Definition Orientia tsutsugamushi Boryong, complete genome.
Accession NC_009488
Length 2,127,051

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The map label for this gene is 148284910

Identifier: 148284910

GI number: 148284910

Start: 1633156

End: 1634943

Strand: Direct

Name: 148284910

Synonym: OTBS_1682

Alternate gene names: NA

Gene position: 1633156-1634943 (Clockwise)

Preceding gene: 148284909

Following gene: 148284911

Centisome position: 76.78

GC content: 29.98

Gene sequence:

>1788_bases
ATGGGACAGGTCATTAAAGCAGCAACAAGAATATTTGCAGGAGTGCATAATTTTAGTAAAGCTTTAGCATCTAACAAAAG
CACATTGGCAAATAATCATCATTGGTTTAATACACAAAATTATTCTAATTCTTTTTCTACAGTTTCAACAAATAGTCATG
TTGTTAATCAAGCTGAGAGTACGTCAATACAAGATTATTCAAAGCACAGTGATTCAAATAAGCAATCTCAACTCTTTAAA
CTATGTGAGTCAGAAAAGAATGCTCAATCATTAGCAGTTTTAATAAAATTAATGAGCAGCAGCAATGTAAATCATATAGA
CAATGTGGGTGAAAGTTTTGTTCACAAAATTGGAAAAAATAGTAAGCTAAATTTACTAGACAAGTATTATCTTTTCTGTC
AGCTGAAAGCTAAAGGGGCAAATTTTGAGCAAGAAAATAAAGTTGGTAATACAGTTGCTAATGTTTTGCTTGAAAAATAT
ATAGAAACTGGAGATTCTAAAATATTATCATATTTTCTGAATAATACAGAAATTTACAGTCCTAATAAGGCATTCTTGCT
TTCTCTTATGCGATATATTCAAGAAGAAGGTAATCCTAAGCAGGACGAAATGAATTTATTTGTAAAAACCATCGAAAATC
TACCAAAAAAAAATATTCTGCTGAGTAACGGCGAAGAAATGATGGTTTTAAAACTGTTACTGTCTTATGGATTATCATCA
TCTTGTACTTTACATAATCAAGATAAAATATTACATGCAGCTAAAAGTATTATAAATTATTATCCACAAGCTTTAGGAAA
AGCTGCAGTTGATGAATTTATAAAATATATACAATACAGTGATACTGTTTCATCATCTGTAGCTAAGTTTGGAGTATTAG
TTATACAGCATTTATCTAGTGATGAAGCTGGCAGTCAGCGTTTAATATTAGACTCCTTAGCTAAAAAATATTCATATGCA
GATAAATCAAAAATATTACAGTCTGCTATAGAAGCATCAGATTCTGAAGCACTAAATATTAAAGATTTATCTAATAAAGG
AAATACATTTTTGCATGTTCTTAAAAAATCTAGCCTGCAAGACTATCATAAGCTTATTGGTTGTGCTATGGCTTATGGAG
CTGATGTTTTGCAAAATGATAAAGGTAAAACTATCTTACAAAAAATTGACCTAAAGAGTTATGATGATCAGCTTCTGATC
CGTGAAATCATATCAAATGGTTGCTTAGATAAGTTATGTATTGCAAGTGATGCCATTGGTAAATCTCTCTTTCAAAAAGC
AATTAAATTTATAGCAAAAGGAAAGTTGTTTATATTACCAGAAATTAAGAATGCAATTCTAGAGTTTAATCCAAGTCAGG
CTTTATCATCTTTAGCAAAAATGTGTAATAACCGTAAAGTTGACTTAAAGACAGCACTGGAACTTATACAAGATCTTAGC
ACTAAAACTGATCTAAGTAATTTTGTGATGAATTGTTCGCATAGCACTTTAAAAGAAATATCTAAGTTACCATATTGGCA
TGCATTAATTAATTCATTAGAACAAAATGATTGTATAGCTTCATTAACGAGCGCAAATGGAAAATTATATCCTGTATTAG
AAAGTAAAAAAGAAACTGAATTAAGTAGTGTGTCAGCTTTTGAGCGTAAATTTGCTCCTTCTGTACCGGAAACATTAGAT
ATTGATCAGTATTTCTTACATGAGAAAAATTTAATTGTGAATGATAGCACTTCAGAAAATGTGGATATGTACTTACCAAC
TGTACAAGCAATTGGTCAGATATCATAA

Upstream 100 bases:

>100_bases
TTAATTTTGGGATAGTAGTAAGCTTAAATTAATAGTTTTAGGTTGGTGGTTTCTAAAATCTATTAACATCATGTAACAAT
AAAAGCAAGGGAGGTCTTAT

Downstream 100 bases:

>100_bases
TGTGCAATGTAAATCTATTAATGAGAGAGATTGGGTTAAACGATAAATGATATCAAAATAAATTTAGTAAATAACTTCTT
AGTCTATTGTTAAACACTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 595; Mature: 594

Protein sequence:

>595_residues
MGQVIKAATRIFAGVHNFSKALASNKSTLANNHHWFNTQNYSNSFSTVSTNSHVVNQAESTSIQDYSKHSDSNKQSQLFK
LCESEKNAQSLAVLIKLMSSSNVNHIDNVGESFVHKIGKNSKLNLLDKYYLFCQLKAKGANFEQENKVGNTVANVLLEKY
IETGDSKILSYFLNNTEIYSPNKAFLLSLMRYIQEEGNPKQDEMNLFVKTIENLPKKNILLSNGEEMMVLKLLLSYGLSS
SCTLHNQDKILHAAKSIINYYPQALGKAAVDEFIKYIQYSDTVSSSVAKFGVLVIQHLSSDEAGSQRLILDSLAKKYSYA
DKSKILQSAIEASDSEALNIKDLSNKGNTFLHVLKKSSLQDYHKLIGCAMAYGADVLQNDKGKTILQKIDLKSYDDQLLI
REIISNGCLDKLCIASDAIGKSLFQKAIKFIAKGKLFILPEIKNAILEFNPSQALSSLAKMCNNRKVDLKTALELIQDLS
TKTDLSNFVMNCSHSTLKEISKLPYWHALINSLEQNDCIASLTSANGKLYPVLESKKETELSSVSAFERKFAPSVPETLD
IDQYFLHEKNLIVNDSTSENVDMYLPTVQAIGQIS

Sequences:

>Translated_595_residues
MGQVIKAATRIFAGVHNFSKALASNKSTLANNHHWFNTQNYSNSFSTVSTNSHVVNQAESTSIQDYSKHSDSNKQSQLFK
LCESEKNAQSLAVLIKLMSSSNVNHIDNVGESFVHKIGKNSKLNLLDKYYLFCQLKAKGANFEQENKVGNTVANVLLEKY
IETGDSKILSYFLNNTEIYSPNKAFLLSLMRYIQEEGNPKQDEMNLFVKTIENLPKKNILLSNGEEMMVLKLLLSYGLSS
SCTLHNQDKILHAAKSIINYYPQALGKAAVDEFIKYIQYSDTVSSSVAKFGVLVIQHLSSDEAGSQRLILDSLAKKYSYA
DKSKILQSAIEASDSEALNIKDLSNKGNTFLHVLKKSSLQDYHKLIGCAMAYGADVLQNDKGKTILQKIDLKSYDDQLLI
REIISNGCLDKLCIASDAIGKSLFQKAIKFIAKGKLFILPEIKNAILEFNPSQALSSLAKMCNNRKVDLKTALELIQDLS
TKTDLSNFVMNCSHSTLKEISKLPYWHALINSLEQNDCIASLTSANGKLYPVLESKKETELSSVSAFERKFAPSVPETLD
IDQYFLHEKNLIVNDSTSENVDMYLPTVQAIGQIS
>Mature_594_residues
GQVIKAATRIFAGVHNFSKALASNKSTLANNHHWFNTQNYSNSFSTVSTNSHVVNQAESTSIQDYSKHSDSNKQSQLFKL
CESEKNAQSLAVLIKLMSSSNVNHIDNVGESFVHKIGKNSKLNLLDKYYLFCQLKAKGANFEQENKVGNTVANVLLEKYI
ETGDSKILSYFLNNTEIYSPNKAFLLSLMRYIQEEGNPKQDEMNLFVKTIENLPKKNILLSNGEEMMVLKLLLSYGLSSS
CTLHNQDKILHAAKSIINYYPQALGKAAVDEFIKYIQYSDTVSSSVAKFGVLVIQHLSSDEAGSQRLILDSLAKKYSYAD
KSKILQSAIEASDSEALNIKDLSNKGNTFLHVLKKSSLQDYHKLIGCAMAYGADVLQNDKGKTILQKIDLKSYDDQLLIR
EIISNGCLDKLCIASDAIGKSLFQKAIKFIAKGKLFILPEIKNAILEFNPSQALSSLAKMCNNRKVDLKTALELIQDLST
KTDLSNFVMNCSHSTLKEISKLPYWHALINSLEQNDCIASLTSANGKLYPVLESKKETELSSVSAFERKFAPSVPETLDI
DQYFLHEKNLIVNDSTSENVDMYLPTVQAIGQIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66281; Mature: 66150

Theoretical pI: Translated: 8.14; Mature: 8.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQVIKAATRIFAGVHNFSKALASNKSTLANNHHWFNTQNYSNSFSTVSTNSHVVNQAES
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCEECCCCHHHCCHHC
TSIQDYSKHSDSNKQSQLFKLCESEKNAQSLAVLIKLMSSSNVNHIDNVGESFVHKIGKN
CCHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
SKLNLLDKYYLFCQLKAKGANFEQENKVGNTVANVLLEKYIETGDSKILSYFLNNTEIYS
CCCHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEC
PNKAFLLSLMRYIQEEGNPKQDEMNLFVKTIENLPKKNILLSNGEEMMVLKLLLSYGLSS
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHCCCC
SCTLHNQDKILHAAKSIINYYPQALGKAAVDEFIKYIQYSDTVSSSVAKFGVLVIQHLSS
CCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DEAGSQRLILDSLAKKYSYADKSKILQSAIEASDSEALNIKDLSNKGNTFLHVLKKSSLQ
CCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCEEHHHCCCCCCHHHHHHHHHHHH
DYHKLIGCAMAYGADVLQNDKGKTILQKIDLKSYDDQLLIREIISNGCLDKLCIASDAIG
HHHHHHHHHHHHCHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHH
KSLFQKAIKFIAKGKLFILPEIKNAILEFNPSQALSSLAKMCNNRKVDLKTALELIQDLS
HHHHHHHHHHHHCCCEEEEEHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
TKTDLSNFVMNCSHSTLKEISKLPYWHALINSLEQNDCIASLTSANGKLYPVLESKKETE
HHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHH
LSSVSAFERKFAPSVPETLDIDQYFLHEKNLIVNDSTSENVDMYLPTVQAIGQIS
HHHHHHHHHHCCCCCCCCCCCHHHHHHCCCEEEECCCCCCCEEEEHHHHHHCCCC
>Mature Secondary Structure 
GQVIKAATRIFAGVHNFSKALASNKSTLANNHHWFNTQNYSNSFSTVSTNSHVVNQAES
CHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCEECCCCHHHCCHHC
TSIQDYSKHSDSNKQSQLFKLCESEKNAQSLAVLIKLMSSSNVNHIDNVGESFVHKIGKN
CCHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
SKLNLLDKYYLFCQLKAKGANFEQENKVGNTVANVLLEKYIETGDSKILSYFLNNTEIYS
CCCHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEC
PNKAFLLSLMRYIQEEGNPKQDEMNLFVKTIENLPKKNILLSNGEEMMVLKLLLSYGLSS
CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHCCCC
SCTLHNQDKILHAAKSIINYYPQALGKAAVDEFIKYIQYSDTVSSSVAKFGVLVIQHLSS
CCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DEAGSQRLILDSLAKKYSYADKSKILQSAIEASDSEALNIKDLSNKGNTFLHVLKKSSLQ
CCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCEEHHHCCCCCCHHHHHHHHHHHH
DYHKLIGCAMAYGADVLQNDKGKTILQKIDLKSYDDQLLIREIISNGCLDKLCIASDAIG
HHHHHHHHHHHHCHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHH
KSLFQKAIKFIAKGKLFILPEIKNAILEFNPSQALSSLAKMCNNRKVDLKTALELIQDLS
HHHHHHHHHHHHCCCEEEEEHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
TKTDLSNFVMNCSHSTLKEISKLPYWHALINSLEQNDCIASLTSANGKLYPVLESKKETE
HHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHH
LSSVSAFERKFAPSVPETLDIDQYFLHEKNLIVNDSTSENVDMYLPTVQAIGQIS
HHHHHHHHHHCCCCCCCCCCCHHHHHHCCCEEEECCCCCCCEEEEHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA