Definition Orientia tsutsugamushi Boryong, complete genome.
Accession NC_009488
Length 2,127,051

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The map label for this gene is 148284788

Identifier: 148284788

GI number: 148284788

Start: 1417306

End: 1419174

Strand: Direct

Name: 148284788

Synonym: OTBS_1456

Alternate gene names: NA

Gene position: 1417306-1419174 (Clockwise)

Preceding gene: 148284785

Following gene: 148284801

Centisome position: 66.63

GC content: 31.14

Gene sequence:

>1869_bases
ATGGCAAATTTTATCCTTGAGTATATAGAAAATGCTCATACAAATATAGAAGCTAAAATTGAACAACAGGAATATGTCCA
GCGAAAGTTGTTCATTATGACTCAAACCATAAAAACATCAGACTTTAATATAAAATATGCAATTGCGTACTTAACGCCGT
ATGATCAGCAACTTGTAAAACAAAAATTAATAACCAAATTAACTCCACTGTTTAAGGAATATTTTACAAAGTATGGTTGC
GTTGAAGAAGTAAGCGAAAGAATGGCTGAATGGCTTATAAATCAAGAATCACAGTCTGATAAACCAAAGCTTATAGCATC
AAATTTTGCCAACTTTTTTAACGATAATAAATTACAAAAGACTATTAAAAATAATATAACAAAGCTAACAACAGATACTC
AGAATCTGTATAAAGGAATTTTTTGCTTAAAAGTTTTGTCACATATAACACAATCTTCACTACAAAATATAACTTCAGGC
GCAATCGATATTTTAAAAACAGAATTAACACAGCGATTTGAAGAAGAATACTTGGTTGAATGTTTTATAGAATGTATAAA
ACCATTTATACACAAATTTGCATGTTTTTTTATTATGCGCACTGAAGGAGATGGACATATTGATATGGCAGATGAGTTCT
CAGATGTTAATAGTTGTATAGAAGATATTTACAATTTCAAGTTTGATGAATCAGGCAAAAATGCAGTTACAAAAATGAAA
TCTGAAATAAATCATCTTATAGAACTAAATCATCTAAATAAGAATTTTTTTACAAGCTTAAGTAGTAAAATGGTTACATT
TATAGAAAAACATAAAACACAACAGCCTAATTTCATTGCCATGAAAACAGACATTGAGACTGAAAATGGAAAAAGCAACA
GTGACATTCAGTCAATACAATCTGATCAATATTGTGACTTGAGTTATATGGAAGCTGAAACTGAAATTGATACTGAAAGT
GAAACTGAAAATGGAAAAAGTAACACTGACATTCAGTTAATGCAATCTGATCAATATTATGATTTGAGTTACATGGAAGC
TGAAACTGAAATTGATACTGAAAGTGAAATTGAAAGTGAAAATGGAAAAAGCAATAGTGACATTCAGTCAATACAATCTG
ATTTATATTATGACCTAACTGATATAGAAGATCAAATAGAAGTTGACCTGCGAGATGCTGGATTGCTATCTGAAGACAAT
CTACCTCAATCTGAAAAATTGTCTGAAAACATTACAGAGCAGCTTAGATTGATACTTGAAAACCAACAACACGACTTAAC
TAATAGTAATATTGACAGCGACAATGAGATTATGTTAACAGAAGCTGCAGACTTAGTAATAGACGGACGGGTATTGAAAG
ATATTCCTCAACCTGCAAAATTTTCTGAAAACATTACAGAGCAGATTAGATTGACATCTGAAAACCAACAACATGACTTA
ACTAATAGTAATATTGACAGCAACAATGAGTTTCTGGTAAGAGAAGCTGAAGACTTGGTAATAGACGTATGGGTATTGGA
AGATATTCCTCAATCTGAAAAATGGCCTGAAAACATTACAGAGCTGATTAGATTGACATCTGAAAACCAACAACATGACT
TAACTAATAGTAATATTGACAGCGACAATGAGTTTCTGGTAACAGAAGATCAAGACTTGGTAATAGACGTATGGGTATTG
GAAGATATTCCTCAACCTGCAAAATTTCCTGAAAACATTACAGAGCTGATTAGATTGACACCTGAAAACCAACAACATGA
CTTAACTAATAGTAATATTGACAGCTACAATGAGATTATGTTAACAGAAGCTGAAGAATTGGTATTTGAAAAGCTTCCTA
ACCATAATGAAATACCTGACTGGATATAA

Upstream 100 bases:

>100_bases
TAAATCAGATCCTAATCTTAACATTTCTTAACTTTTTAGTTGCGTTTTTTAATTATTCATAATATATATAAAAAAACTTT
AAACTATAAGGTAACGATAT

Downstream 100 bases:

>100_bases
ACTGCTTTTTATTAAGTAAAGATGAAACTAAAATGCTATACCGCATGTAGATCAGCCTGAAGAGTAGTCACTTATTGCGC
TATGTTATCAGCACAGCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 622; Mature: 621

Protein sequence:

>622_residues
MANFILEYIENAHTNIEAKIEQQEYVQRKLFIMTQTIKTSDFNIKYAIAYLTPYDQQLVKQKLITKLTPLFKEYFTKYGC
VEEVSERMAEWLINQESQSDKPKLIASNFANFFNDNKLQKTIKNNITKLTTDTQNLYKGIFCLKVLSHITQSSLQNITSG
AIDILKTELTQRFEEEYLVECFIECIKPFIHKFACFFIMRTEGDGHIDMADEFSDVNSCIEDIYNFKFDESGKNAVTKMK
SEINHLIELNHLNKNFFTSLSSKMVTFIEKHKTQQPNFIAMKTDIETENGKSNSDIQSIQSDQYCDLSYMEAETEIDTES
ETENGKSNTDIQLMQSDQYYDLSYMEAETEIDTESEIESENGKSNSDIQSIQSDLYYDLTDIEDQIEVDLRDAGLLSEDN
LPQSEKLSENITEQLRLILENQQHDLTNSNIDSDNEIMLTEAADLVIDGRVLKDIPQPAKFSENITEQIRLTSENQQHDL
TNSNIDSNNEFLVREAEDLVIDVWVLEDIPQSEKWPENITELIRLTSENQQHDLTNSNIDSDNEFLVTEDQDLVIDVWVL
EDIPQPAKFPENITELIRLTPENQQHDLTNSNIDSYNEIMLTEAEELVFEKLPNHNEIPDWI

Sequences:

>Translated_622_residues
MANFILEYIENAHTNIEAKIEQQEYVQRKLFIMTQTIKTSDFNIKYAIAYLTPYDQQLVKQKLITKLTPLFKEYFTKYGC
VEEVSERMAEWLINQESQSDKPKLIASNFANFFNDNKLQKTIKNNITKLTTDTQNLYKGIFCLKVLSHITQSSLQNITSG
AIDILKTELTQRFEEEYLVECFIECIKPFIHKFACFFIMRTEGDGHIDMADEFSDVNSCIEDIYNFKFDESGKNAVTKMK
SEINHLIELNHLNKNFFTSLSSKMVTFIEKHKTQQPNFIAMKTDIETENGKSNSDIQSIQSDQYCDLSYMEAETEIDTES
ETENGKSNTDIQLMQSDQYYDLSYMEAETEIDTESEIESENGKSNSDIQSIQSDLYYDLTDIEDQIEVDLRDAGLLSEDN
LPQSEKLSENITEQLRLILENQQHDLTNSNIDSDNEIMLTEAADLVIDGRVLKDIPQPAKFSENITEQIRLTSENQQHDL
TNSNIDSNNEFLVREAEDLVIDVWVLEDIPQSEKWPENITELIRLTSENQQHDLTNSNIDSDNEFLVTEDQDLVIDVWVL
EDIPQPAKFPENITELIRLTPENQQHDLTNSNIDSYNEIMLTEAEELVFEKLPNHNEIPDWI
>Mature_621_residues
ANFILEYIENAHTNIEAKIEQQEYVQRKLFIMTQTIKTSDFNIKYAIAYLTPYDQQLVKQKLITKLTPLFKEYFTKYGCV
EEVSERMAEWLINQESQSDKPKLIASNFANFFNDNKLQKTIKNNITKLTTDTQNLYKGIFCLKVLSHITQSSLQNITSGA
IDILKTELTQRFEEEYLVECFIECIKPFIHKFACFFIMRTEGDGHIDMADEFSDVNSCIEDIYNFKFDESGKNAVTKMKS
EINHLIELNHLNKNFFTSLSSKMVTFIEKHKTQQPNFIAMKTDIETENGKSNSDIQSIQSDQYCDLSYMEAETEIDTESE
TENGKSNTDIQLMQSDQYYDLSYMEAETEIDTESEIESENGKSNSDIQSIQSDLYYDLTDIEDQIEVDLRDAGLLSEDNL
PQSEKLSENITEQLRLILENQQHDLTNSNIDSDNEIMLTEAADLVIDGRVLKDIPQPAKFSENITEQIRLTSENQQHDLT
NSNIDSNNEFLVREAEDLVIDVWVLEDIPQSEKWPENITELIRLTSENQQHDLTNSNIDSDNEFLVTEDQDLVIDVWVLE
DIPQPAKFPENITELIRLTPENQQHDLTNSNIDSYNEIMLTEAEELVFEKLPNHNEIPDWI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72124; Mature: 71993

Theoretical pI: Translated: 4.03; Mature: 4.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANFILEYIENAHTNIEAKIEQQEYVQRKLFIMTQTIKTSDFNIKYAIAYLTPYDQQLVK
CHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHEEEEECCCCCEEEEEEEECCCHHHHHH
QKLITKLTPLFKEYFTKYGCVEEVSERMAEWLINQESQSDKPKLIASNFANFFNDNKLQK
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHH
TIKNNITKLTTDTQNLYKGIFCLKVLSHITQSSLQNITSGAIDILKTELTQRFEEEYLVE
HHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CFIECIKPFIHKFACFFIMRTEGDGHIDMADEFSDVNSCIEDIYNFKFDESGKNAVTKMK
HHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
SEINHLIELNHLNKNFFTSLSSKMVTFIEKHKTQQPNFIAMKTDIETENGKSNSDIQSIQ
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHC
SDQYCDLSYMEAETEIDTESETENGKSNTDIQLMQSDQYYDLSYMEAETEIDTESEIESE
CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCHHHHHCC
NGKSNSDIQSIQSDLYYDLTDIEDQIEVDLRDAGLLSEDNLPQSEKLSENITEQLRLILE
CCCCCHHHHHHHHHHCCCCCCCCCHHEEEHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
NQQHDLTNSNIDSDNEIMLTEAADLVIDGRVLKDIPQPAKFSENITEQIRLTSENQQHDL
CCCCCCCCCCCCCCCCEEEEECCCCEECCHHHHHCCCCCHHHHHHHHHHEECCCCCCCCC
TNSNIDSNNEFLVREAEDLVIDVWVLEDIPQSEKWPENITELIRLTSENQQHDLTNSNID
CCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
SDNEFLVTEDQDLVIDVWVLEDIPQPAKFPENITELIRLTPENQQHDLTNSNIDSYNEIM
CCCCEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH
LTEAEELVFEKLPNHNEIPDWI
HHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
ANFILEYIENAHTNIEAKIEQQEYVQRKLFIMTQTIKTSDFNIKYAIAYLTPYDQQLVK
HHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHEEEEECCCCCEEEEEEEECCCHHHHHH
QKLITKLTPLFKEYFTKYGCVEEVSERMAEWLINQESQSDKPKLIASNFANFFNDNKLQK
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHH
TIKNNITKLTTDTQNLYKGIFCLKVLSHITQSSLQNITSGAIDILKTELTQRFEEEYLVE
HHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CFIECIKPFIHKFACFFIMRTEGDGHIDMADEFSDVNSCIEDIYNFKFDESGKNAVTKMK
HHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
SEINHLIELNHLNKNFFTSLSSKMVTFIEKHKTQQPNFIAMKTDIETENGKSNSDIQSIQ
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHC
SDQYCDLSYMEAETEIDTESETENGKSNTDIQLMQSDQYYDLSYMEAETEIDTESEIESE
CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCHHHHHCC
NGKSNSDIQSIQSDLYYDLTDIEDQIEVDLRDAGLLSEDNLPQSEKLSENITEQLRLILE
CCCCCHHHHHHHHHHCCCCCCCCCHHEEEHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
NQQHDLTNSNIDSDNEIMLTEAADLVIDGRVLKDIPQPAKFSENITEQIRLTSENQQHDL
CCCCCCCCCCCCCCCCEEEEECCCCEECCHHHHHCCCCCHHHHHHHHHHEECCCCCCCCC
TNSNIDSNNEFLVREAEDLVIDVWVLEDIPQSEKWPENITELIRLTSENQQHDLTNSNID
CCCCCCCCCCEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
SDNEFLVTEDQDLVIDVWVLEDIPQPAKFPENITELIRLTPENQQHDLTNSNIDSYNEIM
CCCCEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHH
LTEAEELVFEKLPNHNEIPDWI
HHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA