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The map label for this gene is 148284744

Identifier: 148284744

GI number: 148284744

Start: 1325832

End: 1327568

Strand: Direct

Name: 148284744

Synonym: OTBS_1365

Alternate gene names: NA

Gene position: 1325832-1327568 (Clockwise)

Preceding gene: 148284743

Following gene: 148284745

Centisome position: 62.33

GC content: 31.89

Gene sequence:

>1737_bases
ATGTCAAATAATCTAGATCAAAGTAATAATGAATCAATAAATTCATTAATTCAAACAGATAAATTAGTGTTTATTCCAAT
TGGTGGATGCAACGAAATAGGTATGAATGTCAATATCTATCATTACCAAGGAGAATTTATAATGGTAGATTGTGGTGCAG
GCTTTCCTAGTGATTTTACACCTGGAGCTAACATGTTAATAACAGACCTAAGCTTCATCAAAGCTAGCGGAAAAAAATTA
GCTGGGTTGATACTAACACATGCTCATGAAGATCATTTAGGAGGAGTTCAGTACCTTCTTCAAGATCTGGATTGCCCTAT
CTATACTACTAACTTTACAGCTAATTTTTTGTCACTTAGATTAAAAGAGTATGACCCAACTTGTCAAGTTACTATTAATA
AGATTACTCCTGGTCATAGATTTAATATTGGGCCATTTGCCATTGAGATGTTAACTCTAACTCATTCCGCACCAGAAATG
CAAGCATTAATGATTAGAACTGATGCTGGTACTATTTTACATACTGGAGACTGGAAATTTGATGATGATCCTATTATTGG
CAAAGAATCTGATAAAGCTTTATTGCAAAAATACGGAGATGAAGGAATAACAGCGCTAGTGTGTGATTCTACTAATGTAT
TTTATAGCGGTTTTTCAGGATCAGAAGGTAATCTGCAAAAAAGTTTAATTGATATTATTGGCAGTGCATCAGGATTAATA
ATTACTACAACATTTGCTTCAAATTTAGCTAGATTGCAGTCATTAATTGTTGCTGCTAAGCATGCTGGTCGTAAAGTTAT
ACTTGCAGGAAAAAGTTTGCTACGGATGATGCGTGCTGCACAAGATAGTGACTATCTGAATGATGTGAACGAGCAATTAT
TAGACATCAAAGAATTTAGTAAATATCCACGTGAAAAATTAATGATTATCTCAACAGGGTGCCAAGGTGAGCCGTTAGCA
GCAGTTAATAAGATAGTAACTGGAAGTCATCAACATATTAAACTACAGGCTAAAGATACAGTTATCTTTTCATCAAAAAT
TATTCCTGGTAATGAAAAAAGAATATACAAACTATTTAACCAGTTAACTAGAGCACAAGTTAAAGTTATTACTGAAAAAG
ATAATTTTGTACATGTATCAGGGCATCCTGCAATTGAAGAACTGAAAGCTATGTATAAGCTAACACGACCTAAAATATGT
ATACCAGTACATGGAGAGCCAATACATATACATGAACATGCTAATTTAGCCAAAAGTTGTGGAATTAAGAATGTTGTTGA
ACTAGAAAATGGTTCCATTCTACAAATTAACTCAGACTCACATAAAATTTTGGGAAAAATAAAAGTGCAATATCTAGCAA
TAGATGGCAATTATATACTTTCAGCGAATTCTGATATTTTTTATAAGCGTAGAAGAATGCAAGAAAATGGTATTGTTATT
GCTACTTTGATTTTTAACAATAGAAATATTTTAGCTATTGAGCCAATATTATCATTTCCTGGTCTTCTAGATCCTAATCC
TAAAAATGAACATGATCCTGATTACTCTATTGCTACACTAATCAAGCAAGAGCTTCAGCAAATATTATCAATTAATAACA
GCACTAAAAGATCCATTAAACGAGATAAAATTGAAGAAGTTACAAAAAGCTGTATAAGGCGTATTATTAAACAAGAAGTT
AATAAGAACCCAATAATTATGGTCAATATCCATAAATTATATCAACAAAAAAATTAG

Upstream 100 bases:

>100_bases
TTTTTAGATAATAATATTTGCTCTTAATGCTATAATCAAAAATGTTCTTAACAAAAAAATTATTACTACCTATTTTTAGT
TCAATAAACTCAATTCTATA

Downstream 100 bases:

>100_bases
CAAATAACGCGTAATTACTAACATTGACTTAGCTGAATTGTTCAGATATATTACCATTATTCCATAGTACAATTAGTGAA
TTATGATATCTATAAATGAA

Product: metallo-beta-lactamase family protein

Products: NA

Alternate protein names: RNase J [H]

Number of amino acids: Translated: 578; Mature: 577

Protein sequence:

>578_residues
MSNNLDQSNNESINSLIQTDKLVFIPIGGCNEIGMNVNIYHYQGEFIMVDCGAGFPSDFTPGANMLITDLSFIKASGKKL
AGLILTHAHEDHLGGVQYLLQDLDCPIYTTNFTANFLSLRLKEYDPTCQVTINKITPGHRFNIGPFAIEMLTLTHSAPEM
QALMIRTDAGTILHTGDWKFDDDPIIGKESDKALLQKYGDEGITALVCDSTNVFYSGFSGSEGNLQKSLIDIIGSASGLI
ITTTFASNLARLQSLIVAAKHAGRKVILAGKSLLRMMRAAQDSDYLNDVNEQLLDIKEFSKYPREKLMIISTGCQGEPLA
AVNKIVTGSHQHIKLQAKDTVIFSSKIIPGNEKRIYKLFNQLTRAQVKVITEKDNFVHVSGHPAIEELKAMYKLTRPKIC
IPVHGEPIHIHEHANLAKSCGIKNVVELENGSILQINSDSHKILGKIKVQYLAIDGNYILSANSDIFYKRRRMQENGIVI
ATLIFNNRNILAIEPILSFPGLLDPNPKNEHDPDYSIATLIKQELQQILSINNSTKRSIKRDKIEEVTKSCIRRIIKQEV
NKNPIIMVNIHKLYQQKN

Sequences:

>Translated_578_residues
MSNNLDQSNNESINSLIQTDKLVFIPIGGCNEIGMNVNIYHYQGEFIMVDCGAGFPSDFTPGANMLITDLSFIKASGKKL
AGLILTHAHEDHLGGVQYLLQDLDCPIYTTNFTANFLSLRLKEYDPTCQVTINKITPGHRFNIGPFAIEMLTLTHSAPEM
QALMIRTDAGTILHTGDWKFDDDPIIGKESDKALLQKYGDEGITALVCDSTNVFYSGFSGSEGNLQKSLIDIIGSASGLI
ITTTFASNLARLQSLIVAAKHAGRKVILAGKSLLRMMRAAQDSDYLNDVNEQLLDIKEFSKYPREKLMIISTGCQGEPLA
AVNKIVTGSHQHIKLQAKDTVIFSSKIIPGNEKRIYKLFNQLTRAQVKVITEKDNFVHVSGHPAIEELKAMYKLTRPKIC
IPVHGEPIHIHEHANLAKSCGIKNVVELENGSILQINSDSHKILGKIKVQYLAIDGNYILSANSDIFYKRRRMQENGIVI
ATLIFNNRNILAIEPILSFPGLLDPNPKNEHDPDYSIATLIKQELQQILSINNSTKRSIKRDKIEEVTKSCIRRIIKQEV
NKNPIIMVNIHKLYQQKN
>Mature_577_residues
SNNLDQSNNESINSLIQTDKLVFIPIGGCNEIGMNVNIYHYQGEFIMVDCGAGFPSDFTPGANMLITDLSFIKASGKKLA
GLILTHAHEDHLGGVQYLLQDLDCPIYTTNFTANFLSLRLKEYDPTCQVTINKITPGHRFNIGPFAIEMLTLTHSAPEMQ
ALMIRTDAGTILHTGDWKFDDDPIIGKESDKALLQKYGDEGITALVCDSTNVFYSGFSGSEGNLQKSLIDIIGSASGLII
TTTFASNLARLQSLIVAAKHAGRKVILAGKSLLRMMRAAQDSDYLNDVNEQLLDIKEFSKYPREKLMIISTGCQGEPLAA
VNKIVTGSHQHIKLQAKDTVIFSSKIIPGNEKRIYKLFNQLTRAQVKVITEKDNFVHVSGHPAIEELKAMYKLTRPKICI
PVHGEPIHIHEHANLAKSCGIKNVVELENGSILQINSDSHKILGKIKVQYLAIDGNYILSANSDIFYKRRRMQENGIVIA
TLIFNNRNILAIEPILSFPGLLDPNPKNEHDPDYSIATLIKQELQQILSINNSTKRSIKRDKIEEVTKSCIRRIIKQEVN
KNPIIMVNIHKLYQQKN

Specific function: Unknown

COG id: COG0595

COG function: function code R; Predicted hydrolase of the metallo-beta-lactamase superfamily

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. RNA-metabolizing metallo-beta-lactamase-like family. RNase J subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR011108
- InterPro:   IPR001587 [H]

Pfam domain/function: PF00753 Lactamase_B; PF07521 RMMBL [H]

EC number: NA

Molecular weight: Translated: 64417; Mature: 64286

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNNLDQSNNESINSLIQTDKLVFIPIGGCNEIGMNVNIYHYQGEFIMVDCGAGFPSDFT
CCCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCEEEEEEEECCEEEEECCCCCCCCCC
PGANMLITDLSFIKASGKKLAGLILTHAHEDHLGGVQYLLQDLDCPIYTTNFTANFLSLR
CCCCEEEEHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCEEEECCCEEEEEEE
LKEYDPTCQVTINKITPGHRFNIGPFAIEMLTLTHSAPEMQALMIRTDAGTILHTGDWKF
EECCCCCEEEEEEECCCCCCCCCCHHEEEEEEEECCCCCEEEEEEEECCCCEEECCCCCC
DDDPIIGKESDKALLQKYGDEGITALVCDSTNVFYSGFSGSEGNLQKSLIDIIGSASGLI
CCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCEEEECCCCCCCCHHHHHHHHHCCCCCEE
ITTTFASNLARLQSLIVAAKHAGRKVILAGKSLLRMMRAAQDSDYLNDVNEQLLDIKEFS
EEEHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
KYPREKLMIISTGCQGEPLAAVNKIVTGSHQHIKLQAKDTVIFSSKIIPGNEKRIYKLFN
HCCCCEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEECCEEEEEEEECCCCHHHHHHHHH
QLTRAQVKVITEKDNFVHVSGHPAIEELKAMYKLTRPKICIPVHGEPIHIHEHANLAKSC
HHHHEEEEEEEECCCEEEECCCCHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCHHHHC
GIKNVVELENGSILQINSDSHKILGKIKVQYLAIDGNYILSANSDIFYKRRRMQENGIVI
CCCCEEEECCCCEEEECCCCCEEEEEEEEEEEEEECCEEEECCCCHHHHHHHHCCCCEEE
ATLIFNNRNILAIEPILSFPGLLDPNPKNEHDPDYSIATLIKQELQQILSINNSTKRSIK
EEEEECCCCEEEEECHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH
RDKIEEVTKSCIRRIIKQEVNKNPIIMVNIHKLYQQKN
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHCCCC
>Mature Secondary Structure 
SNNLDQSNNESINSLIQTDKLVFIPIGGCNEIGMNVNIYHYQGEFIMVDCGAGFPSDFT
CCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCEEEEEEEECCEEEEECCCCCCCCCC
PGANMLITDLSFIKASGKKLAGLILTHAHEDHLGGVQYLLQDLDCPIYTTNFTANFLSLR
CCCCEEEEHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCEEEECCCEEEEEEE
LKEYDPTCQVTINKITPGHRFNIGPFAIEMLTLTHSAPEMQALMIRTDAGTILHTGDWKF
EECCCCCEEEEEEECCCCCCCCCCHHEEEEEEEECCCCCEEEEEEEECCCCEEECCCCCC
DDDPIIGKESDKALLQKYGDEGITALVCDSTNVFYSGFSGSEGNLQKSLIDIIGSASGLI
CCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCEEEECCCCCCCCHHHHHHHHHCCCCCEE
ITTTFASNLARLQSLIVAAKHAGRKVILAGKSLLRMMRAAQDSDYLNDVNEQLLDIKEFS
EEEHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
KYPREKLMIISTGCQGEPLAAVNKIVTGSHQHIKLQAKDTVIFSSKIIPGNEKRIYKLFN
HCCCCEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEECCEEEEEEEECCCCHHHHHHHHH
QLTRAQVKVITEKDNFVHVSGHPAIEELKAMYKLTRPKICIPVHGEPIHIHEHANLAKSC
HHHHEEEEEEEECCCEEEECCCCHHHHHHHHHHHCCCCEEEEECCCEEEEECCCCHHHHC
GIKNVVELENGSILQINSDSHKILGKIKVQYLAIDGNYILSANSDIFYKRRRMQENGIVI
CCCCEEEECCCCEEEECCCCCEEEEEEEEEEEEEECCEEEECCCCHHHHHHHHCCCCEEE
ATLIFNNRNILAIEPILSFPGLLDPNPKNEHDPDYSIATLIKQELQQILSINNSTKRSIK
EEEEECCCCEEEEECHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH
RDKIEEVTKSCIRRIIKQEVNKNPIIMVNIHKLYQQKN
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12948626 [H]