Click here to switch to the map view.

The map label for this gene is yqgE [C]

Identifier: 148360767

GI number: 148360767

Start: 713635

End: 714198

Strand: Direct

Name: yqgE [C]

Synonym: LPC_2717

Alternate gene names: 148360767

Gene position: 713635-714198 (Clockwise)

Preceding gene: 148360768

Following gene: 148360766

Centisome position: 19.95

GC content: 40.25

Gene sequence:

>564_bases
ATGGCAATTATCAGTTCACTGGCCAATCACCTATTGATTGCCATGCCTTCCTTAAAAGATCCAAACTTTGAAAGGTCAGT
GGTCTATTTGTGCGAGCATAATGAGCAGGGGTCAGTTGGTTTAATTATTAACAGACCTTTACAGTTTCCACTATCCATTG
TTTTTGAGCAATTGCAAATTGAACCTATTCGAGTAGAAAAAAATGGGTTGCCTTTATTGTTTGGCGGACCAGTACAACCA
GAAAGAGGATTTGTTATTCATAAACAAATGGGCGGGTGGCGTTCGAGTTTGTTTTTGCAAGATGAAGTGACGGTTACTAC
CTCAAATGATATCATTCGTGCCATAGCTTATGACGAAGGGCCTAAAGATGTATTAATCACTTTAGGTTATGCTGCTTGGA
CAGAGCAGCAATTGGAAAGAGAAATTATGAGTAACACGTGGTTAGTTTGTCCCTATAAATCTGAAATTCTTTATGAAGTG
CCCTTTGAAGAGCGTTGGGAATACGCGGGATTAACGCTGGGCATCAAAATGAATCAACTATCTTCTGATGCTGGCCATGC
CTAG

Upstream 100 bases:

>100_bases
GCCAACACGCATAGATTAAATTAAAAACAAAATGATAAAATTAAAATCATTAATGGTGTATAATTAAAGTGAGCGGAGAG
AATTTTGGGGGGGACTTCTT

Downstream 100 bases:

>100_bases
AGGTGTTTATTTAGGTTTTGATTTCGGGTATAAACGCATAGGAGTCGCTGTAGGACAGCGCCTAACTTGTAGTGCCTCTC
CCTTATCTACTATAGAAGCC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MAIISSLANHLLIAMPSLKDPNFERSVVYLCEHNEQGSVGLIINRPLQFPLSIVFEQLQIEPIRVEKNGLPLLFGGPVQP
ERGFVIHKQMGGWRSSLFLQDEVTVTTSNDIIRAIAYDEGPKDVLITLGYAAWTEQQLEREIMSNTWLVCPYKSEILYEV
PFEERWEYAGLTLGIKMNQLSSDAGHA

Sequences:

>Translated_187_residues
MAIISSLANHLLIAMPSLKDPNFERSVVYLCEHNEQGSVGLIINRPLQFPLSIVFEQLQIEPIRVEKNGLPLLFGGPVQP
ERGFVIHKQMGGWRSSLFLQDEVTVTTSNDIIRAIAYDEGPKDVLITLGYAAWTEQQLEREIMSNTWLVCPYKSEILYEV
PFEERWEYAGLTLGIKMNQLSSDAGHA
>Mature_186_residues
AIISSLANHLLIAMPSLKDPNFERSVVYLCEHNEQGSVGLIINRPLQFPLSIVFEQLQIEPIRVEKNGLPLLFGGPVQPE
RGFVIHKQMGGWRSSLFLQDEVTVTTSNDIIRAIAYDEGPKDVLITLGYAAWTEQQLEREIMSNTWLVCPYKSEILYEVP
FEERWEYAGLTLGIKMNQLSSDAGHA

Specific function: Unknown

COG id: COG1678

COG function: function code K; Putative transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0301 (AlgH) family

Homologues:

Organism=Escherichia coli, GI87082187, Length=189, Percent_Identity=41.2698412698413, Blast_Score=169, Evalue=1e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2717_LEGPC (A5IGX8)

Other databases:

- EMBL:   CP000675
- RefSeq:   YP_001251974.1
- ProteinModelPortal:   A5IGX8
- SMR:   A5IGX8
- STRING:   A5IGX8
- GeneID:   5182498
- GenomeReviews:   CP000675_GR
- KEGG:   lpc:LPC_2717
- eggNOG:   COG1678
- HOGENOM:   HBG530212
- OMA:   LIAMPGM
- ProtClustDB:   CLSK832269
- BioCyc:   LPNE400673:LPC_2717-MONOMER
- HAMAP:   MF_00758
- InterPro:   IPR003774

Pfam domain/function: PF02622 DUF179

EC number: NA

Molecular weight: Translated: 21132; Mature: 21000

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIISSLANHLLIAMPSLKDPNFERSVVYLCEHNEQGSVGLIINRPLQFPLSIVFEQLQI
CHHHHHHHHHEEEEECCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHCC
EPIRVEKNGLPLLFGGPVQPERGFVIHKQMGGWRSSLFLQDEVTVTTSNDIIRAIAYDEG
EEEEEECCCCEEEECCCCCCCCCEEEEECCCCCCCEEEEECCEEEEECCCEEEEEECCCC
PKDVLITLGYAAWTEQQLEREIMSNTWLVCPYKSEILYEVPFEERWEYAGLTLGIKMNQL
CCEEEEEECCHHHHHHHHHHHHHHCCEEEEECCCCEEEECCHHHCCCCCCEEEEEEECCC
SSDAGHA
CCCCCCC
>Mature Secondary Structure 
AIISSLANHLLIAMPSLKDPNFERSVVYLCEHNEQGSVGLIINRPLQFPLSIVFEQLQI
HHHHHHHHHEEEEECCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHCC
EPIRVEKNGLPLLFGGPVQPERGFVIHKQMGGWRSSLFLQDEVTVTTSNDIIRAIAYDEG
EEEEEECCCCEEEECCCCCCCCCEEEEECCCCCCCEEEEECCEEEEECCCEEEEEECCCC
PKDVLITLGYAAWTEQQLEREIMSNTWLVCPYKSEILYEVPFEERWEYAGLTLGIKMNQL
CCEEEEEECCHHHHHHHHHHHHHHCCEEEEECCCCEEEECCHHHCCCCCCEEEEEEECCC
SSDAGHA
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA