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The map label for this gene is trbJ

Identifier: 148358316

GI number: 148358316

Start: 193281

End: 194021

Strand: Direct

Name: trbJ

Synonym: LPC_0178

Alternate gene names: NA

Gene position: 193281-194021 (Clockwise)

Preceding gene: 148358315

Following gene: 148358317

Centisome position: 5.4

GC content: 41.97

Gene sequence:

>741_bases
ATGAAACTCAGACTCATGCTTATTTTTTTATGGAGTGCGAACGCTTTTTCAAATGGTGCGCCGGTGTTTGACTTTGCAAA
CTGGCTTGAAAATGGAAAAATCATAGTGAATCAGGTGCACCAGTACAAAACTCAGATTGATCAATATAACAATCAACTTC
AGCAATACCAAAACATGCTGGATAACACCAAATCGCTCACTTCGTTTCAATGGGATAATGCCAATGGTGTTATTAATAAT
CTGCTTGATGCAACCAATACGATTGATTATTACAAGCAGGAAGCGGGTAGCCTGCAGGGTTATCTCGATCGTTTTCAAAC
CGAAGAATACTATCAAAAATCACCCTGTTTTAATGGCGATAGAAGATGCACGCCAGCGGAAATGAGAAAAATAAATCAAA
ATAAAATGGCCGCATCTGTTGCCCAAAAGCGTGCAAATGACGCGATGCTCAAAGGCATTGATAAGCAACAGCAGAATTTA
AAAAGCGATTCAGAAAAACTGCGCATGTTGCAAACCCAGGCGCAAGGTGCCCAAGGCCAAAAACAAGCACTTCAAGCCGC
CTCCCAACTCGCCAGCAATCAATCCCATCAATTACTGCAAATCAGAGGATTGTTACTGGCCCAACAAAACGCTCAAGCAA
CAAAAGATGCTGCAGCTTTGAATAAAGAAGCCATCCAAACGGCCGGTGATGAACGTTTTCGCTCAGGAACGTACCATAAA
AGTTCCGGTAAAAAGTGGTAA

Upstream 100 bases:

>100_bases
ATAAACATTCGGCCTGGTTACCGTTTCAATATTATTGTCATTAAAGATTTAACTTTTAAAAGCCCTTATCGGCAATTTGC
TTATTAATACGGGGAAGATA

Downstream 100 bases:

>100_bases
TGCATTTCATAACAACTAGGAGAAGAACCATGAAAATCTTAAGTTTGTCTATCGCGCTTTTGGCTTGTTTGCTTTCAGGT
TGTGATAACCCTGAAACCAA

Product: conjugal transfer protein TrbJ

Products: NA

Alternate protein names: TrbJ Protein Of DNA Transfer System; Conjugative Transfer Protein TrbJ; Conjugal Transfer Protein; TrbJ Protein; Mating Pair Formation Protein

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MKLRLMLIFLWSANAFSNGAPVFDFANWLENGKIIVNQVHQYKTQIDQYNNQLQQYQNMLDNTKSLTSFQWDNANGVINN
LLDATNTIDYYKQEAGSLQGYLDRFQTEEYYQKSPCFNGDRRCTPAEMRKINQNKMAASVAQKRANDAMLKGIDKQQQNL
KSDSEKLRMLQTQAQGAQGQKQALQAASQLASNQSHQLLQIRGLLLAQQNAQATKDAAALNKEAIQTAGDERFRSGTYHK
SSGKKW

Sequences:

>Translated_246_residues
MKLRLMLIFLWSANAFSNGAPVFDFANWLENGKIIVNQVHQYKTQIDQYNNQLQQYQNMLDNTKSLTSFQWDNANGVINN
LLDATNTIDYYKQEAGSLQGYLDRFQTEEYYQKSPCFNGDRRCTPAEMRKINQNKMAASVAQKRANDAMLKGIDKQQQNL
KSDSEKLRMLQTQAQGAQGQKQALQAASQLASNQSHQLLQIRGLLLAQQNAQATKDAAALNKEAIQTAGDERFRSGTYHK
SSGKKW
>Mature_246_residues
MKLRLMLIFLWSANAFSNGAPVFDFANWLENGKIIVNQVHQYKTQIDQYNNQLQQYQNMLDNTKSLTSFQWDNANGVINN
LLDATNTIDYYKQEAGSLQGYLDRFQTEEYYQKSPCFNGDRRCTPAEMRKINQNKMAASVAQKRANDAMLKGIDKQQQNL
KSDSEKLRMLQTQAQGAQGQKQALQAASQLASNQSHQLLQIRGLLLAQQNAQATKDAAALNKEAIQTAGDERFRSGTYHK
SSGKKW

Specific function: Unknown

COG id: COG5314

COG function: function code U; Conjugal transfer/entry exclusion protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27924; Mature: 27924

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLRLMLIFLWSANAFSNGAPVFDFANWLENGKIIVNQVHQYKTQIDQYNNQLQQYQNML
CCEEEEEEEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DNTKSLTSFQWDNANGVINNLLDATNTIDYYKQEAGSLQGYLDRFQTEEYYQKSPCFNGD
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
RRCTPAEMRKINQNKMAASVAQKRANDAMLKGIDKQQQNLKSDSEKLRMLQTQAQGAQGQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCH
KQALQAASQLASNQSHQLLQIRGLLLAQQNAQATKDAAALNKEAIQTAGDERFRSGTYHK
HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCC
SSGKKW
CCCCCC
>Mature Secondary Structure
MKLRLMLIFLWSANAFSNGAPVFDFANWLENGKIIVNQVHQYKTQIDQYNNQLQQYQNML
CCEEEEEEEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DNTKSLTSFQWDNANGVINNLLDATNTIDYYKQEAGSLQGYLDRFQTEEYYQKSPCFNGD
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
RRCTPAEMRKINQNKMAASVAQKRANDAMLKGIDKQQQNLKSDSEKLRMLQTQAQGAQGQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCH
KQALQAASQLASNQSHQLLQIRGLLLAQQNAQATKDAAALNKEAIQTAGDERFRSGTYHK
HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCC
SSGKKW
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA