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The map label for this gene is yrfI [H]

Identifier: 148361130

GI number: 148361130

Start: 3357840

End: 3358685

Strand: Direct

Name: yrfI [H]

Synonym: LPC_3104

Alternate gene names: 148361130

Gene position: 3357840-3358685 (Clockwise)

Preceding gene: 148361127

Following gene: 148361133

Centisome position: 93.89

GC content: 37.59

Gene sequence:

>846_bases
ATGAAAGAAGCAGATACCTTACAGCGTTTTATTTTTGAGCATGCGAATATCCGTGGCGAAATCGTTCATATTGAAAAAAC
ATTTCAAAACATCATGAACCAACGTGATTACCCACCCATGGTAAAAAATCTTTTAGGTGAAGCGTTAGTTTCATGTTTAC
TCCTGGCAAGCAGCATTAAATTTGAAGGAAATTTAAGTCTGCAATTTCAAGGTGACGAAAGATTATCCCTGTTACTCGTT
CAATGCGACCATAATTTAAATATAAGGGGCTTTGCAAAATGTGCAGAGGGTCTTGAAATTGCTGATTACGCGACTGCTTT
TCTTCAAGGCCGAATGGTCATTACGATCAGTCAAGACAACCAAACTCAAGCCTATCAAAGCCTGATACCTATTCAATCTA
CGTCCATGAGCGAAAATCTGATGACTTATTTTGCCCAATCAGAACAAATTGCTACTCGTGTGTGGTTAGCTGTCAATGAA
GATATGGCTGCAGGTATGCTATTACAACTTATGCCAGGTCAAGATACAATTCAAAGAGAACAATTTTGGGAGTATGCCGT
TCAGCTGGGACAAACAGTAACTGAAAATGAATTGCTGACCATAGACAATCAAACACTACTCTATCGTCTTTATCATGAAA
CGGAATTAAGAATATTCGAAAGCCGATCTACCCGTTTCCAATGCCGTTGTAATCAGGAAAAAATGAAACAGGTCATTACT
GTACTGGGAGAAGAAGAAGCAACAGATTTAATCAAAGAAAAAGGAAAAATAGAAATCACTTGCGATTTTTGCAATCAAAA
ATACACTTTTGATTCAATCGACGTGACTCTGCTATTTCGCAAATAA

Upstream 100 bases:

>100_bases
TATTCCTCTTGCAAGATTTTGTTCAAAATAACTGAACTCAGAAAACGCCTGAGATAAACATTTTATGTTAGAATAGACCT
ATTTGTGTTATGAGTTTGAA

Downstream 100 bases:

>100_bases
AATGAGCCTCTGCCTACTGCATAGTCAAATCAGGATCCGCCAGAACGCCACAACTTGACTGACTAAACTGGATATACTCT
CCTCGCATGGCTTGCAGTAC

Product: heat shock protein 33

Products: NA

Alternate protein names: Heat shock protein 33 homolog; HSP33 [H]

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MKEADTLQRFIFEHANIRGEIVHIEKTFQNIMNQRDYPPMVKNLLGEALVSCLLLASSIKFEGNLSLQFQGDERLSLLLV
QCDHNLNIRGFAKCAEGLEIADYATAFLQGRMVITISQDNQTQAYQSLIPIQSTSMSENLMTYFAQSEQIATRVWLAVNE
DMAAGMLLQLMPGQDTIQREQFWEYAVQLGQTVTENELLTIDNQTLLYRLYHETELRIFESRSTRFQCRCNQEKMKQVIT
VLGEEEATDLIKEKGKIEITCDFCNQKYTFDSIDVTLLFRK

Sequences:

>Translated_281_residues
MKEADTLQRFIFEHANIRGEIVHIEKTFQNIMNQRDYPPMVKNLLGEALVSCLLLASSIKFEGNLSLQFQGDERLSLLLV
QCDHNLNIRGFAKCAEGLEIADYATAFLQGRMVITISQDNQTQAYQSLIPIQSTSMSENLMTYFAQSEQIATRVWLAVNE
DMAAGMLLQLMPGQDTIQREQFWEYAVQLGQTVTENELLTIDNQTLLYRLYHETELRIFESRSTRFQCRCNQEKMKQVIT
VLGEEEATDLIKEKGKIEITCDFCNQKYTFDSIDVTLLFRK
>Mature_281_residues
MKEADTLQRFIFEHANIRGEIVHIEKTFQNIMNQRDYPPMVKNLLGEALVSCLLLASSIKFEGNLSLQFQGDERLSLLLV
QCDHNLNIRGFAKCAEGLEIADYATAFLQGRMVITISQDNQTQAYQSLIPIQSTSMSENLMTYFAQSEQIATRVWLAVNE
DMAAGMLLQLMPGQDTIQREQFWEYAVQLGQTVTENELLTIDNQTLLYRLYHETELRIFESRSTRFQCRCNQEKMKQVIT
VLGEEEATDLIKEKGKIEITCDFCNQKYTFDSIDVTLLFRK

Specific function: Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress [H]

COG id: COG1281

COG function: function code O; Disulfide bond chaperones of the HSP33 family

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HSP33 family [H]

Homologues:

Organism=Escherichia coli, GI87082260, Length=280, Percent_Identity=34.2857142857143, Blast_Score=196, Evalue=1e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000397
- InterPro:   IPR016154
- InterPro:   IPR016153
- InterPro:   IPR023212 [H]

Pfam domain/function: PF01430 HSP33 [H]

EC number: NA

Molecular weight: Translated: 32412; Mature: 32412

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEADTLQRFIFEHANIRGEIVHIEKTFQNIMNQRDYPPMVKNLLGEALVSCLLLASSIK
CCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCE
FEGNLSLQFQGDERLSLLLVQCDHNLNIRGFAKCAEGLEIADYATAFLQGRMVITISQDN
ECCCEEEEECCCCCEEEEEEEECCCCCCHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCC
QTQAYQSLIPIQSTSMSENLMTYFAQSEQIATRVWLAVNEDMAAGMLLQLMPGQDTIQRE
HHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHEEEEEEECCCHHHCCCEEECCCCHHHHHH
QFWEYAVQLGQTVTENELLTIDNQTLLYRLYHETELRIFESRSTRFQCRCNQEKMKQVIT
HHHHHHHHHCCCCCCCCEEEECCCEEEEEEEHHCEEEEEECCCCEEEEECCHHHHHHHHH
VLGEEEATDLIKEKGKIEITCDFCNQKYTFDSIDVTLLFRK
HHCCHHHHHHHHCCCCEEEEEEECCCCEEECCEEEEEEEEC
>Mature Secondary Structure
MKEADTLQRFIFEHANIRGEIVHIEKTFQNIMNQRDYPPMVKNLLGEALVSCLLLASSIK
CCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCE
FEGNLSLQFQGDERLSLLLVQCDHNLNIRGFAKCAEGLEIADYATAFLQGRMVITISQDN
ECCCEEEEECCCCCEEEEEEEECCCCCCHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCC
QTQAYQSLIPIQSTSMSENLMTYFAQSEQIATRVWLAVNEDMAAGMLLQLMPGQDTIQRE
HHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHEEEEEEECCCHHHCCCEEECCCCHHHHHH
QFWEYAVQLGQTVTENELLTIDNQTLLYRLYHETELRIFESRSTRFQCRCNQEKMKQVIT
HHHHHHHHHCCCCCCCCEEEECCCEEEEEEEHHCEEEEEECCCCEEEEECCHHHHHHHHH
VLGEEEATDLIKEKGKIEITCDFCNQKYTFDSIDVTLLFRK
HHCCHHHHHHHHCCCCEEEEEEECCCCEEECCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA