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The map label for this gene is ahpD [H]

Identifier: 148359890

GI number: 148359890

Start: 2767902

End: 2768417

Strand: Reverse

Name: ahpD [H]

Synonym: LPC_1818

Alternate gene names: 148359890

Gene position: 2768417-2767902 (Counterclockwise)

Preceding gene: 148359891

Following gene: 148359888

Centisome position: 77.41

GC content: 41.67

Gene sequence:

>516_bases
ATGTTAGAGAATGTTAAAGAAAGTATACCGGAAGTGGCTAAAGACATACGCTTGAATTTGACTAAGGTACTTGATCTGGA
ACAAAGTGATGGATTGAGTGAGCATCAGATTTTAGGTTCTGCATTGGCTGTGAGTTATTCTTTAGGCAATGAGGTTCTAA
TTAAAGGACTTAAAGAATTGGTGCATAACGAACAGATTGTGCGTGCAGCACAACTTGCGGCAAGCCTTATGGCGATGACT
AATATTTACTATCGCTTTGTTCATTTAACTGAAATTAAGGAAATTGAGCACATTCCTGCAGGATTGCGAATGCAAGGAAT
GATGACTCCAGGGGTAGACAGGGTAACCTTTGAAATATTGTCCCTTGCTGTTTCTGCTCTCAATGGTTGTGGGGCTTGTG
TCAGTTCTCACGCACGACAATTGAAAGAGCACGGCTTATCCGATACAAGCCTTGCACGAGTTGGACGTATTACTGCTGTG
ATTCATGCGGTTCATGTGAGTGCTCGAATCAAATAA

Upstream 100 bases:

>100_bases
GTTCTGGATGCTTTACAGACCGATGAACTTTGTCCATGTAATTGGAAAAAAGGTGAAGAAACAATTCATATCAAATAAAT
TGAAAAAAGAGGCATCAATC

Downstream 100 bases:

>100_bases
ATCATTGCATTTGAAGCAGATTATCTGCTTCAAATGTAAAAAACTATTTAATGACGCCGCAAGCTATACGGTCCCCCCCG
CCACCTTGTGGAGGATTGTC

Product: alkylhydroperoxidase AhpD family transporter core domain-containing protein

Products: NA

Alternate protein names: Alkylhydroperoxidase AhpD [H]

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MLENVKESIPEVAKDIRLNLTKVLDLEQSDGLSEHQILGSALAVSYSLGNEVLIKGLKELVHNEQIVRAAQLAASLMAMT
NIYYRFVHLTEIKEIEHIPAGLRMQGMMTPGVDRVTFEILSLAVSALNGCGACVSSHARQLKEHGLSDTSLARVGRITAV
IHAVHVSARIK

Sequences:

>Translated_171_residues
MLENVKESIPEVAKDIRLNLTKVLDLEQSDGLSEHQILGSALAVSYSLGNEVLIKGLKELVHNEQIVRAAQLAASLMAMT
NIYYRFVHLTEIKEIEHIPAGLRMQGMMTPGVDRVTFEILSLAVSALNGCGACVSSHARQLKEHGLSDTSLARVGRITAV
IHAVHVSARIK
>Mature_171_residues
MLENVKESIPEVAKDIRLNLTKVLDLEQSDGLSEHQILGSALAVSYSLGNEVLIKGLKELVHNEQIVRAAQLAASLMAMT
NIYYRFVHLTEIKEIEHIPAGLRMQGMMTPGVDRVTFEILSLAVSALNGCGACVSSHARQLKEHGLSDTSLARVGRITAV
IHAVHVSARIK

Specific function: Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity [H]

COG id: COG2128

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AhpD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004674
- InterPro:   IPR004675
- InterPro:   IPR003779 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: =1.11.1.15 [H]

Molecular weight: Translated: 18632; Mature: 18632

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLENVKESIPEVAKDIRLNLTKVLDLEQSDGLSEHQILGSALAVSYSLGNEVLIKGLKEL
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH
VHNEQIVRAAQLAASLMAMTNIYYRFVHLTEIKEIEHIPAGLRMQGMMTPGVDRVTFEIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHH
SLAVSALNGCGACVSSHARQLKEHGLSDTSLARVGRITAVIHAVHVSARIK
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLENVKESIPEVAKDIRLNLTKVLDLEQSDGLSEHQILGSALAVSYSLGNEVLIKGLKEL
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH
VHNEQIVRAAQLAASLMAMTNIYYRFVHLTEIKEIEHIPAGLRMQGMMTPGVDRVTFEIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHH
SLAVSALNGCGACVSSHARQLKEHGLSDTSLARVGRITAVIHAVHVSARIK
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA