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The map label for this gene is rdgC [H]

Identifier: 148358773

GI number: 148358773

Start: 1436935

End: 1437873

Strand: Reverse

Name: rdgC [H]

Synonym: LPC_0654

Alternate gene names: 148358773

Gene position: 1437873-1436935 (Counterclockwise)

Preceding gene: 148358774

Following gene: 148358763

Centisome position: 40.2

GC content: 39.3

Gene sequence:

>939_bases
ATGTGGTTCAATAATGCACTGATGTTTCAATACAAACTAGACGGTGGATGTGATTTAAACCGTTCTTTGACTGAAGAAGC
GCTTAAGCCCTGCCCCCCCCATGCTCGCTTTACTTATGGCTGGGTTCCTGCGTTTGAGCAGGAAATGGTGCATGAAGTAG
CTGGTAGCACGCTTATTTGCCTGGGTAAAGAAGAGCGAATCCTTCCTAGAGGAGTCATTAATAAAATGCTCAAGGAAAAA
ATTCAGCAAATAGAAGCAGCCCAGGGTCGACCGGTAAAACGCGCAGAAAAGGCTCAAATGGCTGAGGATCTTGAATTTGA
ACTATTGCCTAAATCCTTCTGTGTTCAAAAAAAACTTTTAGCGATTCTTGATAGTGTAAGTCAGAGATTAATTATTAATA
CTTCAAGCAACAATCAGGCGTCTCAGTTGACTTCTTTTTTGCGTAAATCAATCCCTGGTATTGTGATAGAACCATTAAAC
CTTACCGAAAATCTTGCCTTGCGATTCGCAGAATGGATCCATTCTCCAGCAACTCTACCTGATGACTTTCAATTAGCCTC
CGATTGTTTACTCTTTTCTCTTGAAGATGAAAAAAAAAGAGTCCATTGCAAAGGCTATGAATTACCTGCCGAAGAAATCC
TGACTCTATTGGCTCAAGGTATGGGGACTGCAGAAATCTCATTAATTTGGAAAGAGCGGATTCAGTTCACCTTGACGCAG
GATTTTACTTTTAAAAAACTGAAAAGCCTTGATTATCTGATCGACGATTTTAATGAGATCAGACAATTGGAAGAAGAGTA
TCAAAGACAAGATGCCGCGTTGACCTTATTAAGTGGCGAGTTAAGAGAACTTATTAACGGATTAATGAAGATATTTGTTA
ATCATGCAGAAATGAAATCGGCTCAAATTGAAAAAATTGCAGAAGATTGCACAATATAA

Upstream 100 bases:

>100_bases
TTGGCAGTTTGCTCTCTTGCGTCGAAATGGCAACAGCCCCTAATCATCGCAGTAAAATGCTATCCGTGATAACATCGCAA
ATTTATTTTAAGGACTAATT

Downstream 100 bases:

>100_bases
AGTCGTATCATTTTAACCCGTAACCTATCGAGGGAACTCCTTTGCTAACAGAGCTCCCTCTCATCTTGATTCAAGAGAAA
ACGAGTGCATTACACATCAC

Product: recombination associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MWFNNALMFQYKLDGGCDLNRSLTEEALKPCPPHARFTYGWVPAFEQEMVHEVAGSTLICLGKEERILPRGVINKMLKEK
IQQIEAAQGRPVKRAEKAQMAEDLEFELLPKSFCVQKKLLAILDSVSQRLIINTSSNNQASQLTSFLRKSIPGIVIEPLN
LTENLALRFAEWIHSPATLPDDFQLASDCLLFSLEDEKKRVHCKGYELPAEEILTLLAQGMGTAEISLIWKERIQFTLTQ
DFTFKKLKSLDYLIDDFNEIRQLEEEYQRQDAALTLLSGELRELINGLMKIFVNHAEMKSAQIEKIAEDCTI

Sequences:

>Translated_312_residues
MWFNNALMFQYKLDGGCDLNRSLTEEALKPCPPHARFTYGWVPAFEQEMVHEVAGSTLICLGKEERILPRGVINKMLKEK
IQQIEAAQGRPVKRAEKAQMAEDLEFELLPKSFCVQKKLLAILDSVSQRLIINTSSNNQASQLTSFLRKSIPGIVIEPLN
LTENLALRFAEWIHSPATLPDDFQLASDCLLFSLEDEKKRVHCKGYELPAEEILTLLAQGMGTAEISLIWKERIQFTLTQ
DFTFKKLKSLDYLIDDFNEIRQLEEEYQRQDAALTLLSGELRELINGLMKIFVNHAEMKSAQIEKIAEDCTI
>Mature_312_residues
MWFNNALMFQYKLDGGCDLNRSLTEEALKPCPPHARFTYGWVPAFEQEMVHEVAGSTLICLGKEERILPRGVINKMLKEK
IQQIEAAQGRPVKRAEKAQMAEDLEFELLPKSFCVQKKLLAILDSVSQRLIINTSSNNQASQLTSFLRKSIPGIVIEPLN
LTENLALRFAEWIHSPATLPDDFQLASDCLLFSLEDEKKRVHCKGYELPAEEILTLLAQGMGTAEISLIWKERIQFTLTQ
DFTFKKLKSLDYLIDDFNEIRQLEEEYQRQDAALTLLSGELRELINGLMKIFVNHAEMKSAQIEKIAEDCTI

Specific function: May be involved in recombination [H]

COG id: COG2974

COG function: function code L; DNA recombination-dependent growth factor C

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdgC family [H]

Homologues:

Organism=Escherichia coli, GI1786592, Length=303, Percent_Identity=29.7029702970297, Blast_Score=147, Evalue=7e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007476 [H]

Pfam domain/function: PF04381 RdgC [H]

EC number: NA

Molecular weight: Translated: 35638; Mature: 35638

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWFNNALMFQYKLDGGCDLNRSLTEEALKPCPPHARFTYGWVPAFEQEMVHEVAGSTLIC
CCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHCCCEEEE
LGKEERILPRGVINKMLKEKIQQIEAAQGRPVKRAEKAQMAEDLEFELLPKSFCVQKKLL
ECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHCCCHHHHHHHHHH
AILDSVSQRLIINTSSNNQASQLTSFLRKSIPGIVIEPLNLTENLALRFAEWIHSPATLP
HHHHHHCCEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCCC
DDFQLASDCLLFSLEDEKKRVHCKGYELPAEEILTLLAQGMGTAEISLIWKERIQFTLTQ
CHHHHHHHHHEEEECCCCCEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHEEEEC
DFTFKKLKSLDYLIDDFNEIRQLEEEYQRQDAALTLLSGELRELINGLMKIFVNHAEMKS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQIEKIAEDCTI
HHHHHHHHHCCC
>Mature Secondary Structure
MWFNNALMFQYKLDGGCDLNRSLTEEALKPCPPHARFTYGWVPAFEQEMVHEVAGSTLIC
CCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHCCCEEEE
LGKEERILPRGVINKMLKEKIQQIEAAQGRPVKRAEKAQMAEDLEFELLPKSFCVQKKLL
ECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHCCCHHHHHHHHHH
AILDSVSQRLIINTSSNNQASQLTSFLRKSIPGIVIEPLNLTENLALRFAEWIHSPATLP
HHHHHHCCEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCCC
DDFQLASDCLLFSLEDEKKRVHCKGYELPAEEILTLLAQGMGTAEISLIWKERIQFTLTQ
CHHHHHHHHHEEEECCCCCEEEECCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHEEEEC
DFTFKKLKSLDYLIDDFNEIRQLEEEYQRQDAALTLLSGELRELINGLMKIFVNHAEMKS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQIEKIAEDCTI
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA