| Definition | Orientia tsutsugamushi Boryong, complete genome. |
|---|---|
| Accession | NC_009488 |
| Length | 2,127,051 |
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The map label for this gene is 148285007
Identifier: 148285007
GI number: 148285007
Start: 1782763
End: 1785294
Strand: Direct
Name: 148285007
Synonym: OTBS_1847
Alternate gene names: NA
Gene position: 1782763-1785294 (Clockwise)
Preceding gene: 148285002
Following gene: 148285010
Centisome position: 83.81
GC content: 27.01
Gene sequence:
>2532_bases ATGAGGAAAAAAATTTATTTTTTTACCATTGCCTTACTGCTATTTATAGGCTCAATACTATCAATATATTTATTTAACTA TAATAGACTTTCGAAACAGGTACAACAATTTGTGCTATCAAATAAAAAATTGTCGTTTAATACTAATCTAGAGTTTAAAA ATTTTCCAGTACCTCAAGTTTGTGTTGATAATTTATCTGTAGATAATAAGCATTTTCTTATAAAGAAAGTAAAGATATAT TTTTCACCATTATCATTACTTATTTTTCAGCCTGTAATTTCGCATTTAGTAATTGAAGATGCTAATATTATGATTGATAG GCCAAGATTTGATTATATGATAAACCTAATTGATAGTATTTATGAATTTTTGCCTGGAAGCTATGATATACAAATGAAAA ATGTTAACTGTATTAATAGTAATGGCAATATAATACGTACAGTTAATGAGTTATCAGCTAATTTAATGAATGGCCATTAT CAGATTCAAGGTGTTTTTGATGGTATTCATAAAGTAAAAGGTGTACTTCCTTGTGAAAATCAACAAGAAATTAATCTAGA TTTTTCTTCTGTAAATTATGCTTTTACATTTAAAGGGGTGTTAAATAAGCATCAATTACCAGTAGGTAATTGTAAATTGT TAGTTAAAGATCTATCCAGTTTTATTAATAGTTATTATTACGATATTGATTCTATATTAACTAAATTTAATACTAATGAG CATGTTGAAATAATTTTTGATACAGAGATTACAGACCAGATGATGTCAATTAAAAATCTAAAAATTAATTCAGATTCCAT AGAAGCCGTAGGAACTCTCACTTTTTTTAATGATACACATACTGCTGATGTAATCAGTATAGCATTTAATAAGTTAATAA TGAATCAATTATTTTCTGGTAACGGTAGTAGTAATATTGCTAGCTTTCAAAGCAAAAAAACAATGAGTATTCCTACTACT GATAGTAATATCGCAATTACTGCTAAGGAAGTTATTATATGTGATGAGAAGCTTACAAATATATCTTTTATTAGTGAAGT TAGAGACCAAATTATGAATATTAGTAATTTTTCTGGTGTAATTAATTCTGGTGGTAACTTTCAAATGGTTGGAACAGTAA AACAAAATCAATATAGGTCATTATTTGAAGGGCAAGTAAAATTAGAACATAGAAATATTAATGACTTGCTATCGCTATTG AATTTAAAAAATATAGCAGTAAATGAAGTACAACCTATGCTATTTGAAAGCAACGTTAGATCTACGATTATCGATCATCA GTTATACGATATAAATATGCAGATAGGAAAGGCTAGAGTTCAAGGTAGTATGTATAATAAGTCAATAGGTAACAATTTAT CAAGGATTTATACTCGATTAACATTATTTGATTTTAACTTTGATAAATCAAATTACCCTCTAATTTCTTCACTATTAGAG TATTATCAAAGCTTGGGTACTGGCATTGAGGAACATAATTATTTGATGAAATTTGTTCCTTTAAATACTATTAATTATAA TGCATGTTTTTTTTTAAATTTTAAGTCAGTTACTTTTAAAGGGCGGAAAACCCCTAACAAGCTTGCTGTACTAGTGTATT TATCTCCTGGGCAAATAAATATTGATAATTTCTATTATGGAGATGAAAAAAATCATCTTATAGGCAAAGCTAGTTTATAT ACTAAGGATATAAAGCCTAGAATTGATATTGCAATTGATAAAGGAGAGTTGTATCTCAATACTGATAACAGTCAGCTATT TGATAATATGAAAAAGATAATTAACAAGCTAAAATACAATAAGGTTGTTGTTAATTTAAATACTAATTTACAAAAATTTT CATATAATGATAAACTGATACAGGATTTCATATCAAAATTTTCGGTTCAAGACTCAATTATTCAGGTAAAGGATATTAAT TGCCGTATTGATAATGGAGAGTTTCAAGCTAAAGGTAGTATATTAATGTCTCCGTTAGCCATGACATTAGTATATGCTTA TAACTCGTTTTATATACCTACTTTTTCTTTTATTTTACAAGATAAAGAATCTTTCTTGCCAAAAGGGTTTGCCAGTATGC AAGGCACAATTACTACTAATGGAGAAAATTTAGCTGATATAATGAATAATTTCAATGTTACAGCTAAGTTTGTTGCCAAA GATGTTGAAATAACTGATATCTCACTTGATTATCTAATTGATAGGGTTACACAAAATAATTATGTGTATGATAACTTAAA GAAAGATATTAATATAGCTGCAAATCATGGTAAGACGATCTTTCAAACAGTAGAGGGGGATTTTCAGCTCCATAAGAATG CTTTACAGTTTAGTAACTATAAACTTAATACAAAACAGTTAAACGGGGAAGGGACAGGGCTAGTTAGGTTAGATCAGAGT AAATTAGAATTTAATTCTTACTTAAATATTAATAGTACTAAGAATAGAAATAATGTATCAAATCAAAAATTATATTTGAA GGTTAATGGTAGTTATGATAAACCTATTAAAACCATTCAATTTTATCACTAA
Upstream 100 bases:
>100_bases TATGATTTTCTTAATAAGAACTGAAAAAATATGCTATAAAAACTTAATTATTAAGCATATTACAAGAATTATACAGAAAT AATTATTTAAAGTAAATTGT
Downstream 100 bases:
>100_bases CTTAAGAATTATATATGCTTAAGTAAATAAATAGCTAATGAAATTCTAATAAGACAGTTTGTGGTAATATAGAAGAGATG CTTACAATCTAAGAGAATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 843; Mature: 843
Protein sequence:
>843_residues MRKKIYFFTIALLLFIGSILSIYLFNYNRLSKQVQQFVLSNKKLSFNTNLEFKNFPVPQVCVDNLSVDNKHFLIKKVKIY FSPLSLLIFQPVISHLVIEDANIMIDRPRFDYMINLIDSIYEFLPGSYDIQMKNVNCINSNGNIIRTVNELSANLMNGHY QIQGVFDGIHKVKGVLPCENQQEINLDFSSVNYAFTFKGVLNKHQLPVGNCKLLVKDLSSFINSYYYDIDSILTKFNTNE HVEIIFDTEITDQMMSIKNLKINSDSIEAVGTLTFFNDTHTADVISIAFNKLIMNQLFSGNGSSNIASFQSKKTMSIPTT DSNIAITAKEVIICDEKLTNISFISEVRDQIMNISNFSGVINSGGNFQMVGTVKQNQYRSLFEGQVKLEHRNINDLLSLL NLKNIAVNEVQPMLFESNVRSTIIDHQLYDINMQIGKARVQGSMYNKSIGNNLSRIYTRLTLFDFNFDKSNYPLISSLLE YYQSLGTGIEEHNYLMKFVPLNTINYNACFFLNFKSVTFKGRKTPNKLAVLVYLSPGQINIDNFYYGDEKNHLIGKASLY TKDIKPRIDIAIDKGELYLNTDNSQLFDNMKKIINKLKYNKVVVNLNTNLQKFSYNDKLIQDFISKFSVQDSIIQVKDIN CRIDNGEFQAKGSILMSPLAMTLVYAYNSFYIPTFSFILQDKESFLPKGFASMQGTITTNGENLADIMNNFNVTAKFVAK DVEITDISLDYLIDRVTQNNYVYDNLKKDINIAANHGKTIFQTVEGDFQLHKNALQFSNYKLNTKQLNGEGTGLVRLDQS KLEFNSYLNINSTKNRNNVSNQKLYLKVNGSYDKPIKTIQFYH
Sequences:
>Translated_843_residues MRKKIYFFTIALLLFIGSILSIYLFNYNRLSKQVQQFVLSNKKLSFNTNLEFKNFPVPQVCVDNLSVDNKHFLIKKVKIY FSPLSLLIFQPVISHLVIEDANIMIDRPRFDYMINLIDSIYEFLPGSYDIQMKNVNCINSNGNIIRTVNELSANLMNGHY QIQGVFDGIHKVKGVLPCENQQEINLDFSSVNYAFTFKGVLNKHQLPVGNCKLLVKDLSSFINSYYYDIDSILTKFNTNE HVEIIFDTEITDQMMSIKNLKINSDSIEAVGTLTFFNDTHTADVISIAFNKLIMNQLFSGNGSSNIASFQSKKTMSIPTT DSNIAITAKEVIICDEKLTNISFISEVRDQIMNISNFSGVINSGGNFQMVGTVKQNQYRSLFEGQVKLEHRNINDLLSLL NLKNIAVNEVQPMLFESNVRSTIIDHQLYDINMQIGKARVQGSMYNKSIGNNLSRIYTRLTLFDFNFDKSNYPLISSLLE YYQSLGTGIEEHNYLMKFVPLNTINYNACFFLNFKSVTFKGRKTPNKLAVLVYLSPGQINIDNFYYGDEKNHLIGKASLY TKDIKPRIDIAIDKGELYLNTDNSQLFDNMKKIINKLKYNKVVVNLNTNLQKFSYNDKLIQDFISKFSVQDSIIQVKDIN CRIDNGEFQAKGSILMSPLAMTLVYAYNSFYIPTFSFILQDKESFLPKGFASMQGTITTNGENLADIMNNFNVTAKFVAK DVEITDISLDYLIDRVTQNNYVYDNLKKDINIAANHGKTIFQTVEGDFQLHKNALQFSNYKLNTKQLNGEGTGLVRLDQS KLEFNSYLNINSTKNRNNVSNQKLYLKVNGSYDKPIKTIQFYH >Mature_843_residues MRKKIYFFTIALLLFIGSILSIYLFNYNRLSKQVQQFVLSNKKLSFNTNLEFKNFPVPQVCVDNLSVDNKHFLIKKVKIY FSPLSLLIFQPVISHLVIEDANIMIDRPRFDYMINLIDSIYEFLPGSYDIQMKNVNCINSNGNIIRTVNELSANLMNGHY QIQGVFDGIHKVKGVLPCENQQEINLDFSSVNYAFTFKGVLNKHQLPVGNCKLLVKDLSSFINSYYYDIDSILTKFNTNE HVEIIFDTEITDQMMSIKNLKINSDSIEAVGTLTFFNDTHTADVISIAFNKLIMNQLFSGNGSSNIASFQSKKTMSIPTT DSNIAITAKEVIICDEKLTNISFISEVRDQIMNISNFSGVINSGGNFQMVGTVKQNQYRSLFEGQVKLEHRNINDLLSLL NLKNIAVNEVQPMLFESNVRSTIIDHQLYDINMQIGKARVQGSMYNKSIGNNLSRIYTRLTLFDFNFDKSNYPLISSLLE YYQSLGTGIEEHNYLMKFVPLNTINYNACFFLNFKSVTFKGRKTPNKLAVLVYLSPGQINIDNFYYGDEKNHLIGKASLY TKDIKPRIDIAIDKGELYLNTDNSQLFDNMKKIINKLKYNKVVVNLNTNLQKFSYNDKLIQDFISKFSVQDSIIQVKDIN CRIDNGEFQAKGSILMSPLAMTLVYAYNSFYIPTFSFILQDKESFLPKGFASMQGTITTNGENLADIMNNFNVTAKFVAK DVEITDISLDYLIDRVTQNNYVYDNLKKDINIAANHGKTIFQTVEGDFQLHKNALQFSNYKLNTKQLNGEGTGLVRLDQS KLEFNSYLNINSTKNRNNVSNQKLYLKVNGSYDKPIKTIQFYH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 96448; Mature: 96448
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKKIYFFTIALLLFIGSILSIYLFNYNRLSKQVQQFVLSNKKLSFNTNLEFKNFPVPQV CCCEEHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCEEEECCCEECCCCCHHH CVDNLSVDNKHFLIKKVKIYFSPLSLLIFQPVISHLVIEDANIMIDRPRFDYMINLIDSI HHCCCCCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHEEECCCEEEECCCHHHHHHHHHHH YEFLPGSYDIQMKNVNCINSNGNIIRTVNELSANLMNGHYQIQGVFDGIHKVKGVLPCEN HHHCCCCEEEEEECEEEECCCCCEEEEHHHHHHHHCCCEEEEEEHHHHHHHHCCCCCCCC QQEINLDFSSVNYAFTFKGVLNKHQLPVGNCKLLVKDLSSFINSYYYDIDSILTKFNTNE CCEEEEEEECCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC HVEIIFDTEITDQMMSIKNLKINSDSIEAVGTLTFFNDTHTADVISIAFNKLIMNQLFSG EEEEEEECCHHHHHHHHHCEEECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCC NGSSNIASFQSKKTMSIPTTDSNIAITAKEVIICDEKLTNISFISEVRDQIMNISNFSGV CCCCCCHHHCCCCEEECCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHH INSGGNFQMVGTVKQNQYRSLFEGQVKLEHRNINDLLSLLNLKNIAVNEVQPMLFESNVR CCCCCCEEEEEECCCHHHHHHHCCEEEEEECCHHHHHHHHHHCCCCHHCCCHHHHHCCCH STIIDHQLYDINMQIGKARVQGSMYNKSIGNNLSRIYTRLTLFDFNFDKSNYPLISSLLE HHHHCCEEEEEEEEECCEECCCCHHHHHHCCCHHHHHEEEEEEEECCCCCCCCHHHHHHH YYQSLGTGIEEHNYLMKFVPLNTINYNACFFLNFKSVTFKGRKTPNKLAVLVYLSPGQIN HHHHHCCCCCCCCEEEEEEEECEECCCEEEEEEEEEEEEECCCCCCEEEEEEEECCCEEE IDNFYYGDEKNHLIGKASLYTKDIKPRIDIAIDKGELYLNTDNSQLFDNMKKIINKLKYN ECCEEECCCCCCEEEEEEEEECCCCCEEEEEEECCEEEEECCCHHHHHHHHHHHHHCCCC KVVVNLNTNLQKFSYNDKLIQDFISKFSVQDSIIQVKDINCRIDNGEFQAKGSILMSPLA EEEEEECCCCEEECCCHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCEEECCCEEHHHHH MTLVYAYNSFYIPTFSFILQDKESFLPKGFASMQGTITTNGENLADIMNNFNVTAKFVAK HHHHHHHCCEECCHHHHHHHCHHHHCCCCHHHCCCEEEECCCHHHHHHHCCCEEEEEEEE DVEITDISLDYLIDRVTQNNYVYDNLKKDINIAANHGKTIFQTVEGDFQLHKNALQFSNY CCEEEEEEHHHHHHHHHCCCEEEECCCCCCEEEECCCCEEEEEECCCHHHHHHHHHHCCE KLNTKQLNGEGTGLVRLDQSKLEFNSYLNINSTKNRNNVSNQKLYLKVNGSYDKPIKTIQ EEEEEEECCCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCCEEE FYH ECC >Mature Secondary Structure MRKKIYFFTIALLLFIGSILSIYLFNYNRLSKQVQQFVLSNKKLSFNTNLEFKNFPVPQV CCCEEHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCEEEECCCEECCCCCHHH CVDNLSVDNKHFLIKKVKIYFSPLSLLIFQPVISHLVIEDANIMIDRPRFDYMINLIDSI HHCCCCCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHEEECCCEEEECCCHHHHHHHHHHH YEFLPGSYDIQMKNVNCINSNGNIIRTVNELSANLMNGHYQIQGVFDGIHKVKGVLPCEN HHHCCCCEEEEEECEEEECCCCCEEEEHHHHHHHHCCCEEEEEEHHHHHHHHCCCCCCCC QQEINLDFSSVNYAFTFKGVLNKHQLPVGNCKLLVKDLSSFINSYYYDIDSILTKFNTNE CCEEEEEEECCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC HVEIIFDTEITDQMMSIKNLKINSDSIEAVGTLTFFNDTHTADVISIAFNKLIMNQLFSG EEEEEEECCHHHHHHHHHCEEECCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCC NGSSNIASFQSKKTMSIPTTDSNIAITAKEVIICDEKLTNISFISEVRDQIMNISNFSGV CCCCCCHHHCCCCEEECCCCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHH INSGGNFQMVGTVKQNQYRSLFEGQVKLEHRNINDLLSLLNLKNIAVNEVQPMLFESNVR CCCCCCEEEEEECCCHHHHHHHCCEEEEEECCHHHHHHHHHHCCCCHHCCCHHHHHCCCH STIIDHQLYDINMQIGKARVQGSMYNKSIGNNLSRIYTRLTLFDFNFDKSNYPLISSLLE HHHHCCEEEEEEEEECCEECCCCHHHHHHCCCHHHHHEEEEEEEECCCCCCCCHHHHHHH YYQSLGTGIEEHNYLMKFVPLNTINYNACFFLNFKSVTFKGRKTPNKLAVLVYLSPGQIN HHHHHCCCCCCCCEEEEEEEECEECCCEEEEEEEEEEEEECCCCCCEEEEEEEECCCEEE IDNFYYGDEKNHLIGKASLYTKDIKPRIDIAIDKGELYLNTDNSQLFDNMKKIINKLKYN ECCEEECCCCCCEEEEEEEEECCCCCEEEEEEECCEEEEECCCHHHHHHHHHHHHHCCCC KVVVNLNTNLQKFSYNDKLIQDFISKFSVQDSIIQVKDINCRIDNGEFQAKGSILMSPLA EEEEEECCCCEEECCCHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCEEECCCEEHHHHH MTLVYAYNSFYIPTFSFILQDKESFLPKGFASMQGTITTNGENLADIMNNFNVTAKFVAK HHHHHHHCCEECCHHHHHHHCHHHHCCCCHHHCCCEEEECCCHHHHHHHCCCEEEEEEEE DVEITDISLDYLIDRVTQNNYVYDNLKKDINIAANHGKTIFQTVEGDFQLHKNALQFSNY CCEEEEEEHHHHHHHHHCCCEEEECCCCCCEEEECCCCEEEEEECCCHHHHHHHHHHCCE KLNTKQLNGEGTGLVRLDQSKLEFNSYLNINSTKNRNNVSNQKLYLKVNGSYDKPIKTIQ EEEEEEECCCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCCEEE FYH ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA