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The map label for this gene is yqeZ [H]

Identifier: 148361299

GI number: 148361299

Start: 3523024

End: 3524529

Strand: Reverse

Name: yqeZ [H]

Synonym: LPC_3273

Alternate gene names: 148361299

Gene position: 3524529-3523024 (Counterclockwise)

Preceding gene: 148361300

Following gene: 148361298

Centisome position: 98.55

GC content: 40.84

Gene sequence:

>1506_bases
ATGCATCGGGATTGCGTCAGACAAGAGGGACTGTACAAACTCAATAATCTTTTTTGCAAATGGGCTGCGGTGATAAGAGG
TCTGCAAGGAATAATATTCAGAAGCAGACTATCTGTGTCAGTTCTTGAGGATTCAGATTCTGTAGCAACAAAACAATCCC
AGCTATCGGTAACGTGCGAAATGAAACTCAGTAAATTCATGCAAACAAGTTGTATTTTTATATTCCTTACCCTGTTCCTT
TTGGTTGGATTGCAAACTTCATTTGCAGCAAAAATTGTAGAGTTGAATATAAAAGGACCAATCGGCCCTGCGACAGCAGA
TTATTTGGAAAGAGGTATTAAAAGCGCTCAAGACGCTGATTTGATAGTGATTCTAATCGATACACCAGGCGGTTTATATG
ATTCAACACGAAATATCATTCAGCTATTCTTACTTTCTGATGTGCCCATAGTGACTTATGTAAGTCCTACTGGAGCAAGG
GCTGCAAGTGCTGGAACCTATTTAATGTATGCGAGTACATTAGCGGCAATGGCGCCTGGTACCCAAATGGGGGCTGCAAG
TCCTGTCAGTCTTGGCACAGGATTCAGTGAAGGTGAAAAAGATGAGAAAAAAAAATCAACCATGGAAAATAAGGTAACTC
ATGATGCTGTAGCAACAATAAGGTCACTTGCTCAACTGAGAGGGCGCGATCCTGATTTTGCTGAAAAGGCAGTGACAGAA
GGCAAATCCATAACAGCGAATGAAGCCCTCAGCAAGGGAGTGGTCAATTATATTGCAAAAAATAGAGATGATTTACTGTC
CCAAATCCATGGAATAAAAGTCAGTCAAAATAACAAGACAATAACTATTAATACCGAAAGCCCTGACATTCAAGTAATCA
ATCCAGATTGGAGAACCCGTTTTCTATCAGTCATTACCAACCCTACAGTGGCTTACTTATTATTGCTACTTGGAATTTAT
GGAATTTTCTTTGAATTGGTTAATCCAGGTTATGTTTTACCTGGAGTAGTTGGCGCAGTTTCAATGCTTTTTGCGCTGTA
TGCGCTGCAGCTGTTACCTATAAATTATGCAGGTTTGGGCTTGATTATTTTAGGTATTTTATTTGTCATAGCCGAGGCAT
TTACCCCAAGTTTTGGAGCGTTAGGTGTAGGAGGAACTGTTTCTTTTATTTTAGGTTCCATTATGCTGATGAACACGGAG
CACCTGGCTTTCCAGATAGCGTGGTCAGCAATTTGGGCTATGGCAGTTCTTAATATATTGATTTTTGTTTTGGTTCTGGG
GATGTTAATTAAATCTCGAAACCAAAAAATCAGACATGGCCTGGAAACGTTGGTGGGTGCAAAAGGCAGGGCGTTAGGAG
ACATTAATCTGGAAGGCCAGGCTGTAATTAAGGGAGAGATTTGGAATGTCCATTCAAGCTCGCCAATCGCGGCAAATAAA
AGCGTTAAAGTCACGCGAGCATCAGGATTATTGTTGGAAGTGGAGGAAGATCAGTCGGTTTATTAG

Upstream 100 bases:

>100_bases
CAATAACAGATAAAGATCTTGAATTGGTGTGACACTCCCGCTTGTTTTTTCAACCTGTGCTATCTTTTATTTTATAACTA
CCTCTTAAAGGGATGTAAAA

Downstream 100 bases:

>100_bases
TTGGTTATTCCATGTTGAATGAAAAAGGATTAAGGAGAATGAGATGGGACCATTTCTGGTTATATTACTGGTAGCGATAG
GTTTGCTACTGGTTTCAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 501; Mature: 501

Protein sequence:

>501_residues
MHRDCVRQEGLYKLNNLFCKWAAVIRGLQGIIFRSRLSVSVLEDSDSVATKQSQLSVTCEMKLSKFMQTSCIFIFLTLFL
LVGLQTSFAAKIVELNIKGPIGPATADYLERGIKSAQDADLIVILIDTPGGLYDSTRNIIQLFLLSDVPIVTYVSPTGAR
AASAGTYLMYASTLAAMAPGTQMGAASPVSLGTGFSEGEKDEKKKSTMENKVTHDAVATIRSLAQLRGRDPDFAEKAVTE
GKSITANEALSKGVVNYIAKNRDDLLSQIHGIKVSQNNKTITINTESPDIQVINPDWRTRFLSVITNPTVAYLLLLLGIY
GIFFELVNPGYVLPGVVGAVSMLFALYALQLLPINYAGLGLIILGILFVIAEAFTPSFGALGVGGTVSFILGSIMLMNTE
HLAFQIAWSAIWAMAVLNILIFVLVLGMLIKSRNQKIRHGLETLVGAKGRALGDINLEGQAVIKGEIWNVHSSSPIAANK
SVKVTRASGLLLEVEEDQSVY

Sequences:

>Translated_501_residues
MHRDCVRQEGLYKLNNLFCKWAAVIRGLQGIIFRSRLSVSVLEDSDSVATKQSQLSVTCEMKLSKFMQTSCIFIFLTLFL
LVGLQTSFAAKIVELNIKGPIGPATADYLERGIKSAQDADLIVILIDTPGGLYDSTRNIIQLFLLSDVPIVTYVSPTGAR
AASAGTYLMYASTLAAMAPGTQMGAASPVSLGTGFSEGEKDEKKKSTMENKVTHDAVATIRSLAQLRGRDPDFAEKAVTE
GKSITANEALSKGVVNYIAKNRDDLLSQIHGIKVSQNNKTITINTESPDIQVINPDWRTRFLSVITNPTVAYLLLLLGIY
GIFFELVNPGYVLPGVVGAVSMLFALYALQLLPINYAGLGLIILGILFVIAEAFTPSFGALGVGGTVSFILGSIMLMNTE
HLAFQIAWSAIWAMAVLNILIFVLVLGMLIKSRNQKIRHGLETLVGAKGRALGDINLEGQAVIKGEIWNVHSSSPIAANK
SVKVTRASGLLLEVEEDQSVY
>Mature_501_residues
MHRDCVRQEGLYKLNNLFCKWAAVIRGLQGIIFRSRLSVSVLEDSDSVATKQSQLSVTCEMKLSKFMQTSCIFIFLTLFL
LVGLQTSFAAKIVELNIKGPIGPATADYLERGIKSAQDADLIVILIDTPGGLYDSTRNIIQLFLLSDVPIVTYVSPTGAR
AASAGTYLMYASTLAAMAPGTQMGAASPVSLGTGFSEGEKDEKKKSTMENKVTHDAVATIRSLAQLRGRDPDFAEKAVTE
GKSITANEALSKGVVNYIAKNRDDLLSQIHGIKVSQNNKTITINTESPDIQVINPDWRTRFLSVITNPTVAYLLLLLGIY
GIFFELVNPGYVLPGVVGAVSMLFALYALQLLPINYAGLGLIILGILFVIAEAFTPSFGALGVGGTVSFILGSIMLMNTE
HLAFQIAWSAIWAMAVLNILIFVLVLGMLIKSRNQKIRHGLETLVGAKGRALGDINLEGQAVIKGEIWNVHSSSPIAANK
SVKVTRASGLLLEVEEDQSVY

Specific function: Unknown

COG id: COG1030

COG function: function code O; Membrane-bound serine protease (ClpP class)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002810
- InterPro:   IPR002825 [H]

Pfam domain/function: PF01972 DUF114; PF01957 NfeD [H]

EC number: NA

Molecular weight: Translated: 54122; Mature: 54122

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRDCVRQEGLYKLNNLFCKWAAVIRGLQGIIFRSRLSVSVLEDSDSVATKQSQLSVTCE
CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHEEEEHH
MKLSKFMQTSCIFIFLTLFLLVGLQTSFAAKIVELNIKGPIGPATADYLERGIKSAQDAD
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEEEEEECCCCCCCHHHHHHHHHCCCCCCC
LIVILIDTPGGLYDSTRNIIQLFLLSDVPIVTYVSPTGARAASAGTYLMYASTLAAMAPG
EEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCC
TQMGAASPVSLGTGFSEGEKDEKKKSTMENKVTHDAVATIRSLAQLRGRDPDFAEKAVTE
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHC
GKSITANEALSKGVVNYIAKNRDDLLSQIHGIKVSQNNKTITINTESPDIQVINPDWRTR
CCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCEEEECCCCEEEEECCCCCEEEECCHHHHH
FLSVITNPTVAYLLLLLGIYGIFFELVNPGYVLPGVVGAVSMLFALYALQLLPINYAGLG
HHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LIILGILFVIAEAFTPSFGALGVGGTVSFILGSIMLMNTEHLAFQIAWSAIWAMAVLNIL
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
IFVLVLGMLIKSRNQKIRHGLETLVGAKGRALGDINLEGQAVIKGEIWNVHSSSPIAANK
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEEEEEECCCCCCCCCC
SVKVTRASGLLLEVEEDQSVY
CEEEEECCCEEEEECCCCCCC
>Mature Secondary Structure
MHRDCVRQEGLYKLNNLFCKWAAVIRGLQGIIFRSRLSVSVLEDSDSVATKQSQLSVTCE
CCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHEEEEHH
MKLSKFMQTSCIFIFLTLFLLVGLQTSFAAKIVELNIKGPIGPATADYLERGIKSAQDAD
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEEEEEECCCCCCCHHHHHHHHHCCCCCCC
LIVILIDTPGGLYDSTRNIIQLFLLSDVPIVTYVSPTGARAASAGTYLMYASTLAAMAPG
EEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCC
TQMGAASPVSLGTGFSEGEKDEKKKSTMENKVTHDAVATIRSLAQLRGRDPDFAEKAVTE
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHC
GKSITANEALSKGVVNYIAKNRDDLLSQIHGIKVSQNNKTITINTESPDIQVINPDWRTR
CCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCEEEECCCCEEEEECCCCCEEEECCHHHHH
FLSVITNPTVAYLLLLLGIYGIFFELVNPGYVLPGVVGAVSMLFALYALQLLPINYAGLG
HHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LIILGILFVIAEAFTPSFGALGVGGTVSFILGSIMLMNTEHLAFQIAWSAIWAMAVLNIL
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
IFVLVLGMLIKSRNQKIRHGLETLVGAKGRALGDINLEGQAVIKGEIWNVHSSSPIAANK
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEEEEEECCCCCCCCCC
SVKVTRASGLLLEVEEDQSVY
CEEEEECCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]