Definition Orientia tsutsugamushi Boryong, complete genome.
Accession NC_009488
Length 2,127,051

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The map label for this gene is 148284916

Identifier: 148284916

GI number: 148284916

Start: 1641865

End: 1642935

Strand: Direct

Name: 148284916

Synonym: OTBS_1690

Alternate gene names: NA

Gene position: 1641865-1642935 (Clockwise)

Preceding gene: 148284915

Following gene: 148284919

Centisome position: 77.19

GC content: 30.63

Gene sequence:

>1071_bases
GTGTTTATGTTTAAGTGTCAAGATAGTACTATAACTCTAATTAAAGCAGTAACGGAAGCAGTTCATAATATATCTGTTGC
ATTTAATAATATATATAGCAAAATTATATATAGTGAAGTTGTTACAGCAGATAGTTGTAATACTTCTCATGATAATGATT
ATGATTGCGCAATTATTGATAGAATTGACAATGTGAATTATGTAGTTAGACCAGGGATACCAAATAATTTTACATCAGTT
TTATCACGACTCATGCATTATTTTCAGGAGCCATATAAAATTCATAGGTTTTGTTCTTCATATATAAAATTAGTTTCTGG
TAGTATTGATCCTACCATTGATTATAGTAATACTACGCTTTTATATGATGCTACAAACTGCATTAATAGCAATTTTCTTC
AACAAAACTTAGATGATCCTGAAGCCTATCTTAGGCTGAACAATAGCTTTTGCTTTGGAAAGCCAGTAGGAATCGTTAGC
CATGTTTTTGCTGGTGGCTATAGCTATGTTAAAAAAAATCTAACCGAATTAGAAAGGCAACTATATTCAGGACCTCGAAT
TATGGCAATGCTGGATTGCGATGATAACACTTTAACTTCCAGGCTTATTGATACTTGTAAGGAATATATAACAATAGCAA
AAGGCTGTACTGTAAAAAGTATAATAGATGCCATTAATGAAAAGTTTTATCAAGACAATTTAGTTCAATGTTATAATTAT
CAAAATTCAACATATACTAAATATACTAAAACAGAAGAAGCAGAAGTAGGGAATAATAGTGGTGATGAAAATACTTCGAT
GTTGTCATCACTACCTGCAGAATTATATTATTACATAGCATGTGGAATAGGCGCAATAGTAGTTGGTAGTATTTATATTA
ATCGTTATTATTTAAAAAAAAAACAAACGTGTAATGCAGAAAAACAATCTGTACAATCACAAAGTAATGTGAATAACTAT
AATGATACAGAACCACAAAATTCCAGTGAAGGGATATATGCAGAGATAACAGAATACGAAGATCTAAAAGTAGTTTCTGC
TGGAGCTCAACAAGAGGACTCTACAGCATAA

Upstream 100 bases:

>100_bases
AGCTTTACTTAATTTCTTTATACATTCATTTATATATAAATTATGTGTTGATAATTGTAACTGAATGGTATAGCATTTTA
CATAGACATATTTTTGGAGG

Downstream 100 bases:

>100_bases
CTGCTTTTTTTTAAACATATATTTAAAGTAGAGTGCTGTGCATGTGGAGTTATATAATATTAAGATATCACCTATACCAT
GAAGAGTTGTGTTTAAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MFMFKCQDSTITLIKAVTEAVHNISVAFNNIYSKIIYSEVVTADSCNTSHDNDYDCAIIDRIDNVNYVVRPGIPNNFTSV
LSRLMHYFQEPYKIHRFCSSYIKLVSGSIDPTIDYSNTTLLYDATNCINSNFLQQNLDDPEAYLRLNNSFCFGKPVGIVS
HVFAGGYSYVKKNLTELERQLYSGPRIMAMLDCDDNTLTSRLIDTCKEYITIAKGCTVKSIIDAINEKFYQDNLVQCYNY
QNSTYTKYTKTEEAEVGNNSGDENTSMLSSLPAELYYYIACGIGAIVVGSIYINRYYLKKKQTCNAEKQSVQSQSNVNNY
NDTEPQNSSEGIYAEITEYEDLKVVSAGAQQEDSTA

Sequences:

>Translated_356_residues
MFMFKCQDSTITLIKAVTEAVHNISVAFNNIYSKIIYSEVVTADSCNTSHDNDYDCAIIDRIDNVNYVVRPGIPNNFTSV
LSRLMHYFQEPYKIHRFCSSYIKLVSGSIDPTIDYSNTTLLYDATNCINSNFLQQNLDDPEAYLRLNNSFCFGKPVGIVS
HVFAGGYSYVKKNLTELERQLYSGPRIMAMLDCDDNTLTSRLIDTCKEYITIAKGCTVKSIIDAINEKFYQDNLVQCYNY
QNSTYTKYTKTEEAEVGNNSGDENTSMLSSLPAELYYYIACGIGAIVVGSIYINRYYLKKKQTCNAEKQSVQSQSNVNNY
NDTEPQNSSEGIYAEITEYEDLKVVSAGAQQEDSTA
>Mature_356_residues
MFMFKCQDSTITLIKAVTEAVHNISVAFNNIYSKIIYSEVVTADSCNTSHDNDYDCAIIDRIDNVNYVVRPGIPNNFTSV
LSRLMHYFQEPYKIHRFCSSYIKLVSGSIDPTIDYSNTTLLYDATNCINSNFLQQNLDDPEAYLRLNNSFCFGKPVGIVS
HVFAGGYSYVKKNLTELERQLYSGPRIMAMLDCDDNTLTSRLIDTCKEYITIAKGCTVKSIIDAINEKFYQDNLVQCYNY
QNSTYTKYTKTEEAEVGNNSGDENTSMLSSLPAELYYYIACGIGAIVVGSIYINRYYLKKKQTCNAEKQSVQSQSNVNNY
NDTEPQNSSEGIYAEITEYEDLKVVSAGAQQEDSTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40162; Mature: 40162

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFMFKCQDSTITLIKAVTEAVHNISVAFNNIYSKIIYSEVVTADSCNTSHDNDYDCAIID
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEE
RIDNVNYVVRPGIPNNFTSVLSRLMHYFQEPYKIHRFCSSYIKLVSGSIDPTIDYSNTTL
CCCCCCEEEECCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCEECCCEEE
LYDATNCINSNFLQQNLDDPEAYLRLNNSFCFGKPVGIVSHVFAGGYSYVKKNLTELERQ
EEECHHHHHHHHHHCCCCCCHHHEEECCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHH
LYSGPRIMAMLDCDDNTLTSRLIDTCKEYITIAKGCTVKSIIDAINEKFYQDNLVQCYNY
HHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHEEECC
QNSTYTKYTKTEEAEVGNNSGDENTSMLSSLPAELYYYIACGIGAIVVGSIYINRYYLKK
CCCCEEEECCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQTCNAEKQSVQSQSNVNNYNDTEPQNSSEGIYAEITEYEDLKVVSAGAQQEDSTA
HHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCC
>Mature Secondary Structure
MFMFKCQDSTITLIKAVTEAVHNISVAFNNIYSKIIYSEVVTADSCNTSHDNDYDCAIID
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEE
RIDNVNYVVRPGIPNNFTSVLSRLMHYFQEPYKIHRFCSSYIKLVSGSIDPTIDYSNTTL
CCCCCCEEEECCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCEECCCEEE
LYDATNCINSNFLQQNLDDPEAYLRLNNSFCFGKPVGIVSHVFAGGYSYVKKNLTELERQ
EEECHHHHHHHHHHCCCCCCHHHEEECCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHH
LYSGPRIMAMLDCDDNTLTSRLIDTCKEYITIAKGCTVKSIIDAINEKFYQDNLVQCYNY
HHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHEEECC
QNSTYTKYTKTEEAEVGNNSGDENTSMLSSLPAELYYYIACGIGAIVVGSIYINRYYLKK
CCCCEEEECCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQTCNAEKQSVQSQSNVNNYNDTEPQNSSEGIYAEITEYEDLKVVSAGAQQEDSTA
HHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA