Click here to switch to the map view.

The map label for this gene is 148361311

Identifier: 148361311

GI number: 148361311

Start: 3535751

End: 3536533

Strand: Reverse

Name: 148361311

Synonym: LPC_3285

Alternate gene names: NA

Gene position: 3536533-3535751 (Counterclockwise)

Preceding gene: 148361314

Following gene: 148361310

Centisome position: 98.88

GC content: 36.4

Gene sequence:

>783_bases
TTGTTACTCAAATGCATAGAAAAATTAATTGATGGGTATTTTGCTGTAATTCCCAGGCACGCACCGGAATTTGAAAATAT
CAACGGTGCGTTAGTAATCGCTCATAGAGGAGCTCATAATAATGCAAGAGGGATAATTGAAAACACTCTGGAAGCATTTC
AGAACGCAAAAGAGGCCGGATGTTGGGGAGTTGAACTGGATGTACACCTCACTAAGGATAAGGTGTTCATTGTTAATCAT
GATCCTACCTTAAATCGATTATGGAACAAGGACATTGCTATCAGCGATCTGAGTTTTAGCGAGTTACGGGCATTGGAGTG
CAGAATCCCGTCCCTCTCTGAAGTAGTGCGTCAGTTTGGGAATTCCATGCATTTATTTATTGAATTAAAAACAGCTGTTG
AGGAGGAAGAGATATTAGTGCAAACACTGCAACATTTAACGCCATGTAAAGACTTTCATTTATTGACTTTGCAGGAATCT
ACCTTTAAAAAATTGTGTTCTTTTCCTAGGCAATCTTTATTGCTTGTTGCAGTGCATAATAACGTTAAGAAATTTTGTGA
ATTAAGCATTAAGGAGGGGTATGGAGGCGTACTGGGTAATTATTTATTATTGACTAATAGGGTATTAAAATATTTACAAG
ATGCCAATCAACATTTTGGCGTGGGATTTGTTGATTCCAAAAACAGTCTGTATAGAGAATTAAATAGAGGGGTTAAATGG
CTCTTTACTAATGAGGCAATAACCATTAATCAGTATTTAAATGACTTAAAAAATAGAATGTAG

Upstream 100 bases:

>100_bases
AGTTTAGTCGATTTTTGCGATTTTGTGCTAATAGCGTATTTTGCCTTTTATTTTATGCCGGCATAAAATGATTAAAATTG
GACTATTAGGATAATTGGTT

Downstream 100 bases:

>100_bases
CTATTTTGATAATGGCTCCTACCCGTTTTTGACAATTCAATAATCATCACATAGTCTTAAATTAACAGTTCTATTTTATC
ATGTAGCAAGGATTAGTACC

Product: glycerophosphoryl diester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphoryl Diester Phosphodiesterase Family Protein; Glycerophosphodiester Phosphodiesterase

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MLLKCIEKLIDGYFAVIPRHAPEFENINGALVIAHRGAHNNARGIIENTLEAFQNAKEAGCWGVELDVHLTKDKVFIVNH
DPTLNRLWNKDIAISDLSFSELRALECRIPSLSEVVRQFGNSMHLFIELKTAVEEEEILVQTLQHLTPCKDFHLLTLQES
TFKKLCSFPRQSLLLVAVHNNVKKFCELSIKEGYGGVLGNYLLLTNRVLKYLQDANQHFGVGFVDSKNSLYRELNRGVKW
LFTNEAITINQYLNDLKNRM

Sequences:

>Translated_260_residues
MLLKCIEKLIDGYFAVIPRHAPEFENINGALVIAHRGAHNNARGIIENTLEAFQNAKEAGCWGVELDVHLTKDKVFIVNH
DPTLNRLWNKDIAISDLSFSELRALECRIPSLSEVVRQFGNSMHLFIELKTAVEEEEILVQTLQHLTPCKDFHLLTLQES
TFKKLCSFPRQSLLLVAVHNNVKKFCELSIKEGYGGVLGNYLLLTNRVLKYLQDANQHFGVGFVDSKNSLYRELNRGVKW
LFTNEAITINQYLNDLKNRM
>Mature_260_residues
MLLKCIEKLIDGYFAVIPRHAPEFENINGALVIAHRGAHNNARGIIENTLEAFQNAKEAGCWGVELDVHLTKDKVFIVNH
DPTLNRLWNKDIAISDLSFSELRALECRIPSLSEVVRQFGNSMHLFIELKTAVEEEEILVQTLQHLTPCKDFHLLTLQES
TFKKLCSFPRQSLLLVAVHNNVKKFCELSIKEGYGGVLGNYLLLTNRVLKYLQDANQHFGVGFVDSKNSLYRELNRGVKW
LFTNEAITINQYLNDLKNRM

Specific function: Unknown

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29723; Mature: 29723

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLKCIEKLIDGYFAVIPRHAPEFENINGALVIAHRGAHNNARGIIENTLEAFQNAKEAG
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCHHHCC
CWGVELDVHLTKDKVFIVNHDPTLNRLWNKDIAISDLSFSELRALECRIPSLSEVVRQFG
CEEEEEEEEEECCEEEEEECCCHHHHHCCCCCEEECCCHHHHHHHHCCCCCHHHHHHHHC
NSMHLFIELKTAVEEEEILVQTLQHLTPCKDFHLLTLQESTFKKLCSFPRQSLLLVAVHN
CCEEEEEEEEHHCCHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHCCCHHEEEEEEHH
NVKKFCELSIKEGYGGVLGNYLLLTNRVLKYLQDANQHFGVGFVDSKNSLYRELNRGVKW
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCEE
LFTNEAITINQYLNDLKNRM
EEECCCEEHHHHHHHHHHCC
>Mature Secondary Structure
MLLKCIEKLIDGYFAVIPRHAPEFENINGALVIAHRGAHNNARGIIENTLEAFQNAKEAG
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCHHHCC
CWGVELDVHLTKDKVFIVNHDPTLNRLWNKDIAISDLSFSELRALECRIPSLSEVVRQFG
CEEEEEEEEEECCEEEEEECCCHHHHHCCCCCEEECCCHHHHHHHHCCCCCHHHHHHHHC
NSMHLFIELKTAVEEEEILVQTLQHLTPCKDFHLLTLQESTFKKLCSFPRQSLLLVAVHN
CCEEEEEEEEHHCCHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHCCCHHEEEEEEHH
NVKKFCELSIKEGYGGVLGNYLLLTNRVLKYLQDANQHFGVGFVDSKNSLYRELNRGVKW
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHCCCEE
LFTNEAITINQYLNDLKNRM
EEECCCEEHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA