| Definition | Legionella pneumophila str. Corby chromosome, complete genome. |
|---|---|
| Accession | NC_009494 |
| Length | 3,576,470 |
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The map label for this gene is sidC
Identifier: 148360028
GI number: 148360028
Start: 3012349
End: 3015078
Strand: Direct
Name: sidC
Synonym: LPC_1959
Alternate gene names: NA
Gene position: 3012349-3015078 (Clockwise)
Preceding gene: 148360029
Following gene: 148360022
Centisome position: 84.23
GC content: 36.26
Gene sequence:
>2730_bases ATGGTTGACGTAATCAAATTCAAAGAGCCGGAACGTTGTGACTATCTATATATTGATGAAAACAACAAAGTTCATATCCT TTTACCGATTGTAGGAGGAGATGAAATAGGTCTGGATAACACCTGTCAAACAGCAGTTGAGTTGATCACATTTTTCTATG GTAGTGCGCACAGTGGTGTGACTAAATATTCTGCCGAACACCAACTCAGTGAATACAAAAGGCAATTGGAAGAAGACATC AAAGCCATCAATAGTCAAAAGAAAATTTCACCCCATGCTTATGACGATTTATTAAAAGAGAAAAAAGAACGCCTGCAACA AATTGAAAAATACATTGAATTAATTCAAGTATTAAAAGGTCAAAATGCTGAACAAGATATCAGGCAACTCCGTACCGGAG GAATCCCAAAATTGCCCGCTGCTGTAAAGGAAATCATTAAATCCTCTGAAAATGCTTTTGCTGTGAGGCTTTCTCCTTAT GACAACGATAAATTTACTCGCTTTGATGACCCTTTATTCAATGTCAAAAGAAACATCTCTAAATACGATACGCCCTCAAG GCAAGCTCCTATTCCAATATACGAGGGATTAGGGTATCGCCTGCGTTCAACTCTGTTCCCGAAAGAGAAAACACCGACTC CAATCAATAAAAAATCACTTAGAGAAAAAGTAAAAAGCACTGTTCTTAGTCATTATAAAGAGGAAGATAGAATTGATGGA GAAAAAAGAGATGAAAAATTAAGCGAGTTAATTACTAAACTTCAAAATGAACTTGTAAAAGAGTTAGTAAAAATTGATCC TCAATATTCGAAGCTATCATTATCTAAAGATCCAAGAGGAAATGAAATAAATTACAATTATTTAGTTAATAGTTTAATGC TTGTAGATGACGACTCTAAAATTGGTGAGTGGATTGAAACGATTCTCGACTCTACAGTAGATTCGACTGTATGGGAAGCT CAAGCATCCAGCCCTTTCTATGATGGCGCTAAAGAAATAAAATCAGACAAAGAAGCAGACAGGATATCCATCAGAGTTCA GTACCTGTTGGCGGAAGCAAACATTTATTGTAAAACAAACAAATTATCGGACGCTAACTTCGGAGAATTTTTCGACAAAG AGCCTCATGCTACTGAAATTGCGAAAAGAGTAAAGGAAGGATTTACGCAAGGTGCAGAGATAGAACCAATTATATACGAC TACATTAACAACAACCATGCTGAATTGGGATTAAAATCCCCGTTAACAGGCGAACAACTACAAGAAATCACTGAGAAATT TACGAGACATTATAATACGATTAAGGAATCTCCTCATTTTGATGAGTTTTTTGTCGCAGATCCTGATAAAAAAGGCAATA TCTTTTGTCATCAAGGCAGAATCAGTTGTCATTTTCTGGATTTCTTTACTCGACATACCAAAGGCAATTATCCACTTGGT GATCTTGCAAATCATCAGGAATCTCTCCAAAAAGGAACCTCCAATCGGTTACATCACAAAAATGAGTTAGTAGCTCAGGG ATATGAGAGACTGGATCAATTCAAGAAAGAAGTTGTAAAACTACTGGCTGAGGATAAACCAAAAGAATTATTGGATTACT TGCTCACTAACTCACCCACAGGTGTTCCAAATTACTCCATGCTTTCAAAGGAAACTCAAAATTACATTGCTTACAATCGT AACTGGCCAGCCATTCAAAAAGAGCTGGAACAGACTACCAACATACCAGAGAATCAAAAACAAGATCTCCTAAGATTGCT TTCTCGTGATAATCTGAGCCACGATAATCTAAGCGCAATTACCTGGTCAAAATATTCCTCCAAGCCATTATTGGATGTGG AATTAAACAAAATCGCTGAAGGATTAGAACTCACTGCAAAAATTTACAATGAAAAAAGAGGAAGTGAATGGTGGTTTAAA GGTTCAAGAAATCAAGCTCGTAATACTCAATGTGAAGAATTGCAAAGAGTGGCTAAAGAAATCAATGCTCTTTTGCAAAA TGAAACTTTAACCAAAAGCCAGGTCCTTGAAAAAGTTTTAAACTCTATAGAAACATTGGATAAAATTGACAGAGACATTT CCGCCGAATCCAATTGGTTTAAAAGTACTTTGCAAAAGGAAGTCAGATTATTTCGGGATCAATTGAAAGATATTTGCCAA TTGGATAAGTATGCCTTTAAATCAACAAAACTTGATGAAATTATCTCTCTGGAAATGGAAGAACAATTTCAAAAGATAGA AGATCCTGTTGTTCAGAAAATTGTCAGGGACTTGCCTGCTCATTGCCACAATGATGAAGCAATTGAATTCTTTAAGACAT TGAACCCTGAAGAGGCAGCTAAAGTGGCTAGCTATTTAAGCCTGGAATACCGGGAAATTAATAAATCAACAGATAAGAAA ACTCTCCTTGAGCAAGATATTCCCAAACTGTTTAAAGAAGTAAATGCACTACTACTCTCCAAATTAAAAGAAGAAAAAGC CATTGATGAGCAAGTCCATGAAAAACTCAGTCAACTGGCTGACAAAATTCCTCCTGAGCATTTTACAAGAAATAACATTA TAAAATGGTCTGCTACCCCTGAAAAGCTTGAGGAATCAAATCTTAATGAGCTAATCAAATCAGTCGAAAGCCCTACTACT AAACAAACATCAAAACAATTCAGGGAAGCCATGGGTGAAATCACTGGAAGAAATGAGCCTCCTAAAGACACCCTTGGGCA TACAATATAG
Upstream 100 bases:
>100_bases AATCAAGCAAAAAGTGTAATTGCAACTCTTTTTGTTGTTTTATAAACAAATTGTCTTTATAATATACTTATAAACAAGAC ACTAGAAAATGGTGGTAAAC
Downstream 100 bases:
>100_bases CTTGATAGTATGAACTTGTTTGAATATTCCGGAAGATAGATACACTTTTTGGCTGTGAGAGGATTAGAATTATTCTCACA GCGTTCTTCTATCGCTGTAA
Product: Dot/Icm system substrate protein SidC
Products: NA
Alternate protein names: SidC Interaptin; SidC Homolog; SidC Protein
Number of amino acids: Translated: 909; Mature: 909
Protein sequence:
>909_residues MVDVIKFKEPERCDYLYIDENNKVHILLPIVGGDEIGLDNTCQTAVELITFFYGSAHSGVTKYSAEHQLSEYKRQLEEDI KAINSQKKISPHAYDDLLKEKKERLQQIEKYIELIQVLKGQNAEQDIRQLRTGGIPKLPAAVKEIIKSSENAFAVRLSPY DNDKFTRFDDPLFNVKRNISKYDTPSRQAPIPIYEGLGYRLRSTLFPKEKTPTPINKKSLREKVKSTVLSHYKEEDRIDG EKRDEKLSELITKLQNELVKELVKIDPQYSKLSLSKDPRGNEINYNYLVNSLMLVDDDSKIGEWIETILDSTVDSTVWEA QASSPFYDGAKEIKSDKEADRISIRVQYLLAEANIYCKTNKLSDANFGEFFDKEPHATEIAKRVKEGFTQGAEIEPIIYD YINNNHAELGLKSPLTGEQLQEITEKFTRHYNTIKESPHFDEFFVADPDKKGNIFCHQGRISCHFLDFFTRHTKGNYPLG DLANHQESLQKGTSNRLHHKNELVAQGYERLDQFKKEVVKLLAEDKPKELLDYLLTNSPTGVPNYSMLSKETQNYIAYNR NWPAIQKELEQTTNIPENQKQDLLRLLSRDNLSHDNLSAITWSKYSSKPLLDVELNKIAEGLELTAKIYNEKRGSEWWFK GSRNQARNTQCEELQRVAKEINALLQNETLTKSQVLEKVLNSIETLDKIDRDISAESNWFKSTLQKEVRLFRDQLKDICQ LDKYAFKSTKLDEIISLEMEEQFQKIEDPVVQKIVRDLPAHCHNDEAIEFFKTLNPEEAAKVASYLSLEYREINKSTDKK TLLEQDIPKLFKEVNALLLSKLKEEKAIDEQVHEKLSQLADKIPPEHFTRNNIIKWSATPEKLEESNLNELIKSVESPTT KQTSKQFREAMGEITGRNEPPKDTLGHTI
Sequences:
>Translated_909_residues MVDVIKFKEPERCDYLYIDENNKVHILLPIVGGDEIGLDNTCQTAVELITFFYGSAHSGVTKYSAEHQLSEYKRQLEEDI KAINSQKKISPHAYDDLLKEKKERLQQIEKYIELIQVLKGQNAEQDIRQLRTGGIPKLPAAVKEIIKSSENAFAVRLSPY DNDKFTRFDDPLFNVKRNISKYDTPSRQAPIPIYEGLGYRLRSTLFPKEKTPTPINKKSLREKVKSTVLSHYKEEDRIDG EKRDEKLSELITKLQNELVKELVKIDPQYSKLSLSKDPRGNEINYNYLVNSLMLVDDDSKIGEWIETILDSTVDSTVWEA QASSPFYDGAKEIKSDKEADRISIRVQYLLAEANIYCKTNKLSDANFGEFFDKEPHATEIAKRVKEGFTQGAEIEPIIYD YINNNHAELGLKSPLTGEQLQEITEKFTRHYNTIKESPHFDEFFVADPDKKGNIFCHQGRISCHFLDFFTRHTKGNYPLG DLANHQESLQKGTSNRLHHKNELVAQGYERLDQFKKEVVKLLAEDKPKELLDYLLTNSPTGVPNYSMLSKETQNYIAYNR NWPAIQKELEQTTNIPENQKQDLLRLLSRDNLSHDNLSAITWSKYSSKPLLDVELNKIAEGLELTAKIYNEKRGSEWWFK GSRNQARNTQCEELQRVAKEINALLQNETLTKSQVLEKVLNSIETLDKIDRDISAESNWFKSTLQKEVRLFRDQLKDICQ LDKYAFKSTKLDEIISLEMEEQFQKIEDPVVQKIVRDLPAHCHNDEAIEFFKTLNPEEAAKVASYLSLEYREINKSTDKK TLLEQDIPKLFKEVNALLLSKLKEEKAIDEQVHEKLSQLADKIPPEHFTRNNIIKWSATPEKLEESNLNELIKSVESPTT KQTSKQFREAMGEITGRNEPPKDTLGHTI >Mature_909_residues MVDVIKFKEPERCDYLYIDENNKVHILLPIVGGDEIGLDNTCQTAVELITFFYGSAHSGVTKYSAEHQLSEYKRQLEEDI KAINSQKKISPHAYDDLLKEKKERLQQIEKYIELIQVLKGQNAEQDIRQLRTGGIPKLPAAVKEIIKSSENAFAVRLSPY DNDKFTRFDDPLFNVKRNISKYDTPSRQAPIPIYEGLGYRLRSTLFPKEKTPTPINKKSLREKVKSTVLSHYKEEDRIDG EKRDEKLSELITKLQNELVKELVKIDPQYSKLSLSKDPRGNEINYNYLVNSLMLVDDDSKIGEWIETILDSTVDSTVWEA QASSPFYDGAKEIKSDKEADRISIRVQYLLAEANIYCKTNKLSDANFGEFFDKEPHATEIAKRVKEGFTQGAEIEPIIYD YINNNHAELGLKSPLTGEQLQEITEKFTRHYNTIKESPHFDEFFVADPDKKGNIFCHQGRISCHFLDFFTRHTKGNYPLG DLANHQESLQKGTSNRLHHKNELVAQGYERLDQFKKEVVKLLAEDKPKELLDYLLTNSPTGVPNYSMLSKETQNYIAYNR NWPAIQKELEQTTNIPENQKQDLLRLLSRDNLSHDNLSAITWSKYSSKPLLDVELNKIAEGLELTAKIYNEKRGSEWWFK GSRNQARNTQCEELQRVAKEINALLQNETLTKSQVLEKVLNSIETLDKIDRDISAESNWFKSTLQKEVRLFRDQLKDICQ LDKYAFKSTKLDEIISLEMEEQFQKIEDPVVQKIVRDLPAHCHNDEAIEFFKTLNPEEAAKVASYLSLEYREINKSTDKK TLLEQDIPKLFKEVNALLLSKLKEEKAIDEQVHEKLSQLADKIPPEHFTRNNIIKWSATPEKLEESNLNELIKSVESPTT KQTSKQFREAMGEITGRNEPPKDTLGHTI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 104992; Mature: 104992
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDVIKFKEPERCDYLYIDENNKVHILLPIVGGDEIGLDNTCQTAVELITFFYGSAHSGV CCCCCCCCCCCCCCEEEEECCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCC TKYSAEHQLSEYKRQLEEDIKAINSQKKISPHAYDDLLKEKKERLQQIEKYIELIQVLKG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QNAEQDIRQLRTGGIPKLPAAVKEIIKSSENAFAVRLSPYDNDKFTRFDDPLFNVKRNIS CCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHH KYDTPSRQAPIPIYEGLGYRLRSTLFPKEKTPTPINKKSLREKVKSTVLSHYKEEDRIDG HCCCCCCCCCCCHHHCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC EKRDEKLSELITKLQNELVKELVKIDPQYSKLSLSKDPRGNEINYNYLVNSLMLVDDDSK HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHHHEEECCCHH IGEWIETILDSTVDSTVWEAQASSPFYDGAKEIKSDKEADRISIRVQYLLAEANIYCKTN HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHEEEECCCEEEECC KLSDANFGEFFDKEPHATEIAKRVKEGFTQGAEIEPIIYDYINNNHAELGLKSPLTGEQL CCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHH QEITEKFTRHYNTIKESPHFDEFFVADPDKKGNIFCHQGRISCHFLDFFTRHTKGNYPLG HHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCEEEECCCCEEHHHHHHHHHCCCCCCCH DLANHQESLQKGTSNRLHHKNELVAQGYERLDQFKKEVVKLLAEDKPKELLDYLLTNSPT HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC GVPNYSMLSKETQNYIAYNRNWPAIQKELEQTTNIPENQKQDLLRLLSRDNLSHDNLSAI CCCCHHHHHHHHHHHEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEE TWSKYSSKPLLDVELNKIAEGLELTAKIYNEKRGSEWWFKGSRNQARNTQCEELQRVAKE EECCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH INALLQNETLTKSQVLEKVLNSIETLDKIDRDISAESNWFKSTLQKEVRLFRDQLKDICQ HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LDKYAFKSTKLDEIISLEMEEQFQKIEDPVVQKIVRDLPAHCHNDEAIEFFKTLNPEEAA HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHH KVASYLSLEYREINKSTDKKTLLEQDIPKLFKEVNALLLSKLKEEKAIDEQVHEKLSQLA HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DKIPPEHFTRNNIIKWSATPEKLEESNLNELIKSVESPTTKQTSKQFREAMGEITGRNEP HHCCCCCCCCCCEEEECCCHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC PKDTLGHTI CHHHCCCCC >Mature Secondary Structure MVDVIKFKEPERCDYLYIDENNKVHILLPIVGGDEIGLDNTCQTAVELITFFYGSAHSGV CCCCCCCCCCCCCCEEEEECCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCC TKYSAEHQLSEYKRQLEEDIKAINSQKKISPHAYDDLLKEKKERLQQIEKYIELIQVLKG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QNAEQDIRQLRTGGIPKLPAAVKEIIKSSENAFAVRLSPYDNDKFTRFDDPLFNVKRNIS CCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHH KYDTPSRQAPIPIYEGLGYRLRSTLFPKEKTPTPINKKSLREKVKSTVLSHYKEEDRIDG HCCCCCCCCCCCHHHCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC EKRDEKLSELITKLQNELVKELVKIDPQYSKLSLSKDPRGNEINYNYLVNSLMLVDDDSK HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHHHEEECCCHH IGEWIETILDSTVDSTVWEAQASSPFYDGAKEIKSDKEADRISIRVQYLLAEANIYCKTN HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHEEEECCCEEEECC KLSDANFGEFFDKEPHATEIAKRVKEGFTQGAEIEPIIYDYINNNHAELGLKSPLTGEQL CCCCCCCHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHH QEITEKFTRHYNTIKESPHFDEFFVADPDKKGNIFCHQGRISCHFLDFFTRHTKGNYPLG HHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCEEEECCCCEEHHHHHHHHHCCCCCCCH DLANHQESLQKGTSNRLHHKNELVAQGYERLDQFKKEVVKLLAEDKPKELLDYLLTNSPT HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCC GVPNYSMLSKETQNYIAYNRNWPAIQKELEQTTNIPENQKQDLLRLLSRDNLSHDNLSAI CCCCHHHHHHHHHHHEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEE TWSKYSSKPLLDVELNKIAEGLELTAKIYNEKRGSEWWFKGSRNQARNTQCEELQRVAKE EECCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH INALLQNETLTKSQVLEKVLNSIETLDKIDRDISAESNWFKSTLQKEVRLFRDQLKDICQ HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LDKYAFKSTKLDEIISLEMEEQFQKIEDPVVQKIVRDLPAHCHNDEAIEFFKTLNPEEAA HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHH KVASYLSLEYREINKSTDKKTLLEQDIPKLFKEVNALLLSKLKEEKAIDEQVHEKLSQLA HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DKIPPEHFTRNNIIKWSATPEKLEESNLNELIKSVESPTTKQTSKQFREAMGEITGRNEP HHCCCCCCCCCCEEEECCCHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC PKDTLGHTI CHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA