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The map label for this gene is dcd

Identifier: 148361297

GI number: 148361297

Start: 3521420

End: 3521953

Strand: Reverse

Name: dcd

Synonym: LPC_3271

Alternate gene names: 148361297

Gene position: 3521953-3521420 (Counterclockwise)

Preceding gene: 148361298

Following gene: 148361293

Centisome position: 98.48

GC content: 42.7

Gene sequence:

>534_bases
ATGGCCCTTGAGCATGGGATGATTTCTCCATTTCAGGCCGGTCAAGTGCGAGAAAACCAAAATGGTAGGATTATTTCTTA
TGGCGTCTCCAGTTATGGGTATGATGTTCGTTGTTCGAATGAATTCAAGATTTTTACGAATATTAATTCAGCGATTGTTG
ATCCCAAGGCGTTTGATGAAAATAGCTTTGTAGATGTTCAGTCTGATGTCTGCATTATTCCCCCAAACTCGTTTGCCTTG
GCAAGAACGGTCGAATATTTTCGTATACCCCGTAATATATTAACGATATGCTTAGGTAAATCCACTTACGCTCGTTGCGG
GATTATAGTGAATGTTACTCCTCTGGAACCGGAATGGGAGGGGCATGTTACTCTCGAGTTTTCCAATACGACCACTTTGC
CAGCCAAGATTTATGCGTATGAGGGAGTTGCTCAAATGTTGTTTTTAGAGGCTAATGAGGTTTGTGCTGTTTCTTATCGT
GATCGAAACGGAAAGTACCAGGGACAAACCGGGGTTACACTACCACGCACTTAG

Upstream 100 bases:

>100_bases
CAAAACAAACTTTCGTTTCATTGACTTTTGTGATAGAAATCTATCTTTTTAAGAAAAGAGGAATATCGTGTCAATCAAAT
CAGACAGATGGATAGAGAAA

Downstream 100 bases:

>100_bases
GATGAACAATAAAGCTTAATCTTTATCCAAAAGTGGGAACTTGGCTCGCGACGAATTGACCCGCTCTCGTAATTCCTTTC
CAGGTTTAAAGTGAGGACTG

Product: deoxycytidine triphosphate deaminase

Products: NA

Alternate protein names: dCTP deaminase

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MALEHGMISPFQAGQVRENQNGRIISYGVSSYGYDVRCSNEFKIFTNINSAIVDPKAFDENSFVDVQSDVCIIPPNSFAL
ARTVEYFRIPRNILTICLGKSTYARCGIIVNVTPLEPEWEGHVTLEFSNTTTLPAKIYAYEGVAQMLFLEANEVCAVSYR
DRNGKYQGQTGVTLPRT

Sequences:

>Translated_177_residues
MALEHGMISPFQAGQVRENQNGRIISYGVSSYGYDVRCSNEFKIFTNINSAIVDPKAFDENSFVDVQSDVCIIPPNSFAL
ARTVEYFRIPRNILTICLGKSTYARCGIIVNVTPLEPEWEGHVTLEFSNTTTLPAKIYAYEGVAQMLFLEANEVCAVSYR
DRNGKYQGQTGVTLPRT
>Mature_176_residues
ALEHGMISPFQAGQVRENQNGRIISYGVSSYGYDVRCSNEFKIFTNINSAIVDPKAFDENSFVDVQSDVCIIPPNSFALA
RTVEYFRIPRNILTICLGKSTYARCGIIVNVTPLEPEWEGHVTLEFSNTTTLPAKIYAYEGVAQMLFLEANEVCAVSYRD
RNGKYQGQTGVTLPRT

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DCD_LEGPA (Q5X0R9)

Other databases:

- EMBL:   CR628336
- RefSeq:   YP_125329.1
- ProteinModelPortal:   Q5X0R9
- SMR:   Q5X0R9
- STRING:   Q5X0R9
- GeneID:   3119409
- GenomeReviews:   CR628336_GR
- KEGG:   lpp:lpp3027
- LegioList:   lpp3027
- eggNOG:   COG0717
- HOGENOM:   HBG553199
- OMA:   MEYFRIP
- ProtClustDB:   PRK00416
- BioCyc:   LPNE297246:LPP3027-MONOMER
- HAMAP:   MF_00146
- InterPro:   IPR011962
- InterPro:   IPR008180
- TIGRFAMs:   TIGR02274

Pfam domain/function: PF00692 dUTPase

EC number: =3.5.4.13

Molecular weight: Translated: 19763; Mature: 19631

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALEHGMISPFQAGQVRENQNGRIISYGVSSYGYDVRCSNEFKIFTNINSAIVDPKAFDE
CCCCCCCCCCCCCCCEEECCCCCEEEEECCCCCEEEEECCCEEEEEECCCEEECCCCCCC
NSFVDVQSDVCIIPPNSFALARTVEYFRIPRNILTICLGKSTYARCGIIVNVTPLEPEWE
CCEEEECCCEEEECCCCCCHHHHHHHHHCCCHHEEEEECCCCHHEEEEEEEEECCCCCCC
GHVTLEFSNTTTLPAKIYAYEGVAQMLFLEANEVCAVSYRDRNGKYQGQTGVTLPRT
CEEEEEECCCCCCCEEEEEECCCEEEEEEECCCEEEEEEECCCCEECCCCCEECCCC
>Mature Secondary Structure 
ALEHGMISPFQAGQVRENQNGRIISYGVSSYGYDVRCSNEFKIFTNINSAIVDPKAFDE
CCCCCCCCCCCCCCEEECCCCCEEEEECCCCCEEEEECCCEEEEEECCCEEECCCCCCC
NSFVDVQSDVCIIPPNSFALARTVEYFRIPRNILTICLGKSTYARCGIIVNVTPLEPEWE
CCEEEECCCEEEECCCCCCHHHHHHHHHCCCHHEEEEECCCCHHEEEEEEEEECCCCCCC
GHVTLEFSNTTTLPAKIYAYEGVAQMLFLEANEVCAVSYRDRNGKYQGQTGVTLPRT
CEEEEEECCCCCCCEEEEEECCCEEEEEEECCCEEEEEEECCCCEECCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA