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The map label for this gene is dnaQ [H]

Identifier: 148358915

GI number: 148358915

Start: 1596828

End: 1597529

Strand: Direct

Name: dnaQ [H]

Synonym: LPC_0800

Alternate gene names: 148358915

Gene position: 1596828-1597529 (Clockwise)

Preceding gene: 148358914

Following gene: 148358917

Centisome position: 44.65

GC content: 33.76

Gene sequence:

>702_bases
ATGAGACAAGTTATATTAGATACCGAAACGACTGGTATTGGACCTGAACAGGGACATAGAGTAATTGAAATAGGTTGTAT
TGAGCTTATCGATAGAAAATTAACCGGCAAGCACTTCCACATATACCTTAATCCACAGCGTGAAGTGGATGAAGGGGCAT
TTAGAGTTCACGGTATAAGTACTGAATTTTTGCAAGATAAACCTTTATTCCAGGATATTGTGACTGAATTTATACAATTT
GTGGAAGGTTCAGAATTAATTATTCACAATGCTCCATTTGATGTTGGATTTCTGAATTCTGAATTAAAACATGTGAAATG
GAATAAGACATTAGAAGATTATTGCCGAATTCTTGATACTTTGATTTTAGCCAGAGAAAAACATCCTGGACAGCGTAATA
GTTTGGATGCTTTGTGTAAACGTTATGAAATAGATCATTTTAATCGTGAACTACATGGTGCTTTGCTTGATGCCGAAATA
TTAGCTTATGTGTATTTGGCAATGACAGGTGGCCAAAGCAGTTTATTTACTGAGGTTGAATCCAGTATGAGCCATTCAAA
AATAAAAACTCAAGAGATAAAGTCATTAAGTTTAAAAAAACCAGTAATAATGAAGGCTAATGAAGAGGAATTAATTCAAC
ATCAAAGTTTCGTTGAATTTATATCTAAAAAATCCGGTATCAATCATTGGGAAGAGGTATAG

Upstream 100 bases:

>100_bases
AATATTCATTGGCATTGGGTTAAAGGGCACTCAGGTCATTTGGAAAATGATTTGGTTGATGCTTTGGCAAATTTGGGTAT
TGAGGAGTTATCATAGAGTT

Downstream 100 bases:

>100_bases
CTCTCATGATTATATAAATTATAAATAATTATTCTGTTACGCTTATTATTCGGTTTCGCGTCTGCCAATACTAAGCCTTA
TACAATAACAAAATTCTTCA

Product: DNA polymerase III subunit epsilon

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MRQVILDTETTGIGPEQGHRVIEIGCIELIDRKLTGKHFHIYLNPQREVDEGAFRVHGISTEFLQDKPLFQDIVTEFIQF
VEGSELIIHNAPFDVGFLNSELKHVKWNKTLEDYCRILDTLILAREKHPGQRNSLDALCKRYEIDHFNRELHGALLDAEI
LAYVYLAMTGGQSSLFTEVESSMSHSKIKTQEIKSLSLKKPVIMKANEEELIQHQSFVEFISKKSGINHWEEV

Sequences:

>Translated_233_residues
MRQVILDTETTGIGPEQGHRVIEIGCIELIDRKLTGKHFHIYLNPQREVDEGAFRVHGISTEFLQDKPLFQDIVTEFIQF
VEGSELIIHNAPFDVGFLNSELKHVKWNKTLEDYCRILDTLILAREKHPGQRNSLDALCKRYEIDHFNRELHGALLDAEI
LAYVYLAMTGGQSSLFTEVESSMSHSKIKTQEIKSLSLKKPVIMKANEEELIQHQSFVEFISKKSGINHWEEV
>Mature_233_residues
MRQVILDTETTGIGPEQGHRVIEIGCIELIDRKLTGKHFHIYLNPQREVDEGAFRVHGISTEFLQDKPLFQDIVTEFIQF
VEGSELIIHNAPFDVGFLNSELKHVKWNKTLEDYCRILDTLILAREKHPGQRNSLDALCKRYEIDHFNRELHGALLDAEI
LAYVYLAMTGGQSSLFTEVESSMSHSKIKTQEIKSLSLKKPVIMKANEEELIQHQSFVEFISKKSGINHWEEV

Specific function: DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease [H]

COG id: COG0847

COG function: function code L; DNA polymerase III, epsilon subunit and related 3'-5' exonucleases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786409, Length=236, Percent_Identity=48.3050847457627, Blast_Score=230, Evalue=7e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006054
- InterPro:   IPR006309
- InterPro:   IPR006055
- InterPro:   IPR013520
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00929 Exonuc_X-T [H]

EC number: =2.7.7.7 [H]

Molecular weight: Translated: 26815; Mature: 26815

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQVILDTETTGIGPEQGHRVIEIGCIELIDRKLTGKHFHIYLNPQREVDEGAFRVHGIS
CCEEEEECCCCCCCHHHCCEEEEEHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEECCC
TEFLQDKPLFQDIVTEFIQFVEGSELIIHNAPFDVGFLNSELKHVKWNKTLEDYCRILDT
HHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHCCCCCCHHHHHHHHHH
LILAREKHPGQRNSLDALCKRYEIDHFNRELHGALLDAEILAYVYLAMTGGQSSLFTEVE
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
SSMSHSKIKTQEIKSLSLKKPVIMKANEEELIQHQSFVEFISKKSGINHWEEV
HHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCHHHCC
>Mature Secondary Structure
MRQVILDTETTGIGPEQGHRVIEIGCIELIDRKLTGKHFHIYLNPQREVDEGAFRVHGIS
CCEEEEECCCCCCCHHHCCEEEEEHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEECCC
TEFLQDKPLFQDIVTEFIQFVEGSELIIHNAPFDVGFLNSELKHVKWNKTLEDYCRILDT
HHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHCCCCCCHHHHHHHHHH
LILAREKHPGQRNSLDALCKRYEIDHFNRELHGALLDAEILAYVYLAMTGGQSSLFTEVE
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
SSMSHSKIKTQEIKSLSLKKPVIMKANEEELIQHQSFVEFISKKSGINHWEEV
HHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]