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The map label for this gene is opsX [H]

Identifier: 148358569

GI number: 148358569

Start: 3223855

End: 3224841

Strand: Reverse

Name: opsX [H]

Synonym: LPC_0441

Alternate gene names: 148358569

Gene position: 3224841-3223855 (Counterclockwise)

Preceding gene: 148358568

Following gene: 148358570

Centisome position: 90.17

GC content: 41.24

Gene sequence:

>987_bases
ATGTTGGTCCCACTGATAAGGACCTTGCAAAATAAATTGCCTAATGCTCAATTGACCTGGATTATTTCAAAACCTGCCTT
TTATTTGGTGGAAGGAATGGAAGGCGTGGAGTTTATTGTTATTGATAAACCTAAAACGCTTGCTGACTATTGGCGGTTTA
GGAAACAAATGTTGCATCGCCAGTTTGATGTGTTGTTAGCGCCTCAAGCCAGTTTTAGAACTAATTGGCTTATTCCATTT
ATTAAAGCTAAACGCAAAGTTGGCTATGATTCTCACAGAGCGAATGATGGCCACCGTCTGTTTATAAAGGAAAGCATTAC
TCCTGGATTGGAACACACACTTGAGGGCTTTTTAAAATTTGCTGAGCCTTTAGGTGTCACTGAAAAAATAATCCACTGGG
ATTTACCGATTACCAAGGCAGATTATGAATGGGCTCAAAATCATTTGCCGGAACAAGAAAGGCCAATTTTAGTTGTTAAT
CCCGCAGCCAGTAAACCTGAGCGCAGTTGGTTAGCTGAGCGATACATTGAGGTTCTGAAACAGGCGCAAGTTAAATGGGA
TGTCAAGGTTGTTTTAACTGGAGGCCCTGGTGATCATGATAAATCATTGGCAGAGGAAATAGCGAAAGAAATTCCAGTGG
TTAATTTGGTTGGAAAGACCAAACCTAAGCAATTGTTGGCTGTGATCAGTAAAGCAAAAGCAGTCTTGTGTCCTGATACA
GGTCCTTCTCATATGGCGGCAGCAGTAGGCACGCCTGTTGTGGCTTTGCATGCTGTTACCAACCCCTGTATTTCTGGCCC
GTACACTTTTCAACATTTGGTAGTTAACAGGTACTCGCAAGCTATCCAAACTGTATTGGGAGTGAGTCCAGAGAAGAGTG
TTTGGGGTACGCAGGTTCATGGATATGAAGCTATGAAATTAATTACCGTAGATGATGTAATGGAAAAATTAACTGAAATA
TTTTCAGGACTTATGAACAATACCTAA

Upstream 100 bases:

>100_bases
ACCGGGGTGGAGGTTTGCCCTTATTGTGGCTCTCGTTTTGTATTGCAGAATGATTAAATCGATTTGTGTTATAAGGCTTT
CAGCTTTAGGGGATGTTTTG

Downstream 100 bases:

>100_bases
TCTTTGTGCGGGAAAGGTTTTTAATAGAGCATTTCGCTTATGCTCATTAAAAGCCGTTTGCCCTTACCCTGGTGATTTCC
CCAAGTACTGATTTTGATTT

Product: heptosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MLVPLIRTLQNKLPNAQLTWIISKPAFYLVEGMEGVEFIVIDKPKTLADYWRFRKQMLHRQFDVLLAPQASFRTNWLIPF
IKAKRKVGYDSHRANDGHRLFIKESITPGLEHTLEGFLKFAEPLGVTEKIIHWDLPITKADYEWAQNHLPEQERPILVVN
PAASKPERSWLAERYIEVLKQAQVKWDVKVVLTGGPGDHDKSLAEEIAKEIPVVNLVGKTKPKQLLAVISKAKAVLCPDT
GPSHMAAAVGTPVVALHAVTNPCISGPYTFQHLVVNRYSQAIQTVLGVSPEKSVWGTQVHGYEAMKLITVDDVMEKLTEI
FSGLMNNT

Sequences:

>Translated_328_residues
MLVPLIRTLQNKLPNAQLTWIISKPAFYLVEGMEGVEFIVIDKPKTLADYWRFRKQMLHRQFDVLLAPQASFRTNWLIPF
IKAKRKVGYDSHRANDGHRLFIKESITPGLEHTLEGFLKFAEPLGVTEKIIHWDLPITKADYEWAQNHLPEQERPILVVN
PAASKPERSWLAERYIEVLKQAQVKWDVKVVLTGGPGDHDKSLAEEIAKEIPVVNLVGKTKPKQLLAVISKAKAVLCPDT
GPSHMAAAVGTPVVALHAVTNPCISGPYTFQHLVVNRYSQAIQTVLGVSPEKSVWGTQVHGYEAMKLITVDDVMEKLTEI
FSGLMNNT
>Mature_328_residues
MLVPLIRTLQNKLPNAQLTWIISKPAFYLVEGMEGVEFIVIDKPKTLADYWRFRKQMLHRQFDVLLAPQASFRTNWLIPF
IKAKRKVGYDSHRANDGHRLFIKESITPGLEHTLEGFLKFAEPLGVTEKIIHWDLPITKADYEWAQNHLPEQERPILVVN
PAASKPERSWLAERYIEVLKQAQVKWDVKVVLTGGPGDHDKSLAEEIAKEIPVVNLVGKTKPKQLLAVISKAKAVLCPDT
GPSHMAAAVGTPVVALHAVTNPCISGPYTFQHLVVNRYSQAIQTVLGVSPEKSVWGTQVHGYEAMKLITVDDVMEKLTEI
FSGLMNNT

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

Organism=Escherichia coli, GI1790062, Length=287, Percent_Identity=24.0418118466899, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 36864; Mature: 36864

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVPLIRTLQNKLPNAQLTWIISKPAFYLVEGMEGVEFIVIDKPKTLADYWRFRKQMLHR
CCCHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHH
QFDVLLAPQASFRTNWLIPFIKAKRKVGYDSHRANDGHRLFIKESITPGLEHTLEGFLKF
HHCEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHH
AEPLGVTEKIIHWDLPITKADYEWAQNHLPEQERPILVVNPAASKPERSWLAERYIEVLK
HHHCCCHHHHEEECCCCCCCCHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHH
QAQVKWDVKVVLTGGPGDHDKSLAEEIAKEIPVVNLVGKTKPKQLLAVISKAKAVLCPDT
HHCCEEEEEEEEECCCCCCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHCCEEECCCC
GPSHMAAAVGTPVVALHAVTNPCISGPYTFQHLVVNRYSQAIQTVLGVSPEKSVWGTQVH
CHHHHHHHHCCCCEEEEHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEC
GYEAMKLITVDDVMEKLTEIFSGLMNNT
CCCEEEEEEHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLVPLIRTLQNKLPNAQLTWIISKPAFYLVEGMEGVEFIVIDKPKTLADYWRFRKQMLHR
CCCHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHH
QFDVLLAPQASFRTNWLIPFIKAKRKVGYDSHRANDGHRLFIKESITPGLEHTLEGFLKF
HHCEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHH
AEPLGVTEKIIHWDLPITKADYEWAQNHLPEQERPILVVNPAASKPERSWLAERYIEVLK
HHHCCCHHHHEEECCCCCCCCHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHH
QAQVKWDVKVVLTGGPGDHDKSLAEEIAKEIPVVNLVGKTKPKQLLAVISKAKAVLCPDT
HHCCEEEEEEEEECCCCCCHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHCCEEECCCC
GPSHMAAAVGTPVVALHAVTNPCISGPYTFQHLVVNRYSQAIQTVLGVSPEKSVWGTQVH
CHHHHHHHHCCCCEEEEHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEC
GYEAMKLITVDDVMEKLTEIFSGLMNNT
CCCEEEEEEHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Transferring other glycosyl groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]