| Definition | Orientia tsutsugamushi Boryong, complete genome. |
|---|---|
| Accession | NC_009488 |
| Length | 2,127,051 |
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The map label for this gene is 148284910
Identifier: 148284910
GI number: 148284910
Start: 1633156
End: 1634943
Strand: Direct
Name: 148284910
Synonym: OTBS_1682
Alternate gene names: NA
Gene position: 1633156-1634943 (Clockwise)
Preceding gene: 148284909
Following gene: 148284911
Centisome position: 76.78
GC content: 29.98
Gene sequence:
>1788_bases ATGGGACAGGTCATTAAAGCAGCAACAAGAATATTTGCAGGAGTGCATAATTTTAGTAAAGCTTTAGCATCTAACAAAAG CACATTGGCAAATAATCATCATTGGTTTAATACACAAAATTATTCTAATTCTTTTTCTACAGTTTCAACAAATAGTCATG TTGTTAATCAAGCTGAGAGTACGTCAATACAAGATTATTCAAAGCACAGTGATTCAAATAAGCAATCTCAACTCTTTAAA CTATGTGAGTCAGAAAAGAATGCTCAATCATTAGCAGTTTTAATAAAATTAATGAGCAGCAGCAATGTAAATCATATAGA CAATGTGGGTGAAAGTTTTGTTCACAAAATTGGAAAAAATAGTAAGCTAAATTTACTAGACAAGTATTATCTTTTCTGTC AGCTGAAAGCTAAAGGGGCAAATTTTGAGCAAGAAAATAAAGTTGGTAATACAGTTGCTAATGTTTTGCTTGAAAAATAT ATAGAAACTGGAGATTCTAAAATATTATCATATTTTCTGAATAATACAGAAATTTACAGTCCTAATAAGGCATTCTTGCT TTCTCTTATGCGATATATTCAAGAAGAAGGTAATCCTAAGCAGGACGAAATGAATTTATTTGTAAAAACCATCGAAAATC TACCAAAAAAAAATATTCTGCTGAGTAACGGCGAAGAAATGATGGTTTTAAAACTGTTACTGTCTTATGGATTATCATCA TCTTGTACTTTACATAATCAAGATAAAATATTACATGCAGCTAAAAGTATTATAAATTATTATCCACAAGCTTTAGGAAA AGCTGCAGTTGATGAATTTATAAAATATATACAATACAGTGATACTGTTTCATCATCTGTAGCTAAGTTTGGAGTATTAG TTATACAGCATTTATCTAGTGATGAAGCTGGCAGTCAGCGTTTAATATTAGACTCCTTAGCTAAAAAATATTCATATGCA GATAAATCAAAAATATTACAGTCTGCTATAGAAGCATCAGATTCTGAAGCACTAAATATTAAAGATTTATCTAATAAAGG AAATACATTTTTGCATGTTCTTAAAAAATCTAGCCTGCAAGACTATCATAAGCTTATTGGTTGTGCTATGGCTTATGGAG CTGATGTTTTGCAAAATGATAAAGGTAAAACTATCTTACAAAAAATTGACCTAAAGAGTTATGATGATCAGCTTCTGATC CGTGAAATCATATCAAATGGTTGCTTAGATAAGTTATGTATTGCAAGTGATGCCATTGGTAAATCTCTCTTTCAAAAAGC AATTAAATTTATAGCAAAAGGAAAGTTGTTTATATTACCAGAAATTAAGAATGCAATTCTAGAGTTTAATCCAAGTCAGG CTTTATCATCTTTAGCAAAAATGTGTAATAACCGTAAAGTTGACTTAAAGACAGCACTGGAACTTATACAAGATCTTAGC ACTAAAACTGATCTAAGTAATTTTGTGATGAATTGTTCGCATAGCACTTTAAAAGAAATATCTAAGTTACCATATTGGCA TGCATTAATTAATTCATTAGAACAAAATGATTGTATAGCTTCATTAACGAGCGCAAATGGAAAATTATATCCTGTATTAG AAAGTAAAAAAGAAACTGAATTAAGTAGTGTGTCAGCTTTTGAGCGTAAATTTGCTCCTTCTGTACCGGAAACATTAGAT ATTGATCAGTATTTCTTACATGAGAAAAATTTAATTGTGAATGATAGCACTTCAGAAAATGTGGATATGTACTTACCAAC TGTACAAGCAATTGGTCAGATATCATAA
Upstream 100 bases:
>100_bases TTAATTTTGGGATAGTAGTAAGCTTAAATTAATAGTTTTAGGTTGGTGGTTTCTAAAATCTATTAACATCATGTAACAAT AAAAGCAAGGGAGGTCTTAT
Downstream 100 bases:
>100_bases TGTGCAATGTAAATCTATTAATGAGAGAGATTGGGTTAAACGATAAATGATATCAAAATAAATTTAGTAAATAACTTCTT AGTCTATTGTTAAACACTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 595; Mature: 594
Protein sequence:
>595_residues MGQVIKAATRIFAGVHNFSKALASNKSTLANNHHWFNTQNYSNSFSTVSTNSHVVNQAESTSIQDYSKHSDSNKQSQLFK LCESEKNAQSLAVLIKLMSSSNVNHIDNVGESFVHKIGKNSKLNLLDKYYLFCQLKAKGANFEQENKVGNTVANVLLEKY IETGDSKILSYFLNNTEIYSPNKAFLLSLMRYIQEEGNPKQDEMNLFVKTIENLPKKNILLSNGEEMMVLKLLLSYGLSS SCTLHNQDKILHAAKSIINYYPQALGKAAVDEFIKYIQYSDTVSSSVAKFGVLVIQHLSSDEAGSQRLILDSLAKKYSYA DKSKILQSAIEASDSEALNIKDLSNKGNTFLHVLKKSSLQDYHKLIGCAMAYGADVLQNDKGKTILQKIDLKSYDDQLLI REIISNGCLDKLCIASDAIGKSLFQKAIKFIAKGKLFILPEIKNAILEFNPSQALSSLAKMCNNRKVDLKTALELIQDLS TKTDLSNFVMNCSHSTLKEISKLPYWHALINSLEQNDCIASLTSANGKLYPVLESKKETELSSVSAFERKFAPSVPETLD IDQYFLHEKNLIVNDSTSENVDMYLPTVQAIGQIS
Sequences:
>Translated_595_residues MGQVIKAATRIFAGVHNFSKALASNKSTLANNHHWFNTQNYSNSFSTVSTNSHVVNQAESTSIQDYSKHSDSNKQSQLFK LCESEKNAQSLAVLIKLMSSSNVNHIDNVGESFVHKIGKNSKLNLLDKYYLFCQLKAKGANFEQENKVGNTVANVLLEKY IETGDSKILSYFLNNTEIYSPNKAFLLSLMRYIQEEGNPKQDEMNLFVKTIENLPKKNILLSNGEEMMVLKLLLSYGLSS SCTLHNQDKILHAAKSIINYYPQALGKAAVDEFIKYIQYSDTVSSSVAKFGVLVIQHLSSDEAGSQRLILDSLAKKYSYA DKSKILQSAIEASDSEALNIKDLSNKGNTFLHVLKKSSLQDYHKLIGCAMAYGADVLQNDKGKTILQKIDLKSYDDQLLI REIISNGCLDKLCIASDAIGKSLFQKAIKFIAKGKLFILPEIKNAILEFNPSQALSSLAKMCNNRKVDLKTALELIQDLS TKTDLSNFVMNCSHSTLKEISKLPYWHALINSLEQNDCIASLTSANGKLYPVLESKKETELSSVSAFERKFAPSVPETLD IDQYFLHEKNLIVNDSTSENVDMYLPTVQAIGQIS >Mature_594_residues GQVIKAATRIFAGVHNFSKALASNKSTLANNHHWFNTQNYSNSFSTVSTNSHVVNQAESTSIQDYSKHSDSNKQSQLFKL CESEKNAQSLAVLIKLMSSSNVNHIDNVGESFVHKIGKNSKLNLLDKYYLFCQLKAKGANFEQENKVGNTVANVLLEKYI ETGDSKILSYFLNNTEIYSPNKAFLLSLMRYIQEEGNPKQDEMNLFVKTIENLPKKNILLSNGEEMMVLKLLLSYGLSSS CTLHNQDKILHAAKSIINYYPQALGKAAVDEFIKYIQYSDTVSSSVAKFGVLVIQHLSSDEAGSQRLILDSLAKKYSYAD KSKILQSAIEASDSEALNIKDLSNKGNTFLHVLKKSSLQDYHKLIGCAMAYGADVLQNDKGKTILQKIDLKSYDDQLLIR EIISNGCLDKLCIASDAIGKSLFQKAIKFIAKGKLFILPEIKNAILEFNPSQALSSLAKMCNNRKVDLKTALELIQDLST KTDLSNFVMNCSHSTLKEISKLPYWHALINSLEQNDCIASLTSANGKLYPVLESKKETELSSVSAFERKFAPSVPETLDI DQYFLHEKNLIVNDSTSENVDMYLPTVQAIGQIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66281; Mature: 66150
Theoretical pI: Translated: 8.14; Mature: 8.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQVIKAATRIFAGVHNFSKALASNKSTLANNHHWFNTQNYSNSFSTVSTNSHVVNQAES CCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCEECCCCHHHCCHHC TSIQDYSKHSDSNKQSQLFKLCESEKNAQSLAVLIKLMSSSNVNHIDNVGESFVHKIGKN CCHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC SKLNLLDKYYLFCQLKAKGANFEQENKVGNTVANVLLEKYIETGDSKILSYFLNNTEIYS CCCHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEC PNKAFLLSLMRYIQEEGNPKQDEMNLFVKTIENLPKKNILLSNGEEMMVLKLLLSYGLSS CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHCCCC SCTLHNQDKILHAAKSIINYYPQALGKAAVDEFIKYIQYSDTVSSSVAKFGVLVIQHLSS CCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DEAGSQRLILDSLAKKYSYADKSKILQSAIEASDSEALNIKDLSNKGNTFLHVLKKSSLQ CCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCEEHHHCCCCCCHHHHHHHHHHHH DYHKLIGCAMAYGADVLQNDKGKTILQKIDLKSYDDQLLIREIISNGCLDKLCIASDAIG HHHHHHHHHHHHCHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHH KSLFQKAIKFIAKGKLFILPEIKNAILEFNPSQALSSLAKMCNNRKVDLKTALELIQDLS HHHHHHHHHHHHCCCEEEEEHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH TKTDLSNFVMNCSHSTLKEISKLPYWHALINSLEQNDCIASLTSANGKLYPVLESKKETE HHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHH LSSVSAFERKFAPSVPETLDIDQYFLHEKNLIVNDSTSENVDMYLPTVQAIGQIS HHHHHHHHHHCCCCCCCCCCCHHHHHHCCCEEEECCCCCCCEEEEHHHHHHCCCC >Mature Secondary Structure GQVIKAATRIFAGVHNFSKALASNKSTLANNHHWFNTQNYSNSFSTVSTNSHVVNQAES CHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCEECCCCHHHCCHHC TSIQDYSKHSDSNKQSQLFKLCESEKNAQSLAVLIKLMSSSNVNHIDNVGESFVHKIGKN CCHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC SKLNLLDKYYLFCQLKAKGANFEQENKVGNTVANVLLEKYIETGDSKILSYFLNNTEIYS CCCHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEC PNKAFLLSLMRYIQEEGNPKQDEMNLFVKTIENLPKKNILLSNGEEMMVLKLLLSYGLSS CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHCCCC SCTLHNQDKILHAAKSIINYYPQALGKAAVDEFIKYIQYSDTVSSSVAKFGVLVIQHLSS CCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DEAGSQRLILDSLAKKYSYADKSKILQSAIEASDSEALNIKDLSNKGNTFLHVLKKSSLQ CCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCEEHHHCCCCCCHHHHHHHHHHHH DYHKLIGCAMAYGADVLQNDKGKTILQKIDLKSYDDQLLIREIISNGCLDKLCIASDAIG HHHHHHHHHHHHCHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHH KSLFQKAIKFIAKGKLFILPEIKNAILEFNPSQALSSLAKMCNNRKVDLKTALELIQDLS HHHHHHHHHHHHCCCEEEEEHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH TKTDLSNFVMNCSHSTLKEISKLPYWHALINSLEQNDCIASLTSANGKLYPVLESKKETE HHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHH LSSVSAFERKFAPSVPETLDIDQYFLHEKNLIVNDSTSENVDMYLPTVQAIGQIS HHHHHHHHHHCCCCCCCCCCCHHHHHHCCCEEEECCCCCCCEEEEHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA