| Definition | Orientia tsutsugamushi Boryong, complete genome. |
|---|---|
| Accession | NC_009488 |
| Length | 2,127,051 |
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The map label for this gene is nuoH
Identifier: 148285162
GI number: 148285162
Start: 2105251
End: 2106321
Strand: Direct
Name: nuoH
Synonym: OTBS_2160
Alternate gene names: 148285162
Gene position: 2105251-2106321 (Clockwise)
Preceding gene: 148285161
Following gene: 148285163
Centisome position: 98.98
GC content: 31.28
Gene sequence:
>1071_bases ATGACTATCTGTACAGATATAATTGCCAATGGCTATGATTTAAAGACACTAATTTATAATAGTGGAGTTGTTTCAATAAA AGTTATAGCGTTAATTATTTGCTTGTTACTTGCAACAGCATATTTAACATTTGCTGAGAGAAAAGTCATTGCTTATATGC AATTACGTGTTGGGCCTAGTTTGGCTGGCCCATTTGGATTGTTACAGCCAATAGCTGATGCTATAAAATTAGTTTTTAAA GAGCCTATTATACCAGCAAAAGCTGATAGGAAATTGTTTATTATAGCTCCAATTATTACTTTTGTATTATCTTTATTAGG TTGGTCTGTAATTCCAATTGACCATGATATCGTTCTTTCTAGAATTCATATAGGAGGAATATTATTTATATTAGCAGTAA CTTCATTAGGAGTTTATGGAATTATAATTGCTGGCTGGGCAAGTAATTCTAAGTATGCTTTTTTAGGTGCTGTAAGGTCT GCAGCGCAAATGATTTCATATGAATTAGCAATGGCACTAAGTATAGTTGCAGTACTTATTGTGACTGGAGAAATGGATTT GATTCAAATTGTTGAAGCACAAAAAACTAGGCCTATATGGTTAACAATAATGATGCTACCATTAGCAGTTATTTATTTTA TATCAATATTAGCTAAAACTAATAGGCTGCCATTTGATCTTCCAGAGGCTGAATCTGAGCTAGTTGCAGGATATAATGTT GAATATTCTTCTATGGCTTTTGCTATGTTTTTTCTTGGAGAATATGCTAACATGATATTGGGTAGTAGCTTAATGACTAT CATGTTTTTAGGAGGATACTTGCCTCCATTTAATTTAGAGATATTAACTTTCATTCCAGGTTATATATGGTTTATATTAA AAGTATCTATGGTATTATTCTGTTTTTTATGGATACGAGCAACATTGCCACGATATAGATATGATCAATTAATGTATTTG GGATTGAAAGTATTTTTGCCGATTGTATTAGCTTGGATAATAGTAGTATCAACTATTTTAGTATATAGTAATAACTTACC CATAGCACTAGAAACTGTGCTAAACAAATAA
Upstream 100 bases:
>100_bases TATCACCAGTTATGGCAGAATGTACAAAAGTACAAAAAGGATAATATTAGAGTTAAAGTTAAATCTTGTACATTAAATAA AAAATAATAATTATGACTAT
Downstream 100 bases:
>100_bases TTGGATTTAATGTAGAGAATCGAAAATGAAAATAACTAATTTTACTAAATCTTTTCTTTTGTATGAAATTATTGTTGGAA TGTTTTTAACTTTGAAATAT
Product: NADH dehydrogenase I chain H
Products: NA
Alternate protein names: NADH dehydrogenase I subunit H; NDH-1 subunit H
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MTICTDIIANGYDLKTLIYNSGVVSIKVIALIICLLLATAYLTFAERKVIAYMQLRVGPSLAGPFGLLQPIADAIKLVFK EPIIPAKADRKLFIIAPIITFVLSLLGWSVIPIDHDIVLSRIHIGGILFILAVTSLGVYGIIIAGWASNSKYAFLGAVRS AAQMISYELAMALSIVAVLIVTGEMDLIQIVEAQKTRPIWLTIMMLPLAVIYFISILAKTNRLPFDLPEAESELVAGYNV EYSSMAFAMFFLGEYANMILGSSLMTIMFLGGYLPPFNLEILTFIPGYIWFILKVSMVLFCFLWIRATLPRYRYDQLMYL GLKVFLPIVLAWIIVVSTILVYSNNLPIALETVLNK
Sequences:
>Translated_356_residues MTICTDIIANGYDLKTLIYNSGVVSIKVIALIICLLLATAYLTFAERKVIAYMQLRVGPSLAGPFGLLQPIADAIKLVFK EPIIPAKADRKLFIIAPIITFVLSLLGWSVIPIDHDIVLSRIHIGGILFILAVTSLGVYGIIIAGWASNSKYAFLGAVRS AAQMISYELAMALSIVAVLIVTGEMDLIQIVEAQKTRPIWLTIMMLPLAVIYFISILAKTNRLPFDLPEAESELVAGYNV EYSSMAFAMFFLGEYANMILGSSLMTIMFLGGYLPPFNLEILTFIPGYIWFILKVSMVLFCFLWIRATLPRYRYDQLMYL GLKVFLPIVLAWIIVVSTILVYSNNLPIALETVLNK >Mature_355_residues TICTDIIANGYDLKTLIYNSGVVSIKVIALIICLLLATAYLTFAERKVIAYMQLRVGPSLAGPFGLLQPIADAIKLVFKE PIIPAKADRKLFIIAPIITFVLSLLGWSVIPIDHDIVLSRIHIGGILFILAVTSLGVYGIIIAGWASNSKYAFLGAVRSA AQMISYELAMALSIVAVLIVTGEMDLIQIVEAQKTRPIWLTIMMLPLAVIYFISILAKTNRLPFDLPEAESELVAGYNVE YSSMAFAMFFLGEYANMILGSSLMTIMFLGGYLPPFNLEILTFIPGYIWFILKVSMVLFCFLWIRATLPRYRYDQLMYLG LKVFLPIVLAWIIVVSTILVYSNNLPIALETVLNK
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG1005
COG function: function code C; NADH:ubiquinone oxidoreductase subunit 1 (chain H)
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the complex I subunit 1 family
Homologues:
Organism=Homo sapiens, GI251831107, Length=294, Percent_Identity=45.578231292517, Blast_Score=254, Evalue=1e-67, Organism=Escherichia coli, GI1788618, Length=318, Percent_Identity=38.3647798742138, Blast_Score=237, Evalue=8e-64,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NUOH_ORITB (A5CFN5)
Other databases:
- EMBL: AM494475 - RefSeq: YP_001249252.1 - STRING: A5CFN5 - GeneID: 5219202 - GenomeReviews: AM494475_GR - KEGG: ots:OTBS_2160 - eggNOG: COG1005 - HOGENOM: HBG727670 - OMA: FMVEYGS - ProtClustDB: CLSK2325915 - BioCyc: OTSU357244:OTBS_2160-MONOMER - HAMAP: MF_01350 - InterPro: IPR023020 - InterPro: IPR001694 - InterPro: IPR018086 - PANTHER: PTHR11432
Pfam domain/function: PF00146 NADHdh
EC number: =1.6.99.5
Molecular weight: Translated: 39539; Mature: 39408
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: PS00667 COMPLEX1_ND1_1; PS00668 COMPLEX1_ND1_2
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x10043ed0)-; HASH(0xdd6fba0)-; HASH(0xf1cbd6c)-; HASH(0xf5ca730)-; HASH(0xfb7a24c)-; HASH(0xf6456d4)-; HASH(0x1003d564)-; HASH(0x100602a4)-; HASH(0x10072e9c)-;
Cys/Met content:
0.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTICTDIIANGYDLKTLIYNSGVVSIKVIALIICLLLATAYLTFAERKVIAYMQLRVGPS CCCHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LAGPFGLLQPIADAIKLVFKEPIIPAKADRKLFIIAPIITFVLSLLGWSVIPIDHDIVLS CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHCCEEECCCHHHHHH RIHIGGILFILAVTSLGVYGIIIAGWASNSKYAFLGAVRSAAQMISYELAMALSIVAVLI HHHHHHHHHHHHHHHCCHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTGEMDLIQIVEAQKTRPIWLTIMMLPLAVIYFISILAKTNRLPFDLPEAESELVAGYNV HCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCC EYSSMAFAMFFLGEYANMILGSSLMTIMFLGGYLPPFNLEILTFIPGYIWFILKVSMVLF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH CFLWIRATLPRYRYDQLMYLGLKVFLPIVLAWIIVVSTILVYSNNLPIALETVLNK HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCH >Mature Secondary Structure TICTDIIANGYDLKTLIYNSGVVSIKVIALIICLLLATAYLTFAERKVIAYMQLRVGPS CCHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LAGPFGLLQPIADAIKLVFKEPIIPAKADRKLFIIAPIITFVLSLLGWSVIPIDHDIVLS CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHHHCCEEECCCHHHHHH RIHIGGILFILAVTSLGVYGIIIAGWASNSKYAFLGAVRSAAQMISYELAMALSIVAVLI HHHHHHHHHHHHHHHCCHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTGEMDLIQIVEAQKTRPIWLTIMMLPLAVIYFISILAKTNRLPFDLPEAESELVAGYNV HCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCC EYSSMAFAMFFLGEYANMILGSSLMTIMFLGGYLPPFNLEILTFIPGYIWFILKVSMVLF CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH CFLWIRATLPRYRYDQLMYLGLKVFLPIVLAWIIVVSTILVYSNNLPIALETVLNK HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA