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The map label for this gene is 148358220

Identifier: 148358220

GI number: 148358220

Start: 79048

End: 80352

Strand: Direct

Name: 148358220

Synonym: LPC_0081

Alternate gene names: NA

Gene position: 79048-80352 (Clockwise)

Preceding gene: 148358219

Following gene: 148358221

Centisome position: 2.21

GC content: 35.71

Gene sequence:

>1305_bases
ATGAGCATTCATTTAATTAACTACACGACACAACCAGAATTCATTAAATTAATCGTACAAGAATATAAAAATTTTGACTT
GACCAAAAAAACAATTCTTTTTATAGAGCCTTATGGCGCTGTTCTTTCATTGCTAAAGAGAGGACTTGAAAAAAAGTATA
ATATTATTGTTTTAACAGCCAACAGTGATTTTAGAGTGGTGCCTGAGGAGTTTTTAAATCAGGCTGCACTGAATATCAAT
ATAGATACTGCAAATAATAACAGTGTATTGGAGCTTGCTGGTACATTACAGCAGCATATGTCTATAGATGCAGCCATTCC
AGGTTTTGAATATTTTGTTCCTATTGCTTCAAGAGTCAGTGCCTTATTGAAAGTACCTGGGATTGATTGTAAACACGTAT
TAAATCTTAGAAGAAAAGACCTCATGCGGACTGCTTTAAATAAAGCAGGTTTGAATAGTCCACGGTATTACTTAGTAACC
TCTTTGGATGATATTAATGAAGCAGTAGATTATATTGGATTTCCGGCTATCTGTAAGCCTATTGATGCTGCAGGAAGCGT
TCACGTTAAAAAGGTTAAAAATAAAAAAGAATTGCTCGAGGCTGCTAACCGGATATTAAATGGCAATGATGTTCTATGGG
GGCATAAATTATCTAGTTCTTTACTATTAGAAGAGTATATCGATGGTAAAGAATACAGTTTGGAAGGAACGGTGCAAGAT
GGCGTTATTGCTCATTTTAGTACTACTGAAAAATTTGTTTCAGATCAATCTGAGTTCATCGAAATAGGGCATATTGTTAA
TGCACCCATTGAACAGCAGTTGCATACAAAGATTCAAAACTATATTGATCAGGTTATAAAAATCCTTGGCGCTGACAATT
GTCCATTTCATGCCGAAGTGCGATTGCGACGTGATGGGGAACCAGTGCTTATGGAAATTGCAGCCCGCTTAGCAGGTGAT
AAGATTGGCGATTTGCTTTGTTTATCCCGTGGTATTAATTATTTTGATTATGTTTATGCGGCCTATCTGGGTATAAAGAT
GCCCTTAGTAGAAATGAAAAATAATTATGCAGGTATTCGTTTTTTTTATCGTCCACATACAGATATGTTTGCAATAGTAA
CAGGTATGGATGCTGCGAAGATGCAGGCTATTGAAGATATTGCCATTTACTATAATGCTCATGTAGCAATTCCTGAGTTT
CCTAAACCCTTACGTCGCTTGGGGCATGTCATCGCTAAAAGTGATGATTATAATAAGCTCTCTAAAATGCTTCATGATAT
TGATTCAGACATTCATTTTAACTGA

Upstream 100 bases:

>100_bases
TATTTCCATATTGAGGAAGTATTTTATCCACATGAGTATGAGTATTGTCAGTTTGAACCAGTTTATGTATTGCGTAAAAA
ATAGCATAAGGAACTTGCAC

Downstream 100 bases:

>100_bases
TAAAAATAAAGGAGAATCGAATGTCTCAATCTAATGTTATTATTGTTCATGGTGCCTATGGTCATCCTTTTGAAAATTGG
TTCAATTGGATGAAGACTGA

Product: phosphoribosylglycinamide synthetase ATP-grasp (A) domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 433

Protein sequence:

>434_residues
MSIHLINYTTQPEFIKLIVQEYKNFDLTKKTILFIEPYGAVLSLLKRGLEKKYNIIVLTANSDFRVVPEEFLNQAALNIN
IDTANNNSVLELAGTLQQHMSIDAAIPGFEYFVPIASRVSALLKVPGIDCKHVLNLRRKDLMRTALNKAGLNSPRYYLVT
SLDDINEAVDYIGFPAICKPIDAAGSVHVKKVKNKKELLEAANRILNGNDVLWGHKLSSSLLLEEYIDGKEYSLEGTVQD
GVIAHFSTTEKFVSDQSEFIEIGHIVNAPIEQQLHTKIQNYIDQVIKILGADNCPFHAEVRLRRDGEPVLMEIAARLAGD
KIGDLLCLSRGINYFDYVYAAYLGIKMPLVEMKNNYAGIRFFYRPHTDMFAIVTGMDAAKMQAIEDIAIYYNAHVAIPEF
PKPLRRLGHVIAKSDDYNKLSKMLHDIDSDIHFN

Sequences:

>Translated_434_residues
MSIHLINYTTQPEFIKLIVQEYKNFDLTKKTILFIEPYGAVLSLLKRGLEKKYNIIVLTANSDFRVVPEEFLNQAALNIN
IDTANNNSVLELAGTLQQHMSIDAAIPGFEYFVPIASRVSALLKVPGIDCKHVLNLRRKDLMRTALNKAGLNSPRYYLVT
SLDDINEAVDYIGFPAICKPIDAAGSVHVKKVKNKKELLEAANRILNGNDVLWGHKLSSSLLLEEYIDGKEYSLEGTVQD
GVIAHFSTTEKFVSDQSEFIEIGHIVNAPIEQQLHTKIQNYIDQVIKILGADNCPFHAEVRLRRDGEPVLMEIAARLAGD
KIGDLLCLSRGINYFDYVYAAYLGIKMPLVEMKNNYAGIRFFYRPHTDMFAIVTGMDAAKMQAIEDIAIYYNAHVAIPEF
PKPLRRLGHVIAKSDDYNKLSKMLHDIDSDIHFN
>Mature_433_residues
SIHLINYTTQPEFIKLIVQEYKNFDLTKKTILFIEPYGAVLSLLKRGLEKKYNIIVLTANSDFRVVPEEFLNQAALNINI
DTANNNSVLELAGTLQQHMSIDAAIPGFEYFVPIASRVSALLKVPGIDCKHVLNLRRKDLMRTALNKAGLNSPRYYLVTS
LDDINEAVDYIGFPAICKPIDAAGSVHVKKVKNKKELLEAANRILNGNDVLWGHKLSSSLLLEEYIDGKEYSLEGTVQDG
VIAHFSTTEKFVSDQSEFIEIGHIVNAPIEQQLHTKIQNYIDQVIKILGADNCPFHAEVRLRRDGEPVLMEIAARLAGDK
IGDLLCLSRGINYFDYVYAAYLGIKMPLVEMKNNYAGIRFFYRPHTDMFAIVTGMDAAKMQAIEDIAIYYNAHVAIPEFP
KPLRRLGHVIAKSDDYNKLSKMLHDIDSDIHFN

Specific function: Unknown

COG id: COG0439

COG function: function code I; Biotin carboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-grasp domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011761
- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR005479 [H]

Pfam domain/function: PF02786 CPSase_L_D2 [H]

EC number: NA

Molecular weight: Translated: 48932; Mature: 48801

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIHLINYTTQPEFIKLIVQEYKNFDLTKKTILFIEPYGAVLSLLKRGLEKKYNIIVLTA
CEEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCEEEEEE
NSDFRVVPEEFLNQAALNINIDTANNNSVLELAGTLQQHMSIDAAIPGFEYFVPIASRVS
CCCCEECCHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
ALLKVPGIDCKHVLNLRRKDLMRTALNKAGLNSPRYYLVTSLDDINEAVDYIGFPAICKP
HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHCCCCHHHCC
IDAAGSVHVKKVKNKKELLEAANRILNGNDVLWGHKLSSSLLLEEYIDGKEYSLEGTVQD
CCCCCCEEHHHHCCHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHCCCCCEEECCCCCC
GVIAHFSTTEKFVSDQSEFIEIGHIVNAPIEQQLHTKIQNYIDQVIKILGADNCPFHAEV
CEEEEECHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
RLRRDGEPVLMEIAARLAGDKIGDLLCLSRGINYFDYVYAAYLGIKMPLVEMKNNYAGIR
EEECCCCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHCCCCCEEE
FFYRPHTDMFAIVTGMDAAKMQAIEDIAIYYNAHVAIPEFPKPLRRLGHVIAKSDDYNKL
EEECCCCCEEEEEECCCHHHHHHHHHEEEEEEEEEECCCCCHHHHHHHHHHHCCCCHHHH
SKMLHDIDSDIHFN
HHHHHHCCCCCCCC
>Mature Secondary Structure 
SIHLINYTTQPEFIKLIVQEYKNFDLTKKTILFIEPYGAVLSLLKRGLEKKYNIIVLTA
EEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCEEEEEE
NSDFRVVPEEFLNQAALNINIDTANNNSVLELAGTLQQHMSIDAAIPGFEYFVPIASRVS
CCCCEECCHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
ALLKVPGIDCKHVLNLRRKDLMRTALNKAGLNSPRYYLVTSLDDINEAVDYIGFPAICKP
HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHCCCCHHHCC
IDAAGSVHVKKVKNKKELLEAANRILNGNDVLWGHKLSSSLLLEEYIDGKEYSLEGTVQD
CCCCCCEEHHHHCCHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHCCCCCEEECCCCCC
GVIAHFSTTEKFVSDQSEFIEIGHIVNAPIEQQLHTKIQNYIDQVIKILGADNCPFHAEV
CEEEEECHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
RLRRDGEPVLMEIAARLAGDKIGDLLCLSRGINYFDYVYAAYLGIKMPLVEMKNNYAGIR
EEECCCCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHCCCCCEEE
FFYRPHTDMFAIVTGMDAAKMQAIEDIAIYYNAHVAIPEFPKPLRRLGHVIAKSDDYNKL
EEECCCCCEEEEEECCCHHHHHHHHHEEEEEEEEEECCCCCHHHHHHHHHHHCCCCHHHH
SKMLHDIDSDIHFN
HHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]