Click here to switch to the map view.

The map label for this gene is yjgR [H]

Identifier: 148358479

GI number: 148358479

Start: 370773

End: 372272

Strand: Direct

Name: yjgR [H]

Synonym: LPC_0345

Alternate gene names: 148358479

Gene position: 370773-372272 (Clockwise)

Preceding gene: 148358478

Following gene: 148358480

Centisome position: 10.37

GC content: 41.07

Gene sequence:

>1500_bases
ATGTATGATGATCTATGGAAGCCTTATGCGTCTGCCGAACTACCTTCTTTAAAATTGGGCGGCATTGTCTTAAATGGTCA
GTTACTCTCTGAAACGCCGATTCACTTAGTGTTAAAGGCTTTCAATCGACATGGTTTAATTGCGGGAGCAACCGGAACAG
GTAAAACAAAAACCATGCAGGTATTAGCTGAGCAATTATCCCTAAATGGAGTGCCCAGTTTAGTGATGGACATCAAGGGG
GATATTTCTGGCCTGGCTATGCCAGGTGAAACTTCTACCAAATTACAGGACAGAGGTCAGCAGCTGCATATTGATTTTAC
TCCCCGAGGTTTCCCGGTAGAGTTATTGACACTGACTCCACAAGACCCCGGTGTTCCATTACGTGCGAGAATTGATGATT
TTGGTCCCCTGCTTTTTTCGCTGATGCTGGATCTGAATGATACTCAGGCAGGAGTTGTGACTGTATTATTTGAGTATGCC
AAGGCGAATCAACTGAATTTGGTTAATTTGGATGATTTTAAATCTTTGCTCCAATTTGCTCAAACGGATAGAGGCAACCA
GCTGATTGCCGCCCAATATGGCGGAGTTGCTTCCACATCCATTGGGACTATTGTCCGTAAAATCATCGAGCTCGAGTCTC
AGGGTGGGAAACAGTTTTTTGGTGAACCTTCCTTTGTCATTCAGGATTTGCTGAGAACGGATGCAAATGGTTATGGTGTC
ATTTCCATACTAAGATTATTAAACATGCAGGACAAACCTAAACTATTTTCCAGTTTTATGCTGAAGTTATTGTCTGATGT
TTATCGCCAAATGCCGGAATTAGGTGATCCGGACAAACCACGATTGGTTCTCTTTATCGATGAGGCGCATTTAATTTTTA
ATTATTCCAGCAAAGCATTACTTAATTTAATAGAAACAATAGTTAAGCTAATTCGATCCAAAGGAATCGGGTTGATATTT
TGCACTCAAACGCCTAACGATATCCCTGAGGCTGTTTTAAGCCAATTGGGGTTAAAAATCCAACACTCATTACGTGCTTT
TACTGCAAAAGATCGAAAAGCCTTAAAGTTGGTATCGCAGAATTTTCCAGTATCCAGTTACTATAATACTGAGCAACTAC
TCACTACTTTAAGTATAGGGGAAGCTTTAGTGAGTGCCTTGGATGCCAAGGGTCAACCGACACCTTTAGTTCATGCGATG
ATTAGAGCACCTGAATCACGTATGGGGCCTTTAAGCAATGAGGAGTTAAAGGTTTTACTGGATCAATCGTTCCTTTTTGG
CAAATATTCTCAAATAATAGACACGCCTTCTGCGAAAGAGAAATTGGCTGAGCTAATCTCTGAGCAACAAGTTGCAAAAC
AACAGACCAGTCAGAAAGAAAACAATTCCTCGGTGTTGAATAGTTTAAGTAAAAATACCTTATTCCGACAAGTGGTACGT
CAAGTTTTTAGGGAACTCACCAGAGCGATTTTGTCTTTGTTCAAGAGTAAACGGAACTAG

Upstream 100 bases:

>100_bases
GATGTCCTGTTAAAGAGCTCTTAAGACAGATTAAAAGTTGGTGAATCAAAACGAATCCTCTATACTTTTAAAAACTCTTA
TTATCAAGAAGATAAGCATT

Downstream 100 bases:

>100_bases
GCCAGTTGTTGTCCATATTAAATTTTTAACTTATACCGTGCATGGTCAAAATAAAAGCAATATAATCGACAAGGATATAC
ATGATAAACATCACAGGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 499; Mature: 499

Protein sequence:

>499_residues
MYDDLWKPYASAELPSLKLGGIVLNGQLLSETPIHLVLKAFNRHGLIAGATGTGKTKTMQVLAEQLSLNGVPSLVMDIKG
DISGLAMPGETSTKLQDRGQQLHIDFTPRGFPVELLTLTPQDPGVPLRARIDDFGPLLFSLMLDLNDTQAGVVTVLFEYA
KANQLNLVNLDDFKSLLQFAQTDRGNQLIAAQYGGVASTSIGTIVRKIIELESQGGKQFFGEPSFVIQDLLRTDANGYGV
ISILRLLNMQDKPKLFSSFMLKLLSDVYRQMPELGDPDKPRLVLFIDEAHLIFNYSSKALLNLIETIVKLIRSKGIGLIF
CTQTPNDIPEAVLSQLGLKIQHSLRAFTAKDRKALKLVSQNFPVSSYYNTEQLLTTLSIGEALVSALDAKGQPTPLVHAM
IRAPESRMGPLSNEELKVLLDQSFLFGKYSQIIDTPSAKEKLAELISEQQVAKQQTSQKENNSSVLNSLSKNTLFRQVVR
QVFRELTRAILSLFKSKRN

Sequences:

>Translated_499_residues
MYDDLWKPYASAELPSLKLGGIVLNGQLLSETPIHLVLKAFNRHGLIAGATGTGKTKTMQVLAEQLSLNGVPSLVMDIKG
DISGLAMPGETSTKLQDRGQQLHIDFTPRGFPVELLTLTPQDPGVPLRARIDDFGPLLFSLMLDLNDTQAGVVTVLFEYA
KANQLNLVNLDDFKSLLQFAQTDRGNQLIAAQYGGVASTSIGTIVRKIIELESQGGKQFFGEPSFVIQDLLRTDANGYGV
ISILRLLNMQDKPKLFSSFMLKLLSDVYRQMPELGDPDKPRLVLFIDEAHLIFNYSSKALLNLIETIVKLIRSKGIGLIF
CTQTPNDIPEAVLSQLGLKIQHSLRAFTAKDRKALKLVSQNFPVSSYYNTEQLLTTLSIGEALVSALDAKGQPTPLVHAM
IRAPESRMGPLSNEELKVLLDQSFLFGKYSQIIDTPSAKEKLAELISEQQVAKQQTSQKENNSSVLNSLSKNTLFRQVVR
QVFRELTRAILSLFKSKRN
>Mature_499_residues
MYDDLWKPYASAELPSLKLGGIVLNGQLLSETPIHLVLKAFNRHGLIAGATGTGKTKTMQVLAEQLSLNGVPSLVMDIKG
DISGLAMPGETSTKLQDRGQQLHIDFTPRGFPVELLTLTPQDPGVPLRARIDDFGPLLFSLMLDLNDTQAGVVTVLFEYA
KANQLNLVNLDDFKSLLQFAQTDRGNQLIAAQYGGVASTSIGTIVRKIIELESQGGKQFFGEPSFVIQDLLRTDANGYGV
ISILRLLNMQDKPKLFSSFMLKLLSDVYRQMPELGDPDKPRLVLFIDEAHLIFNYSSKALLNLIETIVKLIRSKGIGLIF
CTQTPNDIPEAVLSQLGLKIQHSLRAFTAKDRKALKLVSQNFPVSSYYNTEQLLTTLSIGEALVSALDAKGQPTPLVHAM
IRAPESRMGPLSNEELKVLLDQSFLFGKYSQIIDTPSAKEKLAELISEQQVAKQQTSQKENNSSVLNSLSKNTLFRQVVR
QVFRELTRAILSLFKSKRN

Specific function: Unknown

COG id: COG0433

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yjiB [H]

Homologues:

Organism=Escherichia coli, GI1790714, Length=439, Percent_Identity=43.7357630979499, Blast_Score=345, Evalue=3e-96,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008571 [H]

Pfam domain/function: PF05872 DUF853 [H]

EC number: NA

Molecular weight: Translated: 55142; Mature: 55142

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYDDLWKPYASAELPSLKLGGIVLNGQLLSETPIHLVLKAFNRHGLIAGATGTGKTKTMQ
CCCCCCCCCCCCCCCCEEECCEEEECEECCCCHHHHHHHHHCCCCEEEECCCCCCHHHHH
VLAEQLSLNGVPSLVMDIKGDISGLAMPGETSTKLQDRGQQLHIDFTPRGFPVELLTLTP
HHHHHHCCCCCCHHHHHHCCCCCCEECCCCCCHHHHCCCCEEEEEECCCCCCEEEEEECC
QDPGVPLRARIDDFGPLLFSLMLDLNDTQAGVVTVLFEYAKANQLNLVNLDDFKSLLQFA
CCCCCCCEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHH
QTDRGNQLIAAQYGGVASTSIGTIVRKIIELESQGGKQFFGEPSFVIQDLLRTDANGYGV
HCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHH
ISILRLLNMQDKPKLFSSFMLKLLSDVYRQMPELGDPDKPRLVLFIDEAHLIFNYSSKAL
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEEEECCHHHH
LNLIETIVKLIRSKGIGLIFCTQTPNDIPEAVLSQLGLKIQHSLRAFTAKDRKALKLVSQ
HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC
NFPVSSYYNTEQLLTTLSIGEALVSALDAKGQPTPLVHAMIRAPESRMGPLSNEELKVLL
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHCCCCCCCHHHHHH
DQSFLFGKYSQIIDTPSAKEKLAELISEQQVAKQQTSQKENNSSVLNSLSKNTLFRQVVR
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
QVFRELTRAILSLFKSKRN
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYDDLWKPYASAELPSLKLGGIVLNGQLLSETPIHLVLKAFNRHGLIAGATGTGKTKTMQ
CCCCCCCCCCCCCCCCEEECCEEEECEECCCCHHHHHHHHHCCCCEEEECCCCCCHHHHH
VLAEQLSLNGVPSLVMDIKGDISGLAMPGETSTKLQDRGQQLHIDFTPRGFPVELLTLTP
HHHHHHCCCCCCHHHHHHCCCCCCEECCCCCCHHHHCCCCEEEEEECCCCCCEEEEEECC
QDPGVPLRARIDDFGPLLFSLMLDLNDTQAGVVTVLFEYAKANQLNLVNLDDFKSLLQFA
CCCCCCCEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHH
QTDRGNQLIAAQYGGVASTSIGTIVRKIIELESQGGKQFFGEPSFVIQDLLRTDANGYGV
HCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHH
ISILRLLNMQDKPKLFSSFMLKLLSDVYRQMPELGDPDKPRLVLFIDEAHLIFNYSSKAL
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEEEECCHHHH
LNLIETIVKLIRSKGIGLIFCTQTPNDIPEAVLSQLGLKIQHSLRAFTAKDRKALKLVSQ
HHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC
NFPVSSYYNTEQLLTTLSIGEALVSALDAKGQPTPLVHAMIRAPESRMGPLSNEELKVLL
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHCCCCCCCHHHHHH
DQSFLFGKYSQIIDTPSAKEKLAELISEQQVAKQQTSQKENNSSVLNSLSKNTLFRQVVR
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
QVFRELTRAILSLFKSKRN
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]