGCCACAGAAGCAGCCATTAAAGC
TGGATATAGTAAAAAGACAGCAAGATTTATAGGAAATGAAAACTTAACAAAACTTTACATCAAAAACTATATTGATGAAA
GAATGAAACAATTAGAGGATGAAAGAATAGCTAAAGCGAATGAAGTTCTTCAATATCTCACAAGAGTTATAAGAGGGCAA
GAAACCGAGGAAGTAGTAGTAACTGAAAATATAGGAGATTTTATGAGTGAAGCTAAAACAATAAAAAAAGAAATAGGAGC
TAAAGATAGAATAAAAGCTGCTGAATTATTAGGTAAAAGGTATAGACTATTCACTGATAAAGTTGAAATAGAGGGTTCTG
TTCCAGTGCAAATAGTAGATGATATAGATGAATAA

Upstream 100 bases:

>100_bases
GATGCTTTTGATTCATTCATAGAATACAAAGAAGAAAATAGAAAAAGTAAAAACAGTTAACAATATAAAGTTATTGGAAT
ACATAAAAGGAGGTGGCATT

Downstream 100 bases:

>100_bases
AATTAAGTTAAAATCAATAATAGCTTCTAGTTTTTATGAAGCACATAAAGATATTAAGAAGGGACTTCACACTCACTACT
GGTTCAAAGGTGGTAGAGGT

Product: terminase small subunit

Products: NA

Alternate protein names: Phage Terminase Small Subunit; Prophage; Prophage Lp2 Protein; Phage Terminase Family Protein; Phage Terminase; Terminase Subunit; Terminase Superantigen-Encoding Pathogenicity Islands SaPI; Phage-Related Terminase Small Subunit; Terminase Small Subunit G1p

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MKLTPKQKAFADYYIQTGNATEAAIKAGYSKKTARFIGNENLTKLYIKNYIDERMKQLEDERIAKANEVLQYLTRVIRGQ
ETEEVVVTENIGDFMSEAKTIKKEIGAKDRIKAAELLGKRYRLFTDKVEIEGSVPVQIVDDIDE

Sequences:

>Translated_144_residues
MKLTPKQKAFADYYIQTGNATEAAIKAGYSKKTARFIGNENLTKLYIKNYIDERMKQLEDERIAKANEVLQYLTRVIRGQ
ETEEVVVTENIGDFMSEAKTIKKEIGAKDRIKAAELLGKRYRLFTDKVEIEGSVPVQIVDDIDE
>Mature_144_residues
MKLTPKQKAFADYYIQTGNATEAAIKAGYSKKTARFIGNENLTKLYIKNYIDERMKQLEDERIAKANEVLQYLTRVIRGQ
ETEEVVVTENIGDFMSEAKTIKKEIGAKDRIKAAELLGKRYRLFTDKVEIEGSVPVQIVDDIDE

Specific function: Unknown

COG id: COG3728

COG function: function code L; Phage terminase, small subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16468; Mature: 16468

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTPKQKAFADYYIQTGNATEAAIKAGYSKKTARFIGNENLTKLYIKNYIDERMKQLED
CCCCCCHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
ERIAKANEVLQYLTRVIRGQETEEVVVTENIGDFMSEAKTIKKEIGAKDRIKAAELLGKR
HHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
YRLFTDKVEIEGSVPVQIVDDIDE
HHHHHHCEEECCCCCEEECCCCCC
>Mature Secondary Structure
MKLTPKQKAFADYYIQTGNATEAAIKAGYSKKTARFIGNENLTKLYIKNYIDERMKQLED
CCCCCCHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
ERIAKANEVLQYLTRVIRGQETEEVVVTENIGDFMSEAKTIKKEIGAKDRIKAAELLGKR
HHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
YRLFTDKVEIEGSVPVQIVDDIDE
HHHHHHCEEECCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA