| Definition | Orientia tsutsugamushi Boryong, complete genome. |
|---|---|
| Accession | NC_009488 |
| Length | 2,127,051 |
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The map label for this gene is rhp9
Identifier: 148284736
GI number: 148284736
Start: 1306423
End: 1306713
Strand: Direct
Name: rhp9
Synonym: OTBS_1342
Alternate gene names: NA
Gene position: 1306423-1306713 (Clockwise)
Preceding gene: 148284735
Following gene: 148284743
Centisome position: 61.42
GC content: 30.24
Gene sequence:
>291_bases TTGAAAAGTTACGGATACACAGTACATAGAATTCCATATTGGATTTGGGATAAGTTAAGAACAGATACTGACCAAGGACA ATATATATGTAAATTGATATGTAATGATAAATCTGCTTCTAAATCAGATATGTTAGAGGAAATATTCTATGATGCACAGG AGAATATACCAGAGCAATCAACAAGTGAATTTCTACCTCATTCTGAATTATCGATATCAGAAGATGTATTTTATGATGCA TACGAATATATTCTACCAGATTCATTAACACATGAATCTTTATCTCATTAG
Upstream 100 bases:
>100_bases CTTTATTAAAGAGGAAAATACAGTAATCCAAGTAGATGGGCCAAGTCATTTTAACGACAATAATGCTCCTAACGTTTCGA CTAGGCTGAATACTGAATTA
Downstream 100 bases:
>100_bases ACTTCTTTCGAAACTATACAATGATGTAAAATGGTGTTATAAAAATCTGATTTGAAGTAATAATGAAATTAGATCAGATT AAAGAGTTAAAGGATGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MKSYGYTVHRIPYWIWDKLRTDTDQGQYICKLICNDKSASKSDMLEEIFYDAQENIPEQSTSEFLPHSELSISEDVFYDA YEYILPDSLTHESLSH
Sequences:
>Translated_96_residues MKSYGYTVHRIPYWIWDKLRTDTDQGQYICKLICNDKSASKSDMLEEIFYDAQENIPEQSTSEFLPHSELSISEDVFYDA YEYILPDSLTHESLSH >Mature_96_residues MKSYGYTVHRIPYWIWDKLRTDTDQGQYICKLICNDKSASKSDMLEEIFYDAQENIPEQSTSEFLPHSELSISEDVFYDA YEYILPDSLTHESLSH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11322; Mature: 11322
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSYGYTVHRIPYWIWDKLRTDTDQGQYICKLICNDKSASKSDMLEEIFYDAQENIPEQS CCCCCCCHHHHHHHHHHHHHCCCCCCCEEHHHEECCCCCCHHHHHHHHHHHHHHCCCCCC TSEFLPHSELSISEDVFYDAYEYILPDSLTHESLSH HHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MKSYGYTVHRIPYWIWDKLRTDTDQGQYICKLICNDKSASKSDMLEEIFYDAQENIPEQS CCCCCCCHHHHHHHHHHHHHCCCCCCCEEHHHEECCCCCCHHHHHHHHHHHHHHCCCCCC TSEFLPHSELSISEDVFYDAYEYILPDSLTHESLSH HHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA