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The map label for this gene is trpH [H]

Identifier: 148358973

GI number: 148358973

Start: 1656001

End: 1656840

Strand: Direct

Name: trpH [H]

Synonym: LPC_0858

Alternate gene names: 148358973

Gene position: 1656001-1656840 (Clockwise)

Preceding gene: 148358961

Following gene: 148358974

Centisome position: 46.3

GC content: 40.95

Gene sequence:

>840_bases
ATGATCGATCTTCATTGTCATAGTTCTTTTTCAGACGGTGCACTGACTCCAGAAGAACTAATAAAAAGAGCGAGTACTTT
ACAAGTTCAATGCCTATCTCTTACTGATCATGATACTATTGCAGGATATGACGCTTTATATGACGCAGCAATCCATACAA
ACATTGAAATAGTTAAAGGGATAGAACTCAGTACTCGTTGGAAGAAGTATGACATTCATATACTTGGTTACCAAATTAAT
CACACAGCAGAATTACAAGAGTTAATTGCTCATCAAAACAAAAGTCGAATAGAGCGTGCCGAGAAAATTGGAGAATCCTT
GCATTCGATTGGTATTGACAAAGCTTATGAAAAAGCCTGTCTTTTGGCAGGCCACAAACGGGTGGGTCGACCCCATTTTG
CCCAAGTACTGATTAATGAAGGGAAGGCAAAAGATATGAAGTCGGCTTTTAAAAATTACCTCGGGAGAGGCAAGTGCGCC
TATATACCTACCTTATGGATTAGCATGCACGATGCGGTCAAAGGTATATCTCATTCTGGTGGACAGGCTGTAATTGCTCA
TCCACTTAAATATGGATTGACGCGTTCAAAATTGCGTGAGTTAATCACGGAGTTTAAAGAGGCTGGAGGTGTTGGCATGG
AAGTCGTTTCTGGAGAAATGACAACTGCACAAATTCAAGAAATGGCCGGGATGTGTGAGCGATTTCATTTGCTTGCCTCA
TCAGGTTCAGATTACCATAGTGACGCTCAATCTTGTATAAATCTGGGGCGTCAGCGACAATTACCAATAATATGCACGCC
TATTTGGCAAGAATGGAACATGAAACAGGGGACTTTATGA

Upstream 100 bases:

>100_bases
GGATAACGTGCGTTTAGCGACATAAAAGTCATAAAAGCCTTTTATGTCGAACTCACGTTAATTATGCTATACTTCGATTT
TTTTAAATTAGCTGCGATTT

Downstream 100 bases:

>100_bases
GTCAGTTTTTTGCTTTACATCCAGATAATCCTCAAGCACGCTTGTTGAGAAAAGCAGTTTCAATTATTGAAGAAGGGGGG
CTTATCGTTTACCCGACAGA

Product: metal dependent phosphoesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MIDLHCHSSFSDGALTPEELIKRASTLQVQCLSLTDHDTIAGYDALYDAAIHTNIEIVKGIELSTRWKKYDIHILGYQIN
HTAELQELIAHQNKSRIERAEKIGESLHSIGIDKAYEKACLLAGHKRVGRPHFAQVLINEGKAKDMKSAFKNYLGRGKCA
YIPTLWISMHDAVKGISHSGGQAVIAHPLKYGLTRSKLRELITEFKEAGGVGMEVVSGEMTTAQIQEMAGMCERFHLLAS
SGSDYHSDAQSCINLGRQRQLPIICTPIWQEWNMKQGTL

Sequences:

>Translated_279_residues
MIDLHCHSSFSDGALTPEELIKRASTLQVQCLSLTDHDTIAGYDALYDAAIHTNIEIVKGIELSTRWKKYDIHILGYQIN
HTAELQELIAHQNKSRIERAEKIGESLHSIGIDKAYEKACLLAGHKRVGRPHFAQVLINEGKAKDMKSAFKNYLGRGKCA
YIPTLWISMHDAVKGISHSGGQAVIAHPLKYGLTRSKLRELITEFKEAGGVGMEVVSGEMTTAQIQEMAGMCERFHLLAS
SGSDYHSDAQSCINLGRQRQLPIICTPIWQEWNMKQGTL
>Mature_279_residues
MIDLHCHSSFSDGALTPEELIKRASTLQVQCLSLTDHDTIAGYDALYDAAIHTNIEIVKGIELSTRWKKYDIHILGYQIN
HTAELQELIAHQNKSRIERAEKIGESLHSIGIDKAYEKACLLAGHKRVGRPHFAQVLINEGKAKDMKSAFKNYLGRGKCA
YIPTLWISMHDAVKGISHSGGQAVIAHPLKYGLTRSKLRELITEFKEAGGVGMEVVSGEMTTAQIQEMAGMCERFHLLAS
SGSDYHSDAQSCINLGRQRQLPIICTPIWQEWNMKQGTL

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

Organism=Escherichia coli, GI1787520, Length=283, Percent_Identity=39.5759717314488, Blast_Score=201, Evalue=6e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 31067; Mature: 31067

Theoretical pI: Translated: 7.65; Mature: 7.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDLHCHSSFSDGALTPEELIKRASTLQVQCLSLTDHDTIAGYDALYDAAIHTNIEIVKG
CEEEEECCCCCCCCCCHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHCCEEEEEC
IELSTRWKKYDIHILGYQINHTAELQELIAHQNKSRIERAEKIGESLHSIGIDKAYEKAC
CCCCCCEEEEEEEEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHH
LLAGHKRVGRPHFAQVLINEGKAKDMKSAFKNYLGRGKCAYIPTLWISMHDAVKGISHSG
HHHCHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCCC
GQAVIAHPLKYGLTRSKLRELITEFKEAGGVGMEVVSGEMTTAQIQEMAGMCERFHLLAS
CCEEEEHHHHHCCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHC
SGSDYHSDAQSCINLGRQRQLPIICTPIWQEWNMKQGTL
CCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MIDLHCHSSFSDGALTPEELIKRASTLQVQCLSLTDHDTIAGYDALYDAAIHTNIEIVKG
CEEEEECCCCCCCCCCHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHCCEEEEEC
IELSTRWKKYDIHILGYQINHTAELQELIAHQNKSRIERAEKIGESLHSIGIDKAYEKAC
CCCCCCEEEEEEEEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHH
LLAGHKRVGRPHFAQVLINEGKAKDMKSAFKNYLGRGKCAYIPTLWISMHDAVKGISHSG
HHHCHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHCCCCCC
GQAVIAHPLKYGLTRSKLRELITEFKEAGGVGMEVVSGEMTTAQIQEMAGMCERFHLLAS
CCEEEEHHHHHCCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHC
SGSDYHSDAQSCINLGRQRQLPIICTPIWQEWNMKQGTL
CCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]