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The map label for this gene is grlA [H]

Identifier: 148361307

GI number: 148361307

Start: 3532244

End: 3532561

Strand: Reverse

Name: grlA [H]

Synonym: LPC_3281

Alternate gene names: 148361307

Gene position: 3532561-3532244 (Counterclockwise)

Preceding gene: 148361310

Following gene: 148361306

Centisome position: 98.77

GC content: 42.77

Gene sequence:

>318_bases
GTGGATACTTTAGAAAAGATTAAAAAGCAAATTGCTGAAAATGCGATAATGCTCTATATGAAAGGCACTCCGAAGATGCC
TCAATGCGGGTTTTCCGCTCGTGCTGTTCAGTGTATCGAGGCTTGTGGAGTAGACTTTGCTTATGTCGATATCCTTGCCA
ATCCTGATATTCGTCAAGTTTTGCCCCAATTTTCTGACTGGCCTACCTTTCCTCAACTTTATGTGAAAGGGGAATTAATT
GGAGGATCTGACATCATAGCCGAAATGTTTCAGCAAGGAGAGTTAGAGCCTATGTTGCGTGATGCAGTAGCGGCATAA

Upstream 100 bases:

>100_bases
ATAAGAAAAAGATTGATAGGATTATCACAATAGAATCATTAGTTGCGACCTTGTTTGGTTTTCGACATAATTGGGTTTTT
TATTTTATAAAAGGTGCATA

Downstream 100 bases:

>100_bases
TTTTAATAACAATTGTGGGATTTACTCACCCACCGCTAATGGAGATAATAGAATGAGTGTCTTAGTTGGGCGTAAAGCAC
CTGATTTTACTGTGGCTGCA

Product: glutaredoxin-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MDTLEKIKKQIAENAIMLYMKGTPKMPQCGFSARAVQCIEACGVDFAYVDILANPDIRQVLPQFSDWPTFPQLYVKGELI
GGSDIIAEMFQQGELEPMLRDAVAA

Sequences:

>Translated_105_residues
MDTLEKIKKQIAENAIMLYMKGTPKMPQCGFSARAVQCIEACGVDFAYVDILANPDIRQVLPQFSDWPTFPQLYVKGELI
GGSDIIAEMFQQGELEPMLRDAVAA
>Mature_105_residues
MDTLEKIKKQIAENAIMLYMKGTPKMPQCGFSARAVQCIEACGVDFAYVDILANPDIRQVLPQFSDWPTFPQLYVKGELI
GGSDIIAEMFQQGELEPMLRDAVAA

Specific function: Unknown

COG id: COG0278

COG function: function code O; Glutaredoxin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutaredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI95113651, Length=96, Percent_Identity=44.7916666666667, Blast_Score=100, Evalue=3e-22,
Organism=Homo sapiens, GI42516576, Length=97, Percent_Identity=40.2061855670103, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1787943, Length=102, Percent_Identity=63.7254901960784, Blast_Score=150, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI71988153, Length=84, Percent_Identity=42.8571428571429, Blast_Score=90, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI71988159, Length=80, Percent_Identity=42.5, Blast_Score=86, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17556042, Length=95, Percent_Identity=35.7894736842105, Blast_Score=81, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6325198, Length=101, Percent_Identity=43.5643564356436, Blast_Score=94, Evalue=5e-21,
Organism=Saccharomyces cerevisiae, GI6321022, Length=77, Percent_Identity=49.3506493506493, Blast_Score=92, Evalue=1e-20,
Organism=Saccharomyces cerevisiae, GI6320303, Length=87, Percent_Identity=44.8275862068966, Blast_Score=91, Evalue=4e-20,
Organism=Drosophila melanogaster, GI19921242, Length=96, Percent_Identity=43.75, Blast_Score=96, Evalue=4e-21,
Organism=Drosophila melanogaster, GI24642023, Length=94, Percent_Identity=40.4255319148936, Blast_Score=93, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002109
- InterPro:   IPR014434
- InterPro:   IPR004480
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00462 Glutaredoxin [H]

EC number: NA

Molecular weight: Translated: 11671; Mature: 11671

Theoretical pI: Translated: 4.28; Mature: 4.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTLEKIKKQIAENAIMLYMKGTPKMPQCGFSARAVQCIEACGVDFAYVDILANPDIRQV
CCHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHEEEECCCCHHHH
LPQFSDWPTFPQLYVKGELIGGSDIIAEMFQQGELEPMLRDAVAA
CCCCCCCCCCCCEEEECEECCCHHHHHHHHHCCCCCHHHHHHHCC
>Mature Secondary Structure
MDTLEKIKKQIAENAIMLYMKGTPKMPQCGFSARAVQCIEACGVDFAYVDILANPDIRQV
CCHHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHEEEECCCCHHHH
LPQFSDWPTFPQLYVKGELIGGSDIIAEMFQQGELEPMLRDAVAA
CCCCCCCCCCCCEEEECEECCCHHHHHHHHHCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA