Click here to switch to the map view.

The map label for this gene is 148360471

Identifier: 148360471

GI number: 148360471

Start: 1062361

End: 1062795

Strand: Direct

Name: 148360471

Synonym: LPC_2410

Alternate gene names: NA

Gene position: 1062361-1062795 (Clockwise)

Preceding gene: 148360473

Following gene: 148360470

Centisome position: 29.7

GC content: 44.6

Gene sequence:

>435_bases
ATGACACTGCAACGTTCCATACAAAAAGGGGTATCTGATTTTAGTTTTATTATTGGCACAGGTCTAAAGTATGGTGGTGC
TGGCGGTCTTTTAGTGATGGCTGTTGTAGGAACGGTTGCTATTGATCTTGTCTTGCTTGCTGCTGCAGAAAAACATCATA
ACAGTTTTTTGACAGGATTTGTGTTAGGCTCAATGTTTTCCAGAGGTAACTTGGATCCGGTTCCACTTTTGATCGCGTCC
CCCATCACATCAGCTGTTGCTGTCGTGTTATCTGTTGCCTTGGGCGTTCCCGGGGTCGGTCTTGCGATACTGGCTGGATG
GACTTTGGCTGGCACTTTATTGGCTGTTGGTATGGGCTTGGAAGCGTTTGCCAAATCCATTAATCCTGAACCTTCATCTG
AGTCAGATTACAATTCTTGTTTGTGCTTTAACTAA

Upstream 100 bases:

>100_bases
TGAGTTTTAATCCAATGTACTCGTTACTTCAGTGTTCAATTAGTGTTGATTATGTGCAAAATCACGTGTATTATTTTTCA
ATTTTTTAGGAGTAAGGTTA

Downstream 100 bases:

>100_bases
TAGAGCCAAGAGGGGAGAGCAGGTTATTTCCCCTCTTAAAACAGTTTATCAGAAAATTATTTTTATAAATATTGTATATA
CTATATAGTAATAATGGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 144; Mature: 143

Protein sequence:

>144_residues
MTLQRSIQKGVSDFSFIIGTGLKYGGAGGLLVMAVVGTVAIDLVLLAAAEKHHNSFLTGFVLGSMFSRGNLDPVPLLIAS
PITSAVAVVLSVALGVPGVGLAILAGWTLAGTLLAVGMGLEAFAKSINPEPSSESDYNSCLCFN

Sequences:

>Translated_144_residues
MTLQRSIQKGVSDFSFIIGTGLKYGGAGGLLVMAVVGTVAIDLVLLAAAEKHHNSFLTGFVLGSMFSRGNLDPVPLLIAS
PITSAVAVVLSVALGVPGVGLAILAGWTLAGTLLAVGMGLEAFAKSINPEPSSESDYNSCLCFN
>Mature_143_residues
TLQRSIQKGVSDFSFIIGTGLKYGGAGGLLVMAVVGTVAIDLVLLAAAEKHHNSFLTGFVLGSMFSRGNLDPVPLLIASP
ITSAVAVVLSVALGVPGVGLAILAGWTLAGTLLAVGMGLEAFAKSINPEPSSESDYNSCLCFN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14637; Mature: 14506

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLQRSIQKGVSDFSFIIGTGLKYGGAGGLLVMAVVGTVAIDLVLLAAAEKHHNSFLTGF
CCHHHHHHHCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLGSMFSRGNLDPVPLLIASPITSAVAVVLSVALGVPGVGLAILAGWTLAGTLLAVGMGL
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCH
EAFAKSINPEPSSESDYNSCLCFN
HHHHHHCCCCCCCCCCCCCEECCC
>Mature Secondary Structure 
TLQRSIQKGVSDFSFIIGTGLKYGGAGGLLVMAVVGTVAIDLVLLAAAEKHHNSFLTGF
CHHHHHHHCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLGSMFSRGNLDPVPLLIASPITSAVAVVLSVALGVPGVGLAILAGWTLAGTLLAVGMGL
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCH
EAFAKSINPEPSSESDYNSCLCFN
HHHHHHCCCCCCCCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA