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The map label for this gene is yhhW [C]

Identifier: 148358153

GI number: 148358153

Start: 17050

End: 17889

Strand: Direct

Name: yhhW [C]

Synonym: LPC_0014

Alternate gene names: 148358153

Gene position: 17050-17889 (Clockwise)

Preceding gene: 148358150

Following gene: 148358154

Centisome position: 0.48

GC content: 41.19

Gene sequence:

>840_bases
ATGAAAGCAATAGAAGTAGAGCGGTTAATCCAGGGAACATTAATACGAGAAGGTGGAGGAGTTAAATTACGTCGCTATAT
AGGAGCTGATAAAACCAATCACTTTGAACCTATACTGCTTTTTGACTATTTTGACAGTTCAGATCCATTGGATTATCTCG
CCGGGTTTCCGCCTCATCCGCATCGCGGATTTGAAACAATTACCTATCTGATGGAGGGAAGCATTACCCATGAAGACAAT
AAAGGTAACAAAGGAGTAATAAACGCAGGTGGTGTGCAGTGGATGACTGCAGGAAAAGGGATTATTCATTCGGAAATGCC
TTCGTCTTCAACGGGCCGGTTGCATGGTTTGCAGTTGTGGTTAAATTTGCCTGCTGCAGAAAAATGGCGAGAACCTCGTT
ATCAGGAAAAATCATCGGATCAACTACCTATTGAAGTCATGGAATCAGGTGCAACCATCAAAGTAATAGCAGGAAGAATT
GATCAAGGATTGAGTTCACCCATTGTTGAAATTGCGACCCGACCTTTGTTTCTAGACATCAATCTCCCTGCCAATGCAAC
TATTCAACAAACGATTCCTGACGATTATCAAGCTGTCCTTTTTGTCATTGAAGGTGCTGTGAATACAGGAGGACAGCAAA
TTACCGCAGGCACTTTAGCCAGCCTGACAAACGGTGAAAGAATACAAATAGAAGGCAAAGACAAAGAAAATAGAAATCAT
TGTTTACTGATAGCTGCGGCTAAACTTCATGAACCTATTGTTCGCTATGGTCCTTTTGTAATGAATACTCAAGAAGAAAT
TACGCAGGCAATACATGATTTTCGTACAGGACATTTTTAG

Upstream 100 bases:

>100_bases
TAACTGAACGTGCCAATAGTTTAAATAATAGTAATTCAATTAGGAAACCGTACTATTTTGAACTATCTTAATATAAGACA
GTAATTAATGAGTAATTAAG

Downstream 100 bases:

>100_bases
TTGCTTATTGCGTTGATTTTAGCCGGATAATTAAAACTATTCAAAATGATCTTCATATATTATCTTGGTTGCTCAAAGGA
TTATGAGTACAATGTGAATG

Product: pirin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MKAIEVERLIQGTLIREGGGVKLRRYIGADKTNHFEPILLFDYFDSSDPLDYLAGFPPHPHRGFETITYLMEGSITHEDN
KGNKGVINAGGVQWMTAGKGIIHSEMPSSSTGRLHGLQLWLNLPAAEKWREPRYQEKSSDQLPIEVMESGATIKVIAGRI
DQGLSSPIVEIATRPLFLDINLPANATIQQTIPDDYQAVLFVIEGAVNTGGQQITAGTLASLTNGERIQIEGKDKENRNH
CLLIAAAKLHEPIVRYGPFVMNTQEEITQAIHDFRTGHF

Sequences:

>Translated_279_residues
MKAIEVERLIQGTLIREGGGVKLRRYIGADKTNHFEPILLFDYFDSSDPLDYLAGFPPHPHRGFETITYLMEGSITHEDN
KGNKGVINAGGVQWMTAGKGIIHSEMPSSSTGRLHGLQLWLNLPAAEKWREPRYQEKSSDQLPIEVMESGATIKVIAGRI
DQGLSSPIVEIATRPLFLDINLPANATIQQTIPDDYQAVLFVIEGAVNTGGQQITAGTLASLTNGERIQIEGKDKENRNH
CLLIAAAKLHEPIVRYGPFVMNTQEEITQAIHDFRTGHF
>Mature_279_residues
MKAIEVERLIQGTLIREGGGVKLRRYIGADKTNHFEPILLFDYFDSSDPLDYLAGFPPHPHRGFETITYLMEGSITHEDN
KGNKGVINAGGVQWMTAGKGIIHSEMPSSSTGRLHGLQLWLNLPAAEKWREPRYQEKSSDQLPIEVMESGATIKVIAGRI
DQGLSSPIVEIATRPLFLDINLPANATIQQTIPDDYQAVLFVIEGAVNTGGQQITAGTLASLTNGERIQIEGKDKENRNH
CLLIAAAKLHEPIVRYGPFVMNTQEEITQAIHDFRTGHF

Specific function: Unknown

COG id: COG1741

COG function: function code R; Pirin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pirin family [H]

Homologues:

Organism=Homo sapiens, GI66363697, Length=265, Percent_Identity=45.2830188679245, Blast_Score=213, Evalue=2e-55,
Organism=Homo sapiens, GI4505823, Length=265, Percent_Identity=45.2830188679245, Blast_Score=213, Evalue=2e-55,
Organism=Escherichia coli, GI1789847, Length=95, Percent_Identity=43.1578947368421, Blast_Score=78, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR012093
- InterPro:   IPR008778
- InterPro:   IPR003829
- InterPro:   IPR014710 [H]

Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]

EC number: NA

Molecular weight: Translated: 30880; Mature: 30880

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAIEVERLIQGTLIREGGGVKLRRYIGADKTNHFEPILLFDYFDSSDPLDYLAGFPPHP
CCCCHHHHHHHHHEEECCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCHHHHHCCCCCC
HRGFETITYLMEGSITHEDNKGNKGVINAGGVQWMTAGKGIIHSEMPSSSTGRLHGLQLW
CCCHHHHHHHHCCCEEECCCCCCCCEEECCCEEEEECCCCEEECCCCCCCCCCEEEEEEE
LNLPAAEKWREPRYQEKSSDQLPIEVMESGATIKVIAGRIDQGLSSPIVEIATRPLFLDI
EECCCHHHHCCCCCCCCCCCCCCHHHHCCCCEEEEEECHHCCCCCCCHHHHCCCCEEEEE
NLPANATIQQTIPDDYQAVLFVIEGAVNTGGQQITAGTLASLTNGERIQIEGKDKENRNH
ECCCCCEEECCCCCCCEEEEEEEECCCCCCCCEEEHHHHHHCCCCCEEEEECCCCCCCCC
CLLIAAAKLHEPIVRYGPFVMNTQEEITQAIHDFRTGHF
EEEEEEHHHHCCHHHHCCEEECCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKAIEVERLIQGTLIREGGGVKLRRYIGADKTNHFEPILLFDYFDSSDPLDYLAGFPPHP
CCCCHHHHHHHHHEEECCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCHHHHHCCCCCC
HRGFETITYLMEGSITHEDNKGNKGVINAGGVQWMTAGKGIIHSEMPSSSTGRLHGLQLW
CCCHHHHHHHHCCCEEECCCCCCCCEEECCCEEEEECCCCEEECCCCCCCCCCEEEEEEE
LNLPAAEKWREPRYQEKSSDQLPIEVMESGATIKVIAGRIDQGLSSPIVEIATRPLFLDI
EECCCHHHHCCCCCCCCCCCCCCHHHHCCCCEEEEEECHHCCCCCCCHHHHCCCCEEEEE
NLPANATIQQTIPDDYQAVLFVIEGAVNTGGQQITAGTLASLTNGERIQIEGKDKENRNH
ECCCCCEEECCCCCCCEEEEEEEECCCCCCCCEEEHHHHHHCCCCCEEEEECCCCCCCCC
CLLIAAAKLHEPIVRYGPFVMNTQEEITQAIHDFRTGHF
EEEEEEHHHHCCHHHHCCEEECCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]