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The map label for this gene is atpC

Identifier: 148361321

GI number: 148361321

Start: 3551497

End: 3551919

Strand: Reverse

Name: atpC

Synonym: LPC_3296

Alternate gene names: 148361321

Gene position: 3551919-3551497 (Counterclockwise)

Preceding gene: 148361322

Following gene: 148361320

Centisome position: 99.31

GC content: 44.92

Gene sequence:

>423_bases
ATGAGTATTACAACGCACTTGGATATTGTTAGTGCAGAGCATGAAATTTTCTCTGGTGTGGTGGAAATGGTAGTTGCAAC
TGGAGAATTGGGTGAAATTGGAATTACTCCTGGGCATGCTCCATTACTAACTGTGCTAAGGCCGGGTGAAGTTAGAATTA
CTTTGCAAGGTGGTACACAGGACATATACTATGTGCAGGGTGGAATGCTTGAGGTTCAGCCTCACTGCGTAACAATTCTT
GCTGATGTGGCAGAACGAGCCGAGCACTTGGATGAAGCTGCTGCATTGGCAGCTAAAGCGAAAGCTGAAGCCGCTATAGC
CAGTAAAGGAGGCGATATTGATTACTCTGTTGCTGCAGCAGAATTGGCCAGAGCTGTCGCTCAAATAAGAGCAATTCAAA
AGACCAGGAAAAAAATGAAGTAA

Upstream 100 bases:

>100_bases
TTGCCGGTGAATATGATGATTTGCCTGAACAGGCATTTTATATGGTTGGAAGCATCGAGGAAGCTGTTGCAAAAGCTAAA
ACCTTATGAGGCAAGATAAT

Downstream 100 bases:

>100_bases
GAGTTTCCTGTTTGTGGAAACTGCTTTGCTATGAATACTTTATACCCCTCTACAAAACGGGTTTCTTCCTGATAGGAAAA
ACCCGTGTTTTACTCTCTTA

Product: F0F1 ATP synthase subunit epsilon

Products: ATP; H+; H2O [C]

Alternate protein names: ATP synthase F1 sector epsilon subunit; F-ATPase epsilon subunit

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MSITTHLDIVSAEHEIFSGVVEMVVATGELGEIGITPGHAPLLTVLRPGEVRITLQGGTQDIYYVQGGMLEVQPHCVTIL
ADVAERAEHLDEAAALAAKAKAEAAIASKGGDIDYSVAAAELARAVAQIRAIQKTRKKMK

Sequences:

>Translated_140_residues
MSITTHLDIVSAEHEIFSGVVEMVVATGELGEIGITPGHAPLLTVLRPGEVRITLQGGTQDIYYVQGGMLEVQPHCVTIL
ADVAERAEHLDEAAALAAKAKAEAAIASKGGDIDYSVAAAELARAVAQIRAIQKTRKKMK
>Mature_139_residues
SITTHLDIVSAEHEIFSGVVEMVVATGELGEIGITPGHAPLLTVLRPGEVRITLQGGTQDIYYVQGGMLEVQPHCVTILA
DVAERAEHLDEAAALAAKAKAEAAIASKGGDIDYSVAAAELARAVAQIRAIQKTRKKMK

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane

COG id: COG0355

COG function: function code C; F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase epsilon chain family

Homologues:

Organism=Escherichia coli, GI1790169, Length=139, Percent_Identity=56.1151079136691, Blast_Score=160, Evalue=3e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPE_LEGPA (Q5X0P4)

Other databases:

- EMBL:   CR628336
- RefSeq:   YP_125354.1
- HSSP:   P0A6E6
- ProteinModelPortal:   Q5X0P4
- SMR:   Q5X0P4
- STRING:   Q5X0P4
- GeneID:   3117218
- GenomeReviews:   CR628336_GR
- KEGG:   lpp:lpp3052
- LegioList:   lpp3052
- eggNOG:   COG0355
- HOGENOM:   HBG663981
- OMA:   MAMTVHC
- ProtClustDB:   PRK00571
- BioCyc:   LPNE297246:LPP3052-MONOMER
- HAMAP:   MF_00530
- InterPro:   IPR001469
- InterPro:   IPR020547
- InterPro:   IPR020546
- Gene3D:   G3DSA:1.20.5.440
- Gene3D:   G3DSA:2.60.15.10
- PANTHER:   PTHR13822
- ProDom:   PD000944
- TIGRFAMs:   TIGR01216

Pfam domain/function: PF00401 ATP-synt_DE; PF02823 ATP-synt_DE_N; SSF46604 ATPsynt_DE; SSF51344 ATPsynt_DE

EC number: 3.6.3.14 [C]

Molecular weight: Translated: 14756; Mature: 14625

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSITTHLDIVSAEHEIFSGVVEMVVATGELGEIGITPGHAPLLTVLRPGEVRITLQGGTQ
CCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCEEEEEEECCCC
DIYYVQGGMLEVQPHCVTILADVAERAEHLDEAAALAAKAKAEAAIASKGGDIDYSVAAA
EEEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
ELARAVAQIRAIQKTRKKMK
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SITTHLDIVSAEHEIFSGVVEMVVATGELGEIGITPGHAPLLTVLRPGEVRITLQGGTQ
CCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCEEEEEEECCCC
DIYYVQGGMLEVQPHCVTILADVAERAEHLDEAAALAAKAKAEAAIASKGGDIDYSVAAA
EEEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
ELARAVAQIRAIQKTRKKMK
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ADP; H+; Phosphate [C]

Specific reaction: ADP + (4) H+ + Phosphate <==> ATP + (3) H+ + H2O [C]

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA