Click here to switch to the map view.

The map label for this gene is 148361256

Identifier: 148361256

GI number: 148361256

Start: 3483562

End: 3485190

Strand: Reverse

Name: 148361256

Synonym: LPC_3230

Alternate gene names: NA

Gene position: 3485190-3483562 (Counterclockwise)

Preceding gene: 148361257

Following gene: 148361255

Centisome position: 97.45

GC content: 41.74

Gene sequence:

>1629_bases
GTGAAATTTTTAAATAAAAGCACAGCATTGTTACCGGTAATTATTTTATCGGGCCTGATTAGTTTTCATGCCGCAAGCGC
CAAGACTTCTTCAAATGCTGATAATTCACTTTATTCCTGGACAGAAAATCCTTCAGCTGAAGCACAGAGAGTGGAGCAAG
CGGAGGAAAGACTAAAGGCAGCTATTGCCAACCCGGAATACATGCTGAAAAATTGGATAGAGCTGCCTACCTCGCCTGAA
TCAAAAAAGAAAACAAGGCACCAGTTGACGATAAGAGAAGCCATACTGTTGGCCTTGCGTTATAATCCTAATATCCAGAA
TGCGGAATTAGATCGTATTATTCAGCGCTATCAATTGCGTTTGGCTAATAATGAGTTTGAATTGCAATATGCTCTTGGTG
CTTCAGGCGTTGTGCAAAAAAGTACTTTTGAGGGGATAGGCAGTTCTACGAATCATTCTTTTCTGGCCAGTCCTGAATTG
GATTTGAAAACCAAAATAGGCACCAAGGCGTCTGTATCCATCGATAACAATGTTTCCACCAACAACAGCTATAATCCGGT
ATTGAATTTATCCATTACTCAGCCTTTGCTCCGTGGATTTGGCAAGTCAGCGAATGAAGCAAAACTGTTGGATGCGATTG
ATAAGGAATGGCTAAATAAATTAAGTTTACAGCAATCGGTTATGGATCAGATTACGCAGGTGATTACGGCGTACAGGGCT
TTGATTTTAAGTGGGAACAATTTAGAGAATCAGCGCTTGCAATTGGAAGAAGCCAGAAAATCCTATCGTATTAATGAAAA
AAAGATTGCAGCGGGACAATTAGAACCTACCGGAAATATTCAGCAATCCTACCAGATAGAATCTTTGAGTTTGATGGTAG
AACAAGGTGAAAATGATTTTAAATTAGCCTCTCAGGAATTATTGCAAATGATTGGGCTTGATCCGGATTTGCATATTTCA
GTTCCCAGTGATGTGACGATAAAGGAAATTATAGTGCCTGACTTGCAAGAGTCCATTGCCATCGCATTAAGTCACAATAC
TCAGTATCTGGCCCAGAAAATGGCCTTGCGTGCGGATGAGAGGGCTTATACTGTTGCAAAAAATCAGCAACTTTGGCAGC
TTGATTTGGCGGGTACTGTGCAAGGCGGCGCAGTCAATGATGTCACCGGGACCAGCAGTGGTCTAAGCAGCATTTACAAT
GGGAATAATATCACGGAATCAGCCCGGGTCACCCTGACCATTCCATTAAATGACATTGGCCGGCGTAGTCAATTAATTAA
TGCTAAAGTCCAGTTGGAAAAAGACAAAATCAATCTTATCGCAGCCAAAAGAGCTTTAATTACCAGTGTAACCAATACCA
TCAATAATATTCAAAGCTTGGCCAAGCGCTATGAGCTGGCACAAAAACAAGTCAAATTGGCAGAGCAGTCTTACGCTTTG
GAAAAGAAAAAACAGCAGGCAGGAATATCGAGCGCCCTGGATGTGAACAATACTCAGAATCAATTGATTCAGGCACAGTC
AGGATTGATAGGGGCAAAAATTGCGTATCTCAATCAGTTATCCGCGTTGCAAAGGATTTTAGGGACCACGCTGGATTACT
GGCAGATTAAACTAAGGTATGGCGGATGA

Upstream 100 bases:

>100_bases
CTGCAGGACAGGCAACGCTTTTCGGTACCCGGGTATGGGGTTAGTCGTTTCGAATAACCTTGAGGGATAGGCATTTTTAT
AAACACAGGCGATAACAACG

Downstream 100 bases:

>100_bases
ACAATTATCTGAAAATATTCTCTATGGTGTCATTGATTTTAATGCTGGTGTCTTGTGGCAGTTCTGATAAGCCGCAAACC
TCTTCATTAAAAACGTATGA

Product: outer membrane efflux protein

Products: NA

Alternate protein names: Outer Membrane Protein; Outer Membrane Efflux Family Protein; Outer Membrane Lipoprotein; Type I Secretion Outer Membrane Protein; Outer Efflux Pump Domain-Containing Protein

Number of amino acids: Translated: 542; Mature: 542

Protein sequence:

>542_residues
MKFLNKSTALLPVIILSGLISFHAASAKTSSNADNSLYSWTENPSAEAQRVEQAEERLKAAIANPEYMLKNWIELPTSPE
SKKKTRHQLTIREAILLALRYNPNIQNAELDRIIQRYQLRLANNEFELQYALGASGVVQKSTFEGIGSSTNHSFLASPEL
DLKTKIGTKASVSIDNNVSTNNSYNPVLNLSITQPLLRGFGKSANEAKLLDAIDKEWLNKLSLQQSVMDQITQVITAYRA
LILSGNNLENQRLQLEEARKSYRINEKKIAAGQLEPTGNIQQSYQIESLSLMVEQGENDFKLASQELLQMIGLDPDLHIS
VPSDVTIKEIIVPDLQESIAIALSHNTQYLAQKMALRADERAYTVAKNQQLWQLDLAGTVQGGAVNDVTGTSSGLSSIYN
GNNITESARVTLTIPLNDIGRRSQLINAKVQLEKDKINLIAAKRALITSVTNTINNIQSLAKRYELAQKQVKLAEQSYAL
EKKKQQAGISSALDVNNTQNQLIQAQSGLIGAKIAYLNQLSALQRILGTTLDYWQIKLRYGG

Sequences:

>Translated_542_residues
MKFLNKSTALLPVIILSGLISFHAASAKTSSNADNSLYSWTENPSAEAQRVEQAEERLKAAIANPEYMLKNWIELPTSPE
SKKKTRHQLTIREAILLALRYNPNIQNAELDRIIQRYQLRLANNEFELQYALGASGVVQKSTFEGIGSSTNHSFLASPEL
DLKTKIGTKASVSIDNNVSTNNSYNPVLNLSITQPLLRGFGKSANEAKLLDAIDKEWLNKLSLQQSVMDQITQVITAYRA
LILSGNNLENQRLQLEEARKSYRINEKKIAAGQLEPTGNIQQSYQIESLSLMVEQGENDFKLASQELLQMIGLDPDLHIS
VPSDVTIKEIIVPDLQESIAIALSHNTQYLAQKMALRADERAYTVAKNQQLWQLDLAGTVQGGAVNDVTGTSSGLSSIYN
GNNITESARVTLTIPLNDIGRRSQLINAKVQLEKDKINLIAAKRALITSVTNTINNIQSLAKRYELAQKQVKLAEQSYAL
EKKKQQAGISSALDVNNTQNQLIQAQSGLIGAKIAYLNQLSALQRILGTTLDYWQIKLRYGG
>Mature_542_residues
MKFLNKSTALLPVIILSGLISFHAASAKTSSNADNSLYSWTENPSAEAQRVEQAEERLKAAIANPEYMLKNWIELPTSPE
SKKKTRHQLTIREAILLALRYNPNIQNAELDRIIQRYQLRLANNEFELQYALGASGVVQKSTFEGIGSSTNHSFLASPEL
DLKTKIGTKASVSIDNNVSTNNSYNPVLNLSITQPLLRGFGKSANEAKLLDAIDKEWLNKLSLQQSVMDQITQVITAYRA
LILSGNNLENQRLQLEEARKSYRINEKKIAAGQLEPTGNIQQSYQIESLSLMVEQGENDFKLASQELLQMIGLDPDLHIS
VPSDVTIKEIIVPDLQESIAIALSHNTQYLAQKMALRADERAYTVAKNQQLWQLDLAGTVQGGAVNDVTGTSSGLSSIYN
GNNITESARVTLTIPLNDIGRRSQLINAKVQLEKDKINLIAAKRALITSVTNTINNIQSLAKRYELAQKQVKLAEQSYAL
EKKKQQAGISSALDVNNTQNQLIQAQSGLIGAKIAYLNQLSALQRILGTTLDYWQIKLRYGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59973; Mature: 59973

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFLNKSTALLPVIILSGLISFHAASAKTSSNADNSLYSWTENPSAEAQRVEQAEERLKA
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHH
AIANPEYMLKNWIELPTSPESKKKTRHQLTIREAILLALRYNPNIQNAELDRIIQRYQLR
HHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHH
LANNEFELQYALGASGVVQKSTFEGIGSSTNHSFLASPELDLKTKIGTKASVSIDNNVST
HCCCCEEEEEEECCCCCEEHHHHHCCCCCCCCCEEECCCCCCEECCCCEEEEEECCCCCC
NNSYNPVLNLSITQPLLRGFGKSANEAKLLDAIDKEWLNKLSLQQSVMDQITQVITAYRA
CCCCCCEEEEEEHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LILSGNNLENQRLQLEEARKSYRINEKKIAAGQLEPTGNIQQSYQIESLSLMVEQGENDF
HHCCCCCCCHHHHHHHHHHHHHCCCHHHEECCCCCCCCCCCHHEEHHHHHHHHHCCCCHH
KLASQELLQMIGLDPDLHISVPSDVTIKEIIVPDLQESIAIALSHNTQYLAQKMALRADE
HHHHHHHHHHHCCCCCEEEECCCCCCHHHHHCCCCHHHEEEEEECCHHHHHHHHHHHCCC
RAYTVAKNQQLWQLDLAGTVQGGAVNDVTGTSSGLSSIYNGNNITESARVTLTIPLNDIG
CCEEEECCCCEEEEEECCEECCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEEECHHCC
RRSQLINAKVQLEKDKINLIAAKRALITSVTNTINNIQSLAKRYELAQKQVKLAEQSYAL
CHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKKKQQAGISSALDVNNTQNQLIQAQSGLIGAKIAYLNQLSALQRILGTTLDYWQIKLRY
HHHHHHCCCCHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEE
GG
CC
>Mature Secondary Structure
MKFLNKSTALLPVIILSGLISFHAASAKTSSNADNSLYSWTENPSAEAQRVEQAEERLKA
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHH
AIANPEYMLKNWIELPTSPESKKKTRHQLTIREAILLALRYNPNIQNAELDRIIQRYQLR
HHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHH
LANNEFELQYALGASGVVQKSTFEGIGSSTNHSFLASPELDLKTKIGTKASVSIDNNVST
HCCCCEEEEEEECCCCCEEHHHHHCCCCCCCCCEEECCCCCCEECCCCEEEEEECCCCCC
NNSYNPVLNLSITQPLLRGFGKSANEAKLLDAIDKEWLNKLSLQQSVMDQITQVITAYRA
CCCCCCEEEEEEHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LILSGNNLENQRLQLEEARKSYRINEKKIAAGQLEPTGNIQQSYQIESLSLMVEQGENDF
HHCCCCCCCHHHHHHHHHHHHHCCCHHHEECCCCCCCCCCCHHEEHHHHHHHHHCCCCHH
KLASQELLQMIGLDPDLHISVPSDVTIKEIIVPDLQESIAIALSHNTQYLAQKMALRADE
HHHHHHHHHHHCCCCCEEEECCCCCCHHHHHCCCCHHHEEEEEECCHHHHHHHHHHHCCC
RAYTVAKNQQLWQLDLAGTVQGGAVNDVTGTSSGLSSIYNGNNITESARVTLTIPLNDIG
CCEEEECCCCEEEEEECCEECCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEEECHHCC
RRSQLINAKVQLEKDKINLIAAKRALITSVTNTINNIQSLAKRYELAQKQVKLAEQSYAL
CHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKKKQQAGISSALDVNNTQNQLIQAQSGLIGAKIAYLNQLSALQRILGTTLDYWQIKLRY
HHHHHHCCCCHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEE
GG
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA