Click here to switch to the map view.

The map label for this gene is gatC [H]

Identifier: 148284745

GI number: 148284745

Start: 1327651

End: 1327950

Strand: Direct

Name: gatC [H]

Synonym: OTBS_1366

Alternate gene names: 148284745

Gene position: 1327651-1327950 (Clockwise)

Preceding gene: 148284744

Following gene: 148284746

Centisome position: 62.42

GC content: 32.33

Gene sequence:

>300_bases
ATGATATCTATAAATGAAGTACAATTAATTGCTAGTTACTGCAAGTTGAGGTTTAATAACCAAGAACTAAATCATATGGT
TAACCAACTATCCAGTATAGTGGAAATGATGAACAAGCTGGAAAAAATTGATTGTACGGGTGTCCCCCCTATGAGGCACT
TTGAAGAAAATAACAGAATGCGAAAAGATCAAGTTGAGCAGAATATTACAGTGGATCAGTTATTATCTAATGTACCACAG
TCATCAGCAACTATAGCTAAAAACACAAAATATTTTGTTGTACCAAAGATAATAGAATAA

Upstream 100 bases:

>100_bases
TATCAACAAAAAAATTAGCAAATAACGCGTAATTACTAACATTGACTTAGCTGAATTGTTCAGATATATTACCATTATTC
CATAGTACAATTAGTGAATT

Downstream 100 bases:

>100_bases
TGAACAATCTAGTAAAATTAACAATTTCTCAAGCAGTTAGTGGGCTAAAAAATAAAGAGTTTACTGCTACTGATCTAGTA
ACTGCGCATATCAACCAAAT

Product: glutamyl-tRNA(Gln) amidotransferase subunit C

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C [H]

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MISINEVQLIASYCKLRFNNQELNHMVNQLSSIVEMMNKLEKIDCTGVPPMRHFEENNRMRKDQVEQNITVDQLLSNVPQ
SSATIAKNTKYFVVPKIIE

Sequences:

>Translated_99_residues
MISINEVQLIASYCKLRFNNQELNHMVNQLSSIVEMMNKLEKIDCTGVPPMRHFEENNRMRKDQVEQNITVDQLLSNVPQ
SSATIAKNTKYFVVPKIIE
>Mature_99_residues
MISINEVQLIASYCKLRFNNQELNHMVNQLSSIVEMMNKLEKIDCTGVPPMRHFEENNRMRKDQVEQNITVDQLLSNVPQ
SSATIAKNTKYFVVPKIIE

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003837 [H]

Pfam domain/function: PF02686 Glu-tRNAGln [H]

EC number: 6.3.5.-

Molecular weight: Translated: 11482; Mature: 11482

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISINEVQLIASYCKLRFNNQELNHMVNQLSSIVEMMNKLEKIDCTGVPPMRHFEENNRM
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCC
RKDQVEQNITVDQLLSNVPQSSATIAKNTKYFVVPKIIE
CHHHHHHCCCHHHHHHHCCCCCCHHHCCCCEEECCCCCC
>Mature Secondary Structure
MISINEVQLIASYCKLRFNNQELNHMVNQLSSIVEMMNKLEKIDCTGVPPMRHFEENNRM
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCC
RKDQVEQNITVDQLLSNVPQSSATIAKNTKYFVVPKIIE
CHHHHHHCCCHHHHHHHCCCCCCHHHCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA