| Definition | Orientia tsutsugamushi Boryong, complete genome. |
|---|---|
| Accession | NC_009488 |
| Length | 2,127,051 |
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The map label for this gene is tlc [H]
Identifier: 148284886
GI number: 148284886
Start: 1586874
End: 1588373
Strand: Direct
Name: tlc [H]
Synonym: OTBS_1636
Alternate gene names: 148284886
Gene position: 1586874-1588373 (Clockwise)
Preceding gene: 148284884
Following gene: 148284887
Centisome position: 74.6
GC content: 28.8
Gene sequence:
>1500_bases ATGGCTATCTCCAAGATAAAGCTTTTTTTTTCTAGATTGGTTATTCATTTATGGCCTGTGCACCGCCATGAGCTGCAAAA ATTTATTCCTACAGCTCTTTTAATGTTTTTCATACTTTTTAATCAAAATATTCTGCGTATTCTTAAAGATAGTATTGTAA TACCAGAAATAAGTGCTGAAATTACAAGTTTTATAAAAGCATATTGTGTTACACCAACAGCAGCATTGCTTGTAATACTA TATGCATATATGGTTAATAATTTAAATTATGAAAAAATATACCGGTATTTAACATTAGCATTTTTATCATTTTTTCTTTG TTTTGCTTTTTGGTTTTATCCCAAAGCAAGTATATTTCACCTAAACATTGAAAAAGTTAACGAGTTAATGTTAATTTATC CACATTTTAAATGGTATATAGCTCTTGCTGCTAATTGGAGTTACATAATTTTTTATGTATTATCAGAACTATGGCCTAAT ATATTCTATGCTTTATTATTTTGGCAATTGGTTAATGAAATTACTACTACTGAAGAAGCTAAACGTTTCTATATGCTGTT TTCATTATTTGGCAATTCTTCTTTAATAGTTGTAGGATTAATTGTAATGCATCTAGCATCTAGCAACTCTATACTTCAGG GGTATTTTTTAGGAGTATCAAATAACATATTACTTGTACAGTCTTCAATAGCTATAATGGCAGCTAGCTCTATATGCTCA ATTTTTTTAGTACGATTTATTTATTATAATGCTATACCAAAAACACAGTTACAGCATAAAATGCAGCATGAAAGAGAAGC GAGACCAAAAATGAATTTACATGAAAGCTTCAAGTATATTATTTCATCAAGATATTTATGGCTTATTTTAATTTGCACTG CTTCTTTTGGTTTTAGTATGAATTTAGTTGAAGGGATTTGGAAAGCTCAAATTAAAAACTTATACTCTACTACTAATACA TATGCTGAGTTTAATGGCTCTTGTGTTGTATGGACAGGAGTATTAATAATTTTCTTAACAATTATTGGCAATAGTGTACT ACGATATCATAGCTGGTTTGTAGTTGCTATTATTACTCCTATTATTATTATTACTACTGGTACAATATTTTTTATTTTTG TAGTCTTTGATAAAGACATATTATTATGGGTTAATATGCTAAGTTCCGCCCAGCCTATTGCTATAGCTGTAATGGCTGGT GCAATTCAAAATATTATTGCTAAAGGAGCTAAATACTCAATATGGGATACATCAAAGGAAATGTTATATATTCCGCTTGA TAAAGAGCTAAAAACTAAAGGAAAAGCTGCTGTTGATATAATTAGTGCTAAAGTAGGAAAATCTTCAGGTGGATTAATTC AGTCTCTTTTATTTGTTCTATTTCCAACAGCGAGCTATATTTCACTTTCTCCAGCTTTAATGATAATTTTTATTGTAGTA TGTATAGTATGGATTTTTGCTGTTAAGCAAATTTATTCAGAATATAAAAAAATAGCGTAA
Upstream 100 bases:
>100_bases ATTACTCTTAATTAACTACAATTCAGTTCTCATTCTCAGAATGCAAAAATATAAGGTATTAGCATTTGTTTGAAATAAGC TGTAGGAGTAAATCTTAAGT
Downstream 100 bases:
>100_bases TTTATTGATTATTAAATATAGCAAAAGAGATACATTTGTTAATCGTATGTAAGGTACAAATAAGGAATATTATAAGTTTA TTGATTAAACAAAAAATTAA
Product: ADP/ATP carrier protein
Products: NA
Alternate protein names: ADP/ATP translocase 5 [H]
Number of amino acids: Translated: 499; Mature: 498
Protein sequence:
>499_residues MAISKIKLFFSRLVIHLWPVHRHELQKFIPTALLMFFILFNQNILRILKDSIVIPEISAEITSFIKAYCVTPTAALLVIL YAYMVNNLNYEKIYRYLTLAFLSFFLCFAFWFYPKASIFHLNIEKVNELMLIYPHFKWYIALAANWSYIIFYVLSELWPN IFYALLFWQLVNEITTTEEAKRFYMLFSLFGNSSLIVVGLIVMHLASSNSILQGYFLGVSNNILLVQSSIAIMAASSICS IFLVRFIYYNAIPKTQLQHKMQHEREARPKMNLHESFKYIISSRYLWLILICTASFGFSMNLVEGIWKAQIKNLYSTTNT YAEFNGSCVVWTGVLIIFLTIIGNSVLRYHSWFVVAIITPIIIITTGTIFFIFVVFDKDILLWVNMLSSAQPIAIAVMAG AIQNIIAKGAKYSIWDTSKEMLYIPLDKELKTKGKAAVDIISAKVGKSSGGLIQSLLFVLFPTASYISLSPALMIIFIVV CIVWIFAVKQIYSEYKKIA
Sequences:
>Translated_499_residues MAISKIKLFFSRLVIHLWPVHRHELQKFIPTALLMFFILFNQNILRILKDSIVIPEISAEITSFIKAYCVTPTAALLVIL YAYMVNNLNYEKIYRYLTLAFLSFFLCFAFWFYPKASIFHLNIEKVNELMLIYPHFKWYIALAANWSYIIFYVLSELWPN IFYALLFWQLVNEITTTEEAKRFYMLFSLFGNSSLIVVGLIVMHLASSNSILQGYFLGVSNNILLVQSSIAIMAASSICS IFLVRFIYYNAIPKTQLQHKMQHEREARPKMNLHESFKYIISSRYLWLILICTASFGFSMNLVEGIWKAQIKNLYSTTNT YAEFNGSCVVWTGVLIIFLTIIGNSVLRYHSWFVVAIITPIIIITTGTIFFIFVVFDKDILLWVNMLSSAQPIAIAVMAG AIQNIIAKGAKYSIWDTSKEMLYIPLDKELKTKGKAAVDIISAKVGKSSGGLIQSLLFVLFPTASYISLSPALMIIFIVV CIVWIFAVKQIYSEYKKIA >Mature_498_residues AISKIKLFFSRLVIHLWPVHRHELQKFIPTALLMFFILFNQNILRILKDSIVIPEISAEITSFIKAYCVTPTAALLVILY AYMVNNLNYEKIYRYLTLAFLSFFLCFAFWFYPKASIFHLNIEKVNELMLIYPHFKWYIALAANWSYIIFYVLSELWPNI FYALLFWQLVNEITTTEEAKRFYMLFSLFGNSSLIVVGLIVMHLASSNSILQGYFLGVSNNILLVQSSIAIMAASSICSI FLVRFIYYNAIPKTQLQHKMQHEREARPKMNLHESFKYIISSRYLWLILICTASFGFSMNLVEGIWKAQIKNLYSTTNTY AEFNGSCVVWTGVLIIFLTIIGNSVLRYHSWFVVAIITPIIIITTGTIFFIFVVFDKDILLWVNMLSSAQPIAIAVMAGA IQNIIAKGAKYSIWDTSKEMLYIPLDKELKTKGKAAVDIISAKVGKSSGGLIQSLLFVLFPTASYISLSPALMIIFIVVC IVWIFAVKQIYSEYKKIA
Specific function: Provides the rickettsial cell with host ATP in exchange for rickettsial ADP. This is an obligate exchange system. This energy acquiring activity is an important component of rickettsial parasitism [H]
COG id: COG3202
COG function: function code C; ATP/ADP translocase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ADP/ATP translocase tlc family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004667 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57254; Mature: 57123
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAISKIKLFFSRLVIHLWPVHRHELQKFIPTALLMFFILFNQNILRILKDSIVIPEISAE CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH ITSFIKAYCVTPTAALLVILYAYMVNNLNYEKIYRYLTLAFLSFFLCFAFWFYPKASIFH HHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE LNIEKVNELMLIYPHFKWYIALAANWSYIIFYVLSELWPNIFYALLFWQLVNEITTTEEA EEHHHHCCEEEEEECCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KRFYMLFSLFGNSSLIVVGLIVMHLASSNSILQGYFLGVSNNILLVQSSIAIMAASSICS HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEECHHHHHHHHHHHH IFLVRFIYYNAIPKTQLQHKMQHEREARPKMNLHESFKYIISSRYLWLILICTASFGFSM HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCH NLVEGIWKAQIKNLYSTTNTYAEFNGSCVVWTGVLIIFLTIIGNSVLRYHSWFVVAIITP HHHHHHHHHHHHHHHHCCCCHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIIITTGTIFFIFVVFDKDILLWVNMLSSAQPIAIAVMAGAIQNIIAKGAKYSIWDTSKE HHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCC MLYIPLDKELKTKGKAAVDIISAKVGKSSGGLIQSLLFVLFPTASYISLSPALMIIFIVV EEEEECCHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH CIVWIFAVKQIYSEYKKIA HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AISKIKLFFSRLVIHLWPVHRHELQKFIPTALLMFFILFNQNILRILKDSIVIPEISAE CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH ITSFIKAYCVTPTAALLVILYAYMVNNLNYEKIYRYLTLAFLSFFLCFAFWFYPKASIFH HHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE LNIEKVNELMLIYPHFKWYIALAANWSYIIFYVLSELWPNIFYALLFWQLVNEITTTEEA EEHHHHCCEEEEEECCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KRFYMLFSLFGNSSLIVVGLIVMHLASSNSILQGYFLGVSNNILLVQSSIAIMAASSICS HHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCEEEEECHHHHHHHHHHHH IFLVRFIYYNAIPKTQLQHKMQHEREARPKMNLHESFKYIISSRYLWLILICTASFGFSM HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCH NLVEGIWKAQIKNLYSTTNTYAEFNGSCVVWTGVLIIFLTIIGNSVLRYHSWFVVAIITP HHHHHHHHHHHHHHHHCCCCHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IIIITTGTIFFIFVVFDKDILLWVNMLSSAQPIAIAVMAGAIQNIIAKGAKYSIWDTSKE HHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCC MLYIPLDKELKTKGKAAVDIISAKVGKSSGGLIQSLLFVLFPTASYISLSPALMIIFIVV EEEEECCHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH CIVWIFAVKQIYSEYKKIA HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA