| Definition | Orientia tsutsugamushi Boryong, complete genome. |
|---|---|
| Accession | NC_009488 |
| Length | 2,127,051 |
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The map label for this gene is dam23 [H]
Identifier: 148284867
GI number: 148284867
Start: 1555184
End: 1555990
Strand: Direct
Name: dam23 [H]
Synonym: OTBS_1602
Alternate gene names: 148284867
Gene position: 1555184-1555990 (Clockwise)
Preceding gene: 148284866
Following gene: 148284874
Centisome position: 73.11
GC content: 31.35
Gene sequence:
>807_bases GTGTCAATAGCAATTTCTAATGAACTAAAGCCTTTTCTTCACTGGGTTGGAGGTAAAAGGAGAATTGTTAATAAATTAAT AGAGCATCTTCCTTCAGGGCCATACTATAATTACTATGAACCATTCCTTGGATGTGGGGCTTTATTTTTTCAAGTTAGGC ATCTGTTTAAACAATGTTTTTTGTCTGATATTAATCTCGACTTAATTACTAGTTATCACGCTGTAAAAAAGAATCCAAAT GAGGTCAATAGATTACTAAATCTATATCACAAAAATCATTCTGAAAATTACTACTATAAAATAAGAGACAATTATTATAG TAATGATCCTAATGATATCACGGCAAAATTTATATATCTTAATAAATATTCCTTTAGGGGAATTTATAGGCTAAACAGAG ACGGCACATCCGCTCAAACATTTTCTGATAAGCGATATCTTAAGCTTCATATTTGCTCTAGAATAAATAAATGTAGTAAC CTTCTGGCTGGTGTATCAATTTGCGCTATGGATTTTTCGTTTATAGAACCTAAAAAAGGTGACTTCGTTTATCTTGATCC ACCTTATCACCAATCAGGAGAACGGTTCTACACTAGAGTCCCATTTGATGACAAAGAGCAAATCAGACTACGAGATTTTG TTTATGAACTAAACAATAAAGGTGTTAAGATTATGATCTCAAATAATAATACTGCCTTTATTAGAGACTTATACAAAGAG TTATTCATCACTCATATTGGAGTTACATACTCAATCAATGAACAGCGAAATCTCGTTAATGAGCTAATCATTACTAACTA TAATTAA
Upstream 100 bases:
>100_bases AAGATTTATAAAAAAAGCTCTGCAGCAGTTATTATTACTGGCTTTAAGGCTTATTTTCTGCTATAATTCATAGTAGAGAT TTAATTAATCAAAAATTCTT
Downstream 100 bases:
>100_bases CCAGAGCTCGATATAAAAAATAGAAAAAAAAGAATAAAGAAGGCGTATTAAAAACTACTAGATTCATAAAAAGAAACAAG TAGAACTGTTATGATGCATT
Product: site-specific DNA adenine methylase
Products: NA
Alternate protein names: M.MjaIII; Adenine-specific methyltransferase MjaIII [H]
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MSIAISNELKPFLHWVGGKRRIVNKLIEHLPSGPYYNYYEPFLGCGALFFQVRHLFKQCFLSDINLDLITSYHAVKKNPN EVNRLLNLYHKNHSENYYYKIRDNYYSNDPNDITAKFIYLNKYSFRGIYRLNRDGTSAQTFSDKRYLKLHICSRINKCSN LLAGVSICAMDFSFIEPKKGDFVYLDPPYHQSGERFYTRVPFDDKEQIRLRDFVYELNNKGVKIMISNNNTAFIRDLYKE LFITHIGVTYSINEQRNLVNELIITNYN
Sequences:
>Translated_268_residues MSIAISNELKPFLHWVGGKRRIVNKLIEHLPSGPYYNYYEPFLGCGALFFQVRHLFKQCFLSDINLDLITSYHAVKKNPN EVNRLLNLYHKNHSENYYYKIRDNYYSNDPNDITAKFIYLNKYSFRGIYRLNRDGTSAQTFSDKRYLKLHICSRINKCSN LLAGVSICAMDFSFIEPKKGDFVYLDPPYHQSGERFYTRVPFDDKEQIRLRDFVYELNNKGVKIMISNNNTAFIRDLYKE LFITHIGVTYSINEQRNLVNELIITNYN >Mature_267_residues SIAISNELKPFLHWVGGKRRIVNKLIEHLPSGPYYNYYEPFLGCGALFFQVRHLFKQCFLSDINLDLITSYHAVKKNPNE VNRLLNLYHKNHSENYYYKIRDNYYSNDPNDITAKFIYLNKYSFRGIYRLNRDGTSAQTFSDKRYLKLHICSRINKCSNL LAGVSICAMDFSFIEPKKGDFVYLDPPYHQSGERFYTRVPFDDKEQIRLRDFVYELNNKGVKIMISNNNTAFIRDLYKEL FITHIGVTYSINEQRNLVNELIITNYN
Specific function: This methylase recognizes the double-stranded sequence GATC, causes specific methylation on A-2 on both strands, and protects the DNA from cleavage by the MjaIII endonuclease (Potential) [H]
COG id: COG0338
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1789789, Length=270, Percent_Identity=29.6296296296296, Blast_Score=84, Evalue=7e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023095 - InterPro: IPR002052 - InterPro: IPR012327 [H]
Pfam domain/function: PF02086 MethyltransfD12 [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 31734; Mature: 31602
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIAISNELKPFLHWVGGKRRIVNKLIEHLPSGPYYNYYEPFLGCGALFFQVRHLFKQCF CEEEECCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LSDINLDLITSYHAVKKNPNEVNRLLNLYHKNHSENYYYKIRDNYYSNDPNDITAKFIYL HCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEEEE NKYSFRGIYRLNRDGTSAQTFSDKRYLKLHICSRINKCSNLLAGVSICAMDFSFIEPKKG EEECCCEEEEECCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DFVYLDPPYHQSGERFYTRVPFDDKEQIRLRDFVYELNNKGVKIMISNNNTAFIRDLYKE CEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHH LFITHIGVTYSINEQRNLVNELIITNYN HHHHHCCEEEEECHHHHHHHHHHEECCC >Mature Secondary Structure SIAISNELKPFLHWVGGKRRIVNKLIEHLPSGPYYNYYEPFLGCGALFFQVRHLFKQCF EEEECCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LSDINLDLITSYHAVKKNPNEVNRLLNLYHKNHSENYYYKIRDNYYSNDPNDITAKFIYL HCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEEEEEE NKYSFRGIYRLNRDGTSAQTFSDKRYLKLHICSRINKCSNLLAGVSICAMDFSFIEPKKG EEECCCEEEEECCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DFVYLDPPYHQSGERFYTRVPFDDKEQIRLRDFVYELNNKGVKIMISNNNTAFIRDLYKE CEEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHH LFITHIGVTYSINEQRNLVNELIITNYN HHHHHCCEEEEECHHHHHHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]