Definition Orientia tsutsugamushi Boryong, complete genome.
Accession NC_009488
Length 2,127,051

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The map label for this gene is 148284874

Identifier: 148284874

GI number: 148284874

Start: 1573374

End: 1574075

Strand: Direct

Name: 148284874

Synonym: OTBS_1617

Alternate gene names: NA

Gene position: 1573374-1574075 (Clockwise)

Preceding gene: 148284867

Following gene: 148284875

Centisome position: 73.97

GC content: 33.33

Gene sequence:

>702_bases
GTGTCTATGTCTTACTTTTTACGTAGAATTTTTTCAAGAGAAACATATAACTGTGTATCCAAAGCAGTTCAAGCTATACA
AGAAGCAAAACCTGTAGCGAATAGTGCTATAAATCATTATAGTAGCATACATAACGCTATTTATAGTTTTGAGAAAGTGA
AAGTGAATCAGTTTGCTAAAAATAGTACTGAAAATAACCCTACTCAATCTATACCAGATTTAACAAAGTATGCTGTTGAT
TTAGCAGCTCCTATTATATTACAGCGTATTACGAATGTAGAAATTGCTGCAGTAGGAGCAGCAGCATTCGAATTATATAA
ACAAGATGGCGGTAAAAAATTAGGTAAAATTTTTTCACATGGTGCTAATCTTATATGTGATGGCCTTAACCTTGTTTCAA
AAGTAGCGCAGTTTGCATTTTATGGAGGGAAAGCAGGTATCAATGCTGCTGGTGATTATATATATACAAATGAACCATTG
GATAACGAAATAGAAAAAGGATCGAATGGTGCTGAAAATTTCACAATGCGTGAGATGACAACAACAGAAGATACTGCTTT
CAGTAGCTTTATAGCAGTAGAGAAAATAATAGAAGATAATCACAATACATCAATAAGTGAAAGCATAGAAAATAATTTTT
CAATGGTGCTAGATGCTAACGATGTTCCTCTTGCAGGAAGCATGCAGGAAGTTATTGTATAA

Upstream 100 bases:

>100_bases
ATAGTACTTTTATGTATTTGTATATTGACATTGATATATATGCAATCTATATTAACTGAGTATAAATAATTGTTTATATT
TAGTTAATTAATATTAAAAG

Downstream 100 bases:

>100_bases
GCATAATAACGCCAGTTTAGGATAAGAGAAAGCAGGGAAGGCATAATACAAAAGGTATACAAAAGATAATGTGCAATTAT
AATTATGTGATATATTAAAT

Product: hypthetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MSMSYFLRRIFSRETYNCVSKAVQAIQEAKPVANSAINHYSSIHNAIYSFEKVKVNQFAKNSTENNPTQSIPDLTKYAVD
LAAPIILQRITNVEIAAVGAAAFELYKQDGGKKLGKIFSHGANLICDGLNLVSKVAQFAFYGGKAGINAAGDYIYTNEPL
DNEIEKGSNGAENFTMREMTTTEDTAFSSFIAVEKIIEDNHNTSISESIENNFSMVLDANDVPLAGSMQEVIV

Sequences:

>Translated_233_residues
MSMSYFLRRIFSRETYNCVSKAVQAIQEAKPVANSAINHYSSIHNAIYSFEKVKVNQFAKNSTENNPTQSIPDLTKYAVD
LAAPIILQRITNVEIAAVGAAAFELYKQDGGKKLGKIFSHGANLICDGLNLVSKVAQFAFYGGKAGINAAGDYIYTNEPL
DNEIEKGSNGAENFTMREMTTTEDTAFSSFIAVEKIIEDNHNTSISESIENNFSMVLDANDVPLAGSMQEVIV
>Mature_232_residues
SMSYFLRRIFSRETYNCVSKAVQAIQEAKPVANSAINHYSSIHNAIYSFEKVKVNQFAKNSTENNPTQSIPDLTKYAVDL
AAPIILQRITNVEIAAVGAAAFELYKQDGGKKLGKIFSHGANLICDGLNLVSKVAQFAFYGGKAGINAAGDYIYTNEPLD
NEIEKGSNGAENFTMREMTTTEDTAFSSFIAVEKIIEDNHNTSISESIENNFSMVLDANDVPLAGSMQEVIV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25486; Mature: 25355

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMSYFLRRIFSRETYNCVSKAVQAIQEAKPVANSAINHYSSIHNAIYSFEKVKVNQFAK
CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NSTENNPTQSIPDLTKYAVDLAAPIILQRITNVEIAAVGAAAFELYKQDGGKKLGKIFSH
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHC
GANLICDGLNLVSKVAQFAFYGGKAGINAAGDYIYTNEPLDNEIEKGSNGAENFTMREMT
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHCCCCCCCCCEEHHCC
TTEDTAFSSFIAVEKIIEDNHNTSISESIENNFSMVLDANDVPLAGSMQEVIV
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEECCCCCCCCCHHHHCC
>Mature Secondary Structure 
SMSYFLRRIFSRETYNCVSKAVQAIQEAKPVANSAINHYSSIHNAIYSFEKVKVNQFAK
CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NSTENNPTQSIPDLTKYAVDLAAPIILQRITNVEIAAVGAAAFELYKQDGGKKLGKIFSH
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHC
GANLICDGLNLVSKVAQFAFYGGKAGINAAGDYIYTNEPLDNEIEKGSNGAENFTMREMT
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHCCCCCCCCCEEHHCC
TTEDTAFSSFIAVEKIIEDNHNTSISESIENNFSMVLDANDVPLAGSMQEVIV
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEECCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA