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The map label for this gene is 148360768

Identifier: 148360768

GI number: 148360768

Start: 712578

End: 713342

Strand: Direct

Name: 148360768

Synonym: LPC_2718

Alternate gene names: NA

Gene position: 712578-713342 (Clockwise)

Preceding gene: 148360771

Following gene: 148360767

Centisome position: 19.92

GC content: 39.22

Gene sequence:

>765_bases
ATGATTAAGCGATGGCTATTAGTGATATTATTGATTTCTGGCAACGCTTTTTCCCAGCAGATGATAACCAAGGTTATCGA
ATTGAATTATTTGCAAGCAGATAAGGTTATTCAGTTAATCCAACCATTATTGCAGACTGATGAGAAAGTAAGTGGTTCAG
GGCAAACACTAATTGTTAATGTGAGTCCCCAAACTTTAACGCAAATCAGAAACGTATTACATAAAATAGATGTTCCTCCT
GTTGTTTTTAATATTACTGTTTATCAAGGGGATCCTGAATGGTTAAGCTCACAGGATGGGAATGATGTCGTTTACAGCAC
ACAACCACAATACGAAGTGCAGCGCAGTCAATCCGTTAAAGTCATGAGTGGGGAATCCGCTTTTGTTGCGACCGGTGAAC
AAGTACCAGTAGTTACTTCAGTTGGTGTTGGTCTTTTAGCCACAGGAGTATCTTATGAGCAGCATAATATCCAAAACGGT
TTGCTAGTACATCCTGTTTTGCAAGGATCACAGGTCAAATTGACGGTGAGAAGAGTGCGAGAGCAGGAAAATGTAGAGAG
TGATCAACAATTTGATAATCAACAAATAGATACTACGATCATGGCGCCATTGAATAAATGGGTTCCATTAGGTACAGCAG
AGGGGGTTCAAAATACCGATTCTTCTTCAACTTCTTATACAGCTGGAAGGCCTTTTTCTCAAAATTCAACTTTATACATT
AAGGTATCAGTTGTAAAATCCACCCCTTCTGGGACCACCAAATAA

Upstream 100 bases:

>100_bases
GGGATTAAAGGGGGCTATTTGTAACCTTGTGAGTCCATCTATTAATGCTACAATTCAATAAAGGATTTTATAATTAAATT
GAAACAACAGGAGTGTTTCT

Downstream 100 bases:

>100_bases
AATGATGGAAATGCGTTTCATAATCATTTTACCTTAATGAGCTTTTCTTCCCTCAACTGGAGAATAAGCCAGGATTTACT
GATTAACTAGCTCCTAATCC

Product: type II/III secretion system protein

Products: NA

Alternate protein names: Type II And III Secretion System Protein; NolW Domain Protein

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MIKRWLLVILLISGNAFSQQMITKVIELNYLQADKVIQLIQPLLQTDEKVSGSGQTLIVNVSPQTLTQIRNVLHKIDVPP
VVFNITVYQGDPEWLSSQDGNDVVYSTQPQYEVQRSQSVKVMSGESAFVATGEQVPVVTSVGVGLLATGVSYEQHNIQNG
LLVHPVLQGSQVKLTVRRVREQENVESDQQFDNQQIDTTIMAPLNKWVPLGTAEGVQNTDSSSTSYTAGRPFSQNSTLYI
KVSVVKSTPSGTTK

Sequences:

>Translated_254_residues
MIKRWLLVILLISGNAFSQQMITKVIELNYLQADKVIQLIQPLLQTDEKVSGSGQTLIVNVSPQTLTQIRNVLHKIDVPP
VVFNITVYQGDPEWLSSQDGNDVVYSTQPQYEVQRSQSVKVMSGESAFVATGEQVPVVTSVGVGLLATGVSYEQHNIQNG
LLVHPVLQGSQVKLTVRRVREQENVESDQQFDNQQIDTTIMAPLNKWVPLGTAEGVQNTDSSSTSYTAGRPFSQNSTLYI
KVSVVKSTPSGTTK
>Mature_254_residues
MIKRWLLVILLISGNAFSQQMITKVIELNYLQADKVIQLIQPLLQTDEKVSGSGQTLIVNVSPQTLTQIRNVLHKIDVPP
VVFNITVYQGDPEWLSSQDGNDVVYSTQPQYEVQRSQSVKVMSGESAFVATGEQVPVVTSVGVGLLATGVSYEQHNIQNG
LLVHPVLQGSQVKLTVRRVREQENVESDQQFDNQQIDTTIMAPLNKWVPLGTAEGVQNTDSSSTSYTAGRPFSQNSTLYI
KVSVVKSTPSGTTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27913; Mature: 27913

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKRWLLVILLISGNAFSQQMITKVIELNYLQADKVIQLIQPLLQTDEKVSGSGQTLIVN
CHHHHEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEE
VSPQTLTQIRNVLHKIDVPPVVFNITVYQGDPEWLSSQDGNDVVYSTQPQYEVQRSQSVK
ECHHHHHHHHHHHHHCCCCCEEEEEEEEECCHHHHCCCCCCEEEEECCCCHHHHCCCCEE
VMSGESAFVATGEQVPVVTSVGVGLLATGVSYEQHNIQNGLLVHPVLQGSQVKLTVRRVR
EEECCCEEEECCCCCCCHHHCCHHHHHCCCCCHHHCCCCCEEEEEECCCCEEEEHHHHHH
EQENVESDQQFDNQQIDTTIMAPLNKWVPLGTAEGVQNTDSSSTSYTAGRPFSQNSTLYI
HHHCCCHHHHCCCCCCCCEEECCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
KVSVVKSTPSGTTK
EEEEEECCCCCCCC
>Mature Secondary Structure
MIKRWLLVILLISGNAFSQQMITKVIELNYLQADKVIQLIQPLLQTDEKVSGSGQTLIVN
CHHHHEEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEE
VSPQTLTQIRNVLHKIDVPPVVFNITVYQGDPEWLSSQDGNDVVYSTQPQYEVQRSQSVK
ECHHHHHHHHHHHHHCCCCCEEEEEEEEECCHHHHCCCCCCEEEEECCCCHHHHCCCCEE
VMSGESAFVATGEQVPVVTSVGVGLLATGVSYEQHNIQNGLLVHPVLQGSQVKLTVRRVR
EEECCCEEEECCCCCCCHHHCCHHHHHCCCCCHHHCCCCCEEEEEECCCCEEEEHHHHHH
EQENVESDQQFDNQQIDTTIMAPLNKWVPLGTAEGVQNTDSSSTSYTAGRPFSQNSTLYI
HHHCCCHHHHCCCCCCCCEEECCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
KVSVVKSTPSGTTK
EEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA