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The map label for this gene is ydeN [H]

Identifier: 148358221

GI number: 148358221

Start: 80373

End: 80963

Strand: Direct

Name: ydeN [H]

Synonym: LPC_0082

Alternate gene names: 148358221

Gene position: 80373-80963 (Clockwise)

Preceding gene: 148358220

Following gene: 148358222

Centisome position: 2.25

GC content: 34.69

Gene sequence:

>591_bases
ATGTCTCAATCTAATGTTATTATTGTTCATGGTGCCTATGGTCATCCTTTTGAAAATTGGTTCAATTGGATGAAGACTGA
ATTAGAGAGTTTAGGTATTGAGTGTTTTGTTCCACAACTGCCTACGCCAGATGGCCAGGAATTAAAGAACTGGCTTCACG
TATTTAATTCTACAGTATCACCAATGATTACTCATGATACGATTTTAATCGGCCATAGCCTGGGATCGGCATTTTTATTG
AGGTGGCTTGAGCAAGCTAATCAGTCTGTATTTAGCACTATTTTAGCAGGTCCGTTTATAGGAGCTGTTGGCATACAGAA
ATTTGATAAAATTAATGAAAGTTTTTTTGAAAATGGGTTTGATTGGCATTCAATAATCAATAAATCCAAACAGTTTTTTT
GCTACCATGGGAGCAACGATCCTTACATATCAAGAAGTAACTTTAATTTTATTGCAAATAATCTACAGGCTAGAAAAATT
ATCATCTCTCAAGGCGGGCATCTCAACGAAGCAGCGGGTTTTTCGTCATTTCCCCAGTTACTTATTCAATTAAAATTATT
ATTAGGTATTAATTATGGCAAATTTATTTAG

Upstream 100 bases:

>100_bases
ATGTCATCGCTAAAAGTGATGATTATAATAAGCTCTCTAAAATGCTTCATGATATTGATTCAGACATTCATTTTAACTGA
TAAAAATAAAGGAGAATCGA

Downstream 100 bases:

>100_bases
TTTTTTGTTTCTTGGAACACTGGGCTGGGGCATTTCACTCTATTTAATGAAAATATTATTGGTGTCTTTAACGCCAACGG
AAATTGTTTTGTATCGAATG

Product: YdeN-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MSQSNVIIVHGAYGHPFENWFNWMKTELESLGIECFVPQLPTPDGQELKNWLHVFNSTVSPMITHDTILIGHSLGSAFLL
RWLEQANQSVFSTILAGPFIGAVGIQKFDKINESFFENGFDWHSIINKSKQFFCYHGSNDPYISRSNFNFIANNLQARKI
IISQGGHLNEAAGFSSFPQLLIQLKLLLGINYGKFI

Sequences:

>Translated_196_residues
MSQSNVIIVHGAYGHPFENWFNWMKTELESLGIECFVPQLPTPDGQELKNWLHVFNSTVSPMITHDTILIGHSLGSAFLL
RWLEQANQSVFSTILAGPFIGAVGIQKFDKINESFFENGFDWHSIINKSKQFFCYHGSNDPYISRSNFNFIANNLQARKI
IISQGGHLNEAAGFSSFPQLLIQLKLLLGINYGKFI
>Mature_195_residues
SQSNVIIVHGAYGHPFENWFNWMKTELESLGIECFVPQLPTPDGQELKNWLHVFNSTVSPMITHDTILIGHSLGSAFLLR
WLEQANQSVFSTILAGPFIGAVGIQKFDKINESFFENGFDWHSIINKSKQFFCYHGSNDPYISRSNFNFIANNLQARKII
ISQGGHLNEAAGFSSFPQLLIQLKLLLGINYGKFI

Specific function: Unknown

COG id: COG3545

COG function: function code R; Predicted esterase of the alpha/beta hydrolase fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RBBP9 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010662 [H]

Pfam domain/function: PF06821 DUF1234 [H]

EC number: NA

Molecular weight: Translated: 22154; Mature: 22022

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSNVIIVHGAYGHPFENWFNWMKTELESLGIECFVPQLPTPDGQELKNWLHVFNSTVS
CCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHCCCC
PMITHDTILIGHSLGSAFLLRWLEQANQSVFSTILAGPFIGAVGIQKFDKINESFFENGF
CEEECCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DWHSIINKSKQFFCYHGSNDPYISRSNFNFIANNLQARKIIISQGGHLNEAAGFSSFPQL
CHHHHHCCCCEEEEEECCCCCEEECCCCHHHHCCHHHEEEEEECCCCCCHHCCCCHHHHH
LIQLKLLLGINYGKFI
HHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SQSNVIIVHGAYGHPFENWFNWMKTELESLGIECFVPQLPTPDGQELKNWLHVFNSTVS
CCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHCCCC
PMITHDTILIGHSLGSAFLLRWLEQANQSVFSTILAGPFIGAVGIQKFDKINESFFENGF
CEEECCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DWHSIINKSKQFFCYHGSNDPYISRSNFNFIANNLQARKIIISQGGHLNEAAGFSSFPQL
CHHHHHCCCCEEEEEECCCCCEEECCCCHHHHCCHHHEEEEEECCCCCCHHCCCCHHHHH
LIQLKLLLGINYGKFI
HHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]