BacMap

Definition	Legionella pneumophila str. Corby chromosome, complete genome.
Accession	NC_009494
Length	3,576,470

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The map label for this gene is dbpA [H]

Identifier: 148359632

GI number: 148359632

Start: 2416861

End: 2418267

Strand: Direct

Name: dbpA [H]

Synonym: LPC_1547

Alternate gene names: 148359632

Gene position: 2416861-2418267 (Clockwise)

Preceding gene: 148359631

Following gene: 148359633

Centisome position: 67.58

GC content: 38.66

Gene sequence:

>1407_bases
ATGATTCAATCAGAACACAACGACCAACACCTATCATTCTCTCAATTCCCCCTTCGTCAAGAATTAATAAAAAGTCTTGC
TTCTTCAAATTATGAAAATATGACCCCTATCCAAATGCAAAGCCTGCCCATAATTCTTAGAAATGAAGATATAATAGCTC
AAGCAAAAACAGGGAGTGGAAAGACCGCTGCTTTTGCTTTGTGTTTATTAAATAATTTAAAAATTTCATTTTTTGCAGTA
CAAGCCTTGGTTCTTTGCCCTACCCGTGAACTTGCGGAACAAGTAAGCCAAGCTATCCGTCGATTAGCCTGTTTGATGCC
TAATGTCAAAATTATTAATTTATCTGGTGGTATACCAATGCAGCCTCAGCTTGGTTCATTAAGGCATGGAGCTCATATTA
TTGTAGGAACACCGGGGAGAATACTTAAGCATTTAAAAAACGCCTCTTTAGACTTATCTCAGGTAAAAGCTTTAGTTTTG
GATGAGGCAGACAGAATGCTGGATATGGGTTTTTTTGATGACATTAAAAACATTATTTCGATTTGCCCCAAACAACGACA
AACCCTGCTTTTTTCTGCGACTTATCCTGAAGAAATCAAACGGCTTTCAAAACAATTTATGAAGGACCCGAAAGAAGTTC
ATGTGGTAACTCCTCCTGAAGAAATTGATATTGAACAACATTTTTATGAAGTCTCGAGACAGGCTCAGAAATTTCCCTTA
TTAAAATCATTACTGTTACACTATCGGCCCGTTTCAGTGTTAATCTTCTGTAATACCAAGCAACAAACAGTAGAAGTCAC
AGACCAGCTCATCAATGAAGGCTTCAGTGCCATCGCTTTAAATGGTGATATGGAACAAATCGAACGTGATCTTGCTGTCT
TGCGTTTTGCCAACCAAAGTTGTTCTATTCTTGTCGCCACTGATGTTGCAGCACGAGGACTTGATATAAAAGAACTTTCC
GCAGTGATTAATTTTGATCTCGCTTTTGATCATGACATCCATATTCATCGTATTGGTCGAACAGGACGAGCTGGGAGTAA
AGGCATTGCCTTAAGCATTGTAACTCCTGCAGATGCACAACGAATTTGCGCTATTGAAGATAACTACCCGCACCCCATTC
ATTGGGGAAACATTAATGAATTAGAAAATCACAACACTGCTTGCTTAGTGCCAGAAATGGTTACACTCTGTATCGCTTCC
GGTAAAAAAGATAAAATTCGCCCTGGTGACATCCTTGGGGCATTAACCAAAGATGCAGGATTAGCAGGCAACACAATTGG
CAAAATTAACATCACTGCTATGTACTCCTATGTTGCAATTCACCACAGCCAAGCTGATAAAGCCTACCAATATTTACAAA
GTGGAAAATTAAAAGGACGCAAAGTTAATGTACGTAAAATAAATTGA

Upstream 100 bases:

>100_bases
CAATTGTAAGCATCAGATTAAGCTTGTCCAAAATAAATTGATTTAAAATTGCACTAAGAAGTGCTAAGCTATTCACCTAT
TATAACAATAAGCACTTTCC

Downstream 100 bases:

>100_bases
TTTTTCTAAACCATGCGAAAAACTTACTGCAACAATTGAAAAAAGAAGCAGGTATTATGTAAAAGGCCTAATAATACAAA
CCTATGGATTTATTAGTGGC

Product: ATP-dependent RNA helicase DbpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 468; Mature: 468

Protein sequence:

>468_residues
MIQSEHNDQHLSFSQFPLRQELIKSLASSNYENMTPIQMQSLPIILRNEDIIAQAKTGSGKTAAFALCLLNNLKISFFAV
QALVLCPTRELAEQVSQAIRRLACLMPNVKIINLSGGIPMQPQLGSLRHGAHIIVGTPGRILKHLKNASLDLSQVKALVL
DEADRMLDMGFFDDIKNIISICPKQRQTLLFSATYPEEIKRLSKQFMKDPKEVHVVTPPEEIDIEQHFYEVSRQAQKFPL
LKSLLLHYRPVSVLIFCNTKQQTVEVTDQLINEGFSAIALNGDMEQIERDLAVLRFANQSCSILVATDVAARGLDIKELS
AVINFDLAFDHDIHIHRIGRTGRAGSKGIALSIVTPADAQRICAIEDNYPHPIHWGNINELENHNTACLVPEMVTLCIAS
GKKDKIRPGDILGALTKDAGLAGNTIGKINITAMYSYVAIHHSQADKAYQYLQSGKLKGRKVNVRKIN

Sequences:

>Translated_468_residues
MIQSEHNDQHLSFSQFPLRQELIKSLASSNYENMTPIQMQSLPIILRNEDIIAQAKTGSGKTAAFALCLLNNLKISFFAV
QALVLCPTRELAEQVSQAIRRLACLMPNVKIINLSGGIPMQPQLGSLRHGAHIIVGTPGRILKHLKNASLDLSQVKALVL
DEADRMLDMGFFDDIKNIISICPKQRQTLLFSATYPEEIKRLSKQFMKDPKEVHVVTPPEEIDIEQHFYEVSRQAQKFPL
LKSLLLHYRPVSVLIFCNTKQQTVEVTDQLINEGFSAIALNGDMEQIERDLAVLRFANQSCSILVATDVAARGLDIKELS
AVINFDLAFDHDIHIHRIGRTGRAGSKGIALSIVTPADAQRICAIEDNYPHPIHWGNINELENHNTACLVPEMVTLCIAS
GKKDKIRPGDILGALTKDAGLAGNTIGKINITAMYSYVAIHHSQADKAYQYLQSGKLKGRKVNVRKIN
>Mature_468_residues
MIQSEHNDQHLSFSQFPLRQELIKSLASSNYENMTPIQMQSLPIILRNEDIIAQAKTGSGKTAAFALCLLNNLKISFFAV
QALVLCPTRELAEQVSQAIRRLACLMPNVKIINLSGGIPMQPQLGSLRHGAHIIVGTPGRILKHLKNASLDLSQVKALVL
DEADRMLDMGFFDDIKNIISICPKQRQTLLFSATYPEEIKRLSKQFMKDPKEVHVVTPPEEIDIEQHFYEVSRQAQKFPL
LKSLLLHYRPVSVLIFCNTKQQTVEVTDQLINEGFSAIALNGDMEQIERDLAVLRFANQSCSILVATDVAARGLDIKELS
AVINFDLAFDHDIHIHRIGRTGRAGSKGIALSIVTPADAQRICAIEDNYPHPIHWGNINELENHNTACLVPEMVTLCIAS
GKKDKIRPGDILGALTKDAGLAGNTIGKINITAMYSYVAIHHSQADKAYQYLQSGKLKGRKVNVRKIN

Specific function: Has a helix-destabilizing activity, which is not coupled to the ATPase activity. Can unwind the 23S rRNA as well as 16S rRNA. Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA. Could play a major role in ribosome ass

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI7661920, Length=373, Percent_Identity=35.9249329758713, Blast_Score=250, Evalue=2e-66,
Organism=Homo sapiens, GI45446747, Length=362, Percent_Identity=39.7790055248619, Blast_Score=249, Evalue=5e-66,
Organism=Homo sapiens, GI45446743, Length=362, Percent_Identity=39.7790055248619, Blast_Score=249, Evalue=5e-66,
Organism=Homo sapiens, GI262118318, Length=359, Percent_Identity=38.4401114206128, Blast_Score=225, Evalue=6e-59,
Organism=Homo sapiens, GI262231852, Length=359, Percent_Identity=38.4401114206128, Blast_Score=225, Evalue=7e-59,
Organism=Homo sapiens, GI216548263, Length=359, Percent_Identity=38.4401114206128, Blast_Score=225, Evalue=8e-59,
Organism=Homo sapiens, GI13518015, Length=359, Percent_Identity=38.4401114206128, Blast_Score=225, Evalue=8e-59,
Organism=Homo sapiens, GI20149629, Length=338, Percent_Identity=39.0532544378698, Blast_Score=223, Evalue=4e-58,
Organism=Homo sapiens, GI164664518, Length=357, Percent_Identity=33.6134453781513, Blast_Score=222, Evalue=5e-58,
Organism=Homo sapiens, GI21071032, Length=361, Percent_Identity=36.2880886426593, Blast_Score=219, Evalue=3e-57,
Organism=Homo sapiens, GI4758112, Length=377, Percent_Identity=34.2175066312997, Blast_Score=219, Evalue=6e-57,
Organism=Homo sapiens, GI18375623, Length=377, Percent_Identity=34.2175066312997, Blast_Score=219, Evalue=6e-57,
Organism=Homo sapiens, GI41327771, Length=385, Percent_Identity=34.8051948051948, Blast_Score=218, Evalue=9e-57,
Organism=Homo sapiens, GI224593278, Length=358, Percent_Identity=38.5474860335196, Blast_Score=217, Evalue=2e-56,
Organism=Homo sapiens, GI50659095, Length=373, Percent_Identity=36.7292225201072, Blast_Score=217, Evalue=2e-56,
Organism=Homo sapiens, GI4758138, Length=363, Percent_Identity=33.6088154269972, Blast_Score=217, Evalue=2e-56,
Organism=Homo sapiens, GI148613856, Length=360, Percent_Identity=33.8888888888889, Blast_Score=216, Evalue=3e-56,
Organism=Homo sapiens, GI38201710, Length=360, Percent_Identity=33.8888888888889, Blast_Score=216, Evalue=3e-56,
Organism=Homo sapiens, GI4503529, Length=378, Percent_Identity=35.7142857142857, Blast_Score=216, Evalue=4e-56,
Organism=Homo sapiens, GI83700235, Length=373, Percent_Identity=36.4611260053619, Blast_Score=216, Evalue=4e-56,
Organism=Homo sapiens, GI21040371, Length=364, Percent_Identity=34.0659340659341, Blast_Score=215, Evalue=7e-56,
Organism=Homo sapiens, GI13129006, Length=379, Percent_Identity=36.1477572559367, Blast_Score=211, Evalue=2e-54,
Organism=Homo sapiens, GI41327773, Length=358, Percent_Identity=35.195530726257, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI301171475, Length=366, Percent_Identity=36.6120218579235, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI301171467, Length=366, Percent_Identity=36.6120218579235, Blast_Score=206, Evalue=3e-53,
Organism=Homo sapiens, GI87196351, Length=366, Percent_Identity=36.6120218579235, Blast_Score=206, Evalue=3e-53,
Organism=Homo sapiens, GI188035877, Length=350, Percent_Identity=36, Blast_Score=206, Evalue=4e-53,
Organism=Homo sapiens, GI169881239, Length=366, Percent_Identity=36.6120218579235, Blast_Score=204, Evalue=2e-52,
Organism=Homo sapiens, GI13514809, Length=366, Percent_Identity=36.6120218579235, Blast_Score=204, Evalue=2e-52,
Organism=Homo sapiens, GI31542656, Length=379, Percent_Identity=33.7730870712401, Blast_Score=201, Evalue=1e-51,
Organism=Homo sapiens, GI13514831, Length=365, Percent_Identity=36.1643835616438, Blast_Score=195, Evalue=9e-50,
Organism=Homo sapiens, GI222352149, Length=362, Percent_Identity=33.4254143646409, Blast_Score=190, Evalue=2e-48,
Organism=Homo sapiens, GI164419743, Length=360, Percent_Identity=33.3333333333333, Blast_Score=186, Evalue=3e-47,
Organism=Homo sapiens, GI51094101, Length=360, Percent_Identity=33.3333333333333, Blast_Score=186, Evalue=3e-47,
Organism=Homo sapiens, GI256223453, Length=349, Percent_Identity=30.6590257879656, Blast_Score=186, Evalue=4e-47,
Organism=Homo sapiens, GI8922886, Length=354, Percent_Identity=32.4858757062147, Blast_Score=186, Evalue=5e-47,
Organism=Homo sapiens, GI6005743, Length=354, Percent_Identity=32.2033898305085, Blast_Score=185, Evalue=9e-47,
Organism=Homo sapiens, GI41327779, Length=409, Percent_Identity=32.0293398533007, Blast_Score=184, Evalue=2e-46,
Organism=Homo sapiens, GI41327776, Length=338, Percent_Identity=34.6153846153846, Blast_Score=183, Evalue=3e-46,
Organism=Homo sapiens, GI55749865, Length=357, Percent_Identity=32.2128851540616, Blast_Score=182, Evalue=8e-46,
Organism=Homo sapiens, GI62241022, Length=331, Percent_Identity=33.2326283987915, Blast_Score=176, Evalue=3e-44,
Organism=Homo sapiens, GI38327634, Length=354, Percent_Identity=34.4632768361582, Blast_Score=176, Evalue=5e-44,
Organism=Homo sapiens, GI164419732, Length=363, Percent_Identity=30.3030303030303, Blast_Score=173, Evalue=3e-43,
Organism=Homo sapiens, GI62241024, Length=315, Percent_Identity=33.3333333333333, Blast_Score=172, Evalue=6e-43,
Organism=Homo sapiens, GI17505907, Length=440, Percent_Identity=28.8636363636364, Blast_Score=163, Evalue=3e-40,
Organism=Homo sapiens, GI38569503, Length=389, Percent_Identity=28.5347043701799, Blast_Score=155, Evalue=6e-38,
Organism=Homo sapiens, GI38569505, Length=389, Percent_Identity=28.5347043701799, Blast_Score=155, Evalue=8e-38,
Organism=Homo sapiens, GI9506931, Length=458, Percent_Identity=29.0393013100437, Blast_Score=155, Evalue=8e-38,
Organism=Homo sapiens, GI4826686, Length=334, Percent_Identity=30.5389221556886, Blast_Score=129, Evalue=5e-30,
Organism=Homo sapiens, GI256773275, Length=397, Percent_Identity=30.9823677581864, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI9966805, Length=313, Percent_Identity=32.9073482428115, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI20336298, Length=218, Percent_Identity=34.8623853211009, Blast_Score=117, Evalue=3e-26,
Organism=Homo sapiens, GI154759257, Length=409, Percent_Identity=24.4498777506112, Blast_Score=103, Evalue=5e-22,
Organism=Escherichia coli, GI1787605, Length=436, Percent_Identity=51.3761467889908, Blast_Score=439, Evalue=1e-124,
Organism=Escherichia coli, GI87082221, Length=347, Percent_Identity=44.6685878962536, Blast_Score=291, Evalue=9e-80,
Organism=Escherichia coli, GI1787016, Length=351, Percent_Identity=39.3162393162393, Blast_Score=251, Evalue=5e-68,
Organism=Escherichia coli, GI1790214, Length=374, Percent_Identity=35.8288770053476, Blast_Score=205, Evalue=5e-54,
Organism=Escherichia coli, GI1788930, Length=343, Percent_Identity=37.0262390670554, Blast_Score=201, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI71995724, Length=365, Percent_Identity=36.4383561643836, Blast_Score=256, Evalue=2e-68,
Organism=Caenorhabditis elegans, GI17507121, Length=365, Percent_Identity=36.4383561643836, Blast_Score=255, Evalue=3e-68,
Organism=Caenorhabditis elegans, GI71987143, Length=377, Percent_Identity=35.2785145888594, Blast_Score=252, Evalue=3e-67,
Organism=Caenorhabditis elegans, GI17552642, Length=360, Percent_Identity=40.2777777777778, Blast_Score=231, Evalue=5e-61,
Organism=Caenorhabditis elegans, GI32565321, Length=381, Percent_Identity=35.4330708661417, Blast_Score=226, Evalue=2e-59,
Organism=Caenorhabditis elegans, GI17555296, Length=359, Percent_Identity=36.7688022284123, Blast_Score=224, Evalue=7e-59,
Organism=Caenorhabditis elegans, GI115533224, Length=365, Percent_Identity=38.0821917808219, Blast_Score=222, Evalue=4e-58,
Organism=Caenorhabditis elegans, GI17510307, Length=364, Percent_Identity=37.9120879120879, Blast_Score=219, Evalue=2e-57,
Organism=Caenorhabditis elegans, GI17510309, Length=366, Percent_Identity=37.7049180327869, Blast_Score=219, Evalue=3e-57,
Organism=Caenorhabditis elegans, GI71995514, Length=366, Percent_Identity=37.7049180327869, Blast_Score=218, Evalue=4e-57,
Organism=Caenorhabditis elegans, GI71982858, Length=363, Percent_Identity=33.3333333333333, Blast_Score=216, Evalue=2e-56,
Organism=Caenorhabditis elegans, GI17552114, Length=356, Percent_Identity=31.4606741573034, Blast_Score=212, Evalue=3e-55,
Organism=Caenorhabditis elegans, GI86570094, Length=366, Percent_Identity=34.4262295081967, Blast_Score=208, Evalue=4e-54,
Organism=Caenorhabditis elegans, GI17507945, Length=334, Percent_Identity=37.125748502994, Blast_Score=201, Evalue=7e-52,
Organism=Caenorhabditis elegans, GI17510559, Length=378, Percent_Identity=32.5396825396825, Blast_Score=199, Evalue=2e-51,
Organism=Caenorhabditis elegans, GI71995718, Length=377, Percent_Identity=35.0132625994695, Blast_Score=199, Evalue=3e-51,
Organism=Caenorhabditis elegans, GI17507877, Length=374, Percent_Identity=35.0267379679144, Blast_Score=197, Evalue=8e-51,
Organism=Caenorhabditis elegans, GI17507879, Length=374, Percent_Identity=35.0267379679144, Blast_Score=193, Evalue=2e-49,
Organism=Caenorhabditis elegans, GI17536099, Length=383, Percent_Identity=30.5483028720627, Blast_Score=185, Evalue=5e-47,
Organism=Caenorhabditis elegans, GI17536101, Length=383, Percent_Identity=30.5483028720627, Blast_Score=185, Evalue=6e-47,
Organism=Caenorhabditis elegans, GI193206561, Length=348, Percent_Identity=31.0344827586207, Blast_Score=183, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI71999646, Length=359, Percent_Identity=31.7548746518106, Blast_Score=183, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI71999644, Length=345, Percent_Identity=32.1739130434783, Blast_Score=182, Evalue=3e-46,
Organism=Caenorhabditis elegans, GI17509811, Length=379, Percent_Identity=32.9815303430079, Blast_Score=181, Evalue=5e-46,
Organism=Caenorhabditis elegans, GI17536103, Length=389, Percent_Identity=30.5912596401028, Blast_Score=181, Evalue=7e-46,
Organism=Caenorhabditis elegans, GI17507881, Length=381, Percent_Identity=32.8083989501312, Blast_Score=179, Evalue=3e-45,
Organism=Caenorhabditis elegans, GI17537549, Length=369, Percent_Identity=30.6233062330623, Blast_Score=178, Evalue=4e-45,
Organism=Caenorhabditis elegans, GI17553716, Length=360, Percent_Identity=29.7222222222222, Blast_Score=177, Evalue=1e-44,
Organism=Caenorhabditis elegans, GI115532546, Length=373, Percent_Identity=32.171581769437, Blast_Score=171, Evalue=6e-43,
Organism=Caenorhabditis elegans, GI115532548, Length=373, Percent_Identity=32.171581769437, Blast_Score=170, Evalue=1e-42,
Organism=Caenorhabditis elegans, GI17505370, Length=350, Percent_Identity=33.1428571428571, Blast_Score=160, Evalue=1e-39,
Organism=Caenorhabditis elegans, GI17508543, Length=379, Percent_Identity=30.6068601583113, Blast_Score=153, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI193208216, Length=381, Percent_Identity=29.9212598425197, Blast_Score=148, Evalue=7e-36,
Organism=Caenorhabditis elegans, GI71982862, Length=211, Percent_Identity=34.5971563981043, Blast_Score=142, Evalue=4e-34,
Organism=Caenorhabditis elegans, GI17556951, Length=341, Percent_Identity=29.6187683284457, Blast_Score=141, Evalue=8e-34,
Organism=Caenorhabditis elegans, GI25148203, Length=407, Percent_Identity=26.7813267813268, Blast_Score=137, Evalue=9e-33,
Organism=Caenorhabditis elegans, GI71990816, Length=381, Percent_Identity=31.758530183727, Blast_Score=125, Evalue=7e-29,
Organism=Caenorhabditis elegans, GI17507641, Length=400, Percent_Identity=27.25, Blast_Score=119, Evalue=5e-27,
Organism=Caenorhabditis elegans, GI32564046, Length=380, Percent_Identity=27.6315789473684, Blast_Score=115, Evalue=4e-26,
Organism=Caenorhabditis elegans, GI25148291, Length=358, Percent_Identity=26.8156424581006, Blast_Score=106, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI71997889, Length=392, Percent_Identity=26.0204081632653, Blast_Score=105, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI25148205, Length=328, Percent_Identity=25.9146341463415, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI71987152, Length=95, Percent_Identity=45.2631578947368, Blast_Score=94, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6320224, Length=379, Percent_Identity=35.3562005277045, Blast_Score=243, Evalue=4e-65,
Organism=Saccharomyces cerevisiae, GI6325138, Length=364, Percent_Identity=39.2857142857143, Blast_Score=228, Evalue=1e-60,
Organism=Saccharomyces cerevisiae, GI6321856, Length=358, Percent_Identity=39.9441340782123, Blast_Score=228, Evalue=2e-60,
Organism=Saccharomyces cerevisiae, GI6324778, Length=362, Percent_Identity=38.6740331491713, Blast_Score=221, Evalue=2e-58,
Organism=Saccharomyces cerevisiae, GI6324217, Length=357, Percent_Identity=35.2941176470588, Blast_Score=219, Evalue=9e-58,
Organism=Saccharomyces cerevisiae, GI6320041, Length=364, Percent_Identity=32.967032967033, Blast_Score=215, Evalue=1e-56,
Organism=Saccharomyces cerevisiae, GI6321360, Length=342, Percent_Identity=38.8888888888889, Blast_Score=208, Evalue=1e-54,
Organism=Saccharomyces cerevisiae, GI6322912, Length=376, Percent_Identity=34.0425531914894, Blast_Score=207, Evalue=2e-54,
Organism=Saccharomyces cerevisiae, GI6322323, Length=376, Percent_Identity=34.0425531914894, Blast_Score=207, Evalue=2e-54,
Organism=Saccharomyces cerevisiae, GI6323021, Length=377, Percent_Identity=34.4827586206897, Blast_Score=206, Evalue=4e-54,
Organism=Saccharomyces cerevisiae, GI6320119, Length=360, Percent_Identity=32.7777777777778, Blast_Score=201, Evalue=3e-52,
Organism=Saccharomyces cerevisiae, GI6324620, Length=353, Percent_Identity=33.1444759206799, Blast_Score=189, Evalue=6e-49,
Organism=Saccharomyces cerevisiae, GI6321963, Length=395, Percent_Identity=35.6962025316456, Blast_Score=187, Evalue=4e-48,
Organism=Saccharomyces cerevisiae, GI6320449, Length=354, Percent_Identity=34.180790960452, Blast_Score=187, Evalue=4e-48,
Organism=Saccharomyces cerevisiae, GI6322427, Length=368, Percent_Identity=34.7826086956522, Blast_Score=182, Evalue=1e-46,
Organism=Saccharomyces cerevisiae, GI6323947, Length=360, Percent_Identity=33.6111111111111, Blast_Score=178, Evalue=1e-45,
Organism=Saccharomyces cerevisiae, GI6319618, Length=414, Percent_Identity=32.3671497584541, Blast_Score=174, Evalue=3e-44,
Organism=Saccharomyces cerevisiae, GI6321111, Length=377, Percent_Identity=31.0344827586207, Blast_Score=164, Evalue=3e-41,
Organism=Saccharomyces cerevisiae, GI6319714, Length=355, Percent_Identity=27.887323943662, Blast_Score=151, Evalue=2e-37,
Organism=Saccharomyces cerevisiae, GI6321267, Length=367, Percent_Identity=31.0626702997275, Blast_Score=145, Evalue=1e-35,
Organism=Saccharomyces cerevisiae, GI6320400, Length=384, Percent_Identity=29.1666666666667, Blast_Score=138, Evalue=1e-33,
Organism=Saccharomyces cerevisiae, GI6320173, Length=191, Percent_Identity=38.2198952879581, Blast_Score=134, Evalue=4e-32,
Organism=Saccharomyces cerevisiae, GI6323306, Length=424, Percent_Identity=26.6509433962264, Blast_Score=130, Evalue=5e-31,
Organism=Saccharomyces cerevisiae, GI6322876, Length=471, Percent_Identity=27.3885350318471, Blast_Score=129, Evalue=1e-30,
Organism=Saccharomyces cerevisiae, GI6324366, Length=356, Percent_Identity=25.8426966292135, Blast_Score=102, Evalue=1e-22,
Organism=Saccharomyces cerevisiae, GI6321374, Length=383, Percent_Identity=23.4986945169713, Blast_Score=87, Evalue=8e-18,
Organism=Drosophila melanogaster, GI24645031, Length=365, Percent_Identity=36.7123287671233, Blast_Score=248, Evalue=5e-66,
Organism=Drosophila melanogaster, GI24662330, Length=359, Percent_Identity=39.8328690807799, Blast_Score=238, Evalue=6e-63,
Organism=Drosophila melanogaster, GI24584399, Length=440, Percent_Identity=33.4090909090909, Blast_Score=226, Evalue=3e-59,
Organism=Drosophila melanogaster, GI17977678, Length=365, Percent_Identity=36.1643835616438, Blast_Score=224, Evalue=9e-59,
Organism=Drosophila melanogaster, GI24585582, Length=360, Percent_Identity=36.9444444444444, Blast_Score=221, Evalue=6e-58,
Organism=Drosophila melanogaster, GI24642151, Length=359, Percent_Identity=34.8189415041783, Blast_Score=217, Evalue=1e-56,
Organism=Drosophila melanogaster, GI24584994, Length=382, Percent_Identity=36.1256544502618, Blast_Score=217, Evalue=2e-56,
Organism=Drosophila melanogaster, GI24582080, Length=372, Percent_Identity=34.9462365591398, Blast_Score=216, Evalue=2e-56,
Organism=Drosophila melanogaster, GI24582078, Length=372, Percent_Identity=34.9462365591398, Blast_Score=216, Evalue=2e-56,
Organism=Drosophila melanogaster, GI17136248, Length=372, Percent_Identity=34.9462365591398, Blast_Score=216, Evalue=2e-56,
Organism=Drosophila melanogaster, GI24582075, Length=372, Percent_Identity=34.9462365591398, Blast_Score=216, Evalue=2e-56,
Organism=Drosophila melanogaster, GI21356161, Length=358, Percent_Identity=37.1508379888268, Blast_Score=212, Evalue=4e-55,
Organism=Drosophila melanogaster, GI281361218, Length=369, Percent_Identity=36.0433604336043, Blast_Score=211, Evalue=7e-55,
Organism=Drosophila melanogaster, GI24644481, Length=369, Percent_Identity=36.0433604336043, Blast_Score=211, Evalue=7e-55,
Organism=Drosophila melanogaster, GI24644487, Length=369, Percent_Identity=36.0433604336043, Blast_Score=211, Evalue=7e-55,
Organism=Drosophila melanogaster, GI45551833, Length=369, Percent_Identity=36.0433604336043, Blast_Score=211, Evalue=7e-55,
Organism=Drosophila melanogaster, GI24644485, Length=369, Percent_Identity=36.0433604336043, Blast_Score=211, Evalue=7e-55,
Organism=Drosophila melanogaster, GI24644483, Length=369, Percent_Identity=36.0433604336043, Blast_Score=211, Evalue=8e-55,
Organism=Drosophila melanogaster, GI18857967, Length=367, Percent_Identity=34.8773841961853, Blast_Score=211, Evalue=8e-55,
Organism=Drosophila melanogaster, GI24644479, Length=369, Percent_Identity=36.0433604336043, Blast_Score=211, Evalue=8e-55,
Organism=Drosophila melanogaster, GI21355075, Length=355, Percent_Identity=33.5211267605634, Blast_Score=208, Evalue=6e-54,
Organism=Drosophila melanogaster, GI24583279, Length=348, Percent_Identity=32.4712643678161, Blast_Score=208, Evalue=6e-54,
Organism=Drosophila melanogaster, GI24583281, Length=349, Percent_Identity=32.378223495702, Blast_Score=208, Evalue=6e-54,
Organism=Drosophila melanogaster, GI24581954, Length=366, Percent_Identity=34.9726775956284, Blast_Score=206, Evalue=2e-53,
Organism=Drosophila melanogaster, GI24581952, Length=366, Percent_Identity=34.9726775956284, Blast_Score=206, Evalue=2e-53,
Organism=Drosophila melanogaster, GI24581956, Length=366, Percent_Identity=34.9726775956284, Blast_Score=206, Evalue=2e-53,
Organism=Drosophila melanogaster, GI28574962, Length=364, Percent_Identity=35.1648351648352, Blast_Score=206, Evalue=3e-53,
Organism=Drosophila melanogaster, GI17985987, Length=383, Percent_Identity=36.5535248041775, Blast_Score=201, Evalue=6e-52,
Organism=Drosophila melanogaster, GI28575014, Length=369, Percent_Identity=33.8753387533875, Blast_Score=194, Evalue=1e-49,
Organism=Drosophila melanogaster, GI17136814, Length=381, Percent_Identity=37.5328083989501, Blast_Score=190, Evalue=1e-48,
Organism=Drosophila melanogaster, GI28571808, Length=346, Percent_Identity=32.9479768786127, Blast_Score=170, Evalue=2e-42,
Organism=Drosophila melanogaster, GI28571809, Length=346, Percent_Identity=32.9479768786127, Blast_Score=170, Evalue=2e-42,
Organism=Drosophila melanogaster, GI21355559, Length=398, Percent_Identity=32.6633165829146, Blast_Score=170, Evalue=2e-42,
Organism=Drosophila melanogaster, GI281365720, Length=315, Percent_Identity=34.9206349206349, Blast_Score=167, Evalue=1e-41,
Organism=Drosophila melanogaster, GI24666101, Length=364, Percent_Identity=31.043956043956, Blast_Score=164, Evalue=1e-40,
Organism=Drosophila melanogaster, GI24642822, Length=378, Percent_Identity=31.4814814814815, Blast_Score=163, Evalue=3e-40,
Organism=Drosophila melanogaster, GI17647335, Length=364, Percent_Identity=30.2197802197802, Blast_Score=160, Evalue=1e-39,
Organism=Drosophila melanogaster, GI24643725, Length=392, Percent_Identity=28.8265306122449, Blast_Score=137, Evalue=2e-32,
Organism=Drosophila melanogaster, GI19920478, Length=339, Percent_Identity=30.9734513274336, Blast_Score=129, Evalue=5e-30,
Organism=Drosophila melanogaster, GI24668515, Length=328, Percent_Identity=31.7073170731707, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI28571338, Length=197, Percent_Identity=35.0253807106599, Blast_Score=115, Evalue=6e-26,
Organism=Drosophila melanogaster, GI18859659, Length=197, Percent_Identity=35.0253807106599, Blast_Score=115, Evalue=6e-26,
Organism=Drosophila melanogaster, GI17136666, Length=411, Percent_Identity=27.9805352798054, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI20130173, Length=314, Percent_Identity=27.0700636942675, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24640164, Length=358, Percent_Identity=23.463687150838, Blast_Score=86, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005580
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 52005; Mature: 52005

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQSEHNDQHLSFSQFPLRQELIKSLASSNYENMTPIQMQSLPIILRNEDIIAQAKTGSG
CCCCCCCCCCCCHHCCCHHHHHHHHHHHCCCCCCCCEECCCCCEEEECCCEEEEECCCCC
KTAAFALCLLNNLKISFFAVQALVLCPTRELAEQVSQAIRRLACLMPNVKIINLSGGIPM
CHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC
QPQLGSLRHGAHIIVGTPGRILKHLKNASLDLSQVKALVLDEADRMLDMGFFDDIKNIIS
CCCCCCCCCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
ICPKQRQTLLFSATYPEEIKRLSKQFMKDPKEVHVVTPPEEIDIEQHFYEVSRQAQKFPL
HCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCHHCCHHHHHHHHHHHHHHCHH
LKSLLLHYRPVSVLIFCNTKQQTVEVTDQLINEGFSAIALNGDMEQIERDLAVLRFANQS
HHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCC
CSILVATDVAARGLDIKELSAVINFDLAFDHDIHIHRIGRTGRAGSKGIALSIVTPADAQ
CEEEEEECHHHCCCCHHHHHHHHEEEEEECCCEEEEEECCCCCCCCCCEEEEEECCCCCC
RICAIEDNYPHPIHWGNINELENHNTACLVPEMVTLCIASGKKDKIRPGDILGALTKDAG
EEEEEECCCCCCEECCCCCHHCCCCCEEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCC
LAGNTIGKINITAMYSYVAIHHSQADKAYQYLQSGKLKGRKVNVRKIN
CCCCCCCEEEEEEEEEEHEEECCHHHHHHHHHHCCCCCCCEEEEEECC
>Mature Secondary Structure
MIQSEHNDQHLSFSQFPLRQELIKSLASSNYENMTPIQMQSLPIILRNEDIIAQAKTGSG
CCCCCCCCCCCCHHCCCHHHHHHHHHHHCCCCCCCCEECCCCCEEEECCCEEEEECCCCC
KTAAFALCLLNNLKISFFAVQALVLCPTRELAEQVSQAIRRLACLMPNVKIINLSGGIPM
CHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC
QPQLGSLRHGAHIIVGTPGRILKHLKNASLDLSQVKALVLDEADRMLDMGFFDDIKNIIS
CCCCCCCCCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
ICPKQRQTLLFSATYPEEIKRLSKQFMKDPKEVHVVTPPEEIDIEQHFYEVSRQAQKFPL
HCCCCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCHHCCHHHHHHHHHHHHHHCHH
LKSLLLHYRPVSVLIFCNTKQQTVEVTDQLINEGFSAIALNGDMEQIERDLAVLRFANQS
HHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCC
CSILVATDVAARGLDIKELSAVINFDLAFDHDIHIHRIGRTGRAGSKGIALSIVTPADAQ
CEEEEEECHHHCCCCHHHHHHHHEEEEEECCCEEEEEECCCCCCCCCCEEEEEECCCCCC
RICAIEDNYPHPIHWGNINELENHNTACLVPEMVTLCIASGKKDKIRPGDILGALTKDAG
EEEEEECCCCCCEECCCCCHHCCCCCEEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCC
LAGNTIGKINITAMYSYVAIHHSQADKAYQYLQSGKLKGRKVNVRKIN
CCCCCCCEEEEEEEEEEHEEECCHHHHHHHHHHCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2216714; 8253085; 9097039; 9278503; 9016593; 11350034 [H]