| Definition | Orientia tsutsugamushi Boryong, complete genome. |
|---|---|
| Accession | NC_009488 |
| Length | 2,127,051 |
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The map label for this gene is rhp9
Identifier: 148284735
GI number: 148284735
Start: 1304309
End: 1304725
Strand: Direct
Name: rhp9
Synonym: OTBS_1340
Alternate gene names: NA
Gene position: 1304309-1304725 (Clockwise)
Preceding gene: 148284725
Following gene: 148284736
Centisome position: 61.32
GC content: 32.13
Gene sequence:
>417_bases ATGCGTTGCAGAAGCACTACGCAACTTAATATCCAAGCAATGGACAGCATTAAACTATGTCGTATGCTTAAAGATAGAAA GATATTATCTGAAACTATTATAACAGAGATTTTAAATAGAGCTTTGTTTTTACTACAAACTGAAGATACAAGATACAATA GACTGCAGTTTGATGCCAGAGGTTTAGCAACAATTGTATACCAATTGGCAAAATTAGACTATGGTATAAGTACTGAATTT CTTCATGCTTGGACAAATAAAGCTATAAATCTAATTGAGGATTTTATACCTCAAGGGTTAGCTAATTCCATATGGGCATT TGGACATTTAGGAATAAAACCATCAGCTCAATTCATTAGACCTTTTTCGAAACTGGTTAAGGTAGTTCAAAATTATAAAT GCCAGAGATCAAATTAA
Upstream 100 bases:
>100_bases AGAATAGTGTGATATATAGTACTCAATTAATGCATATTATAACCTTTCTAAAAAGCAACGCTTAGTATTGCAAAGCTAAA TTATATAAGGAGCCTAGAAC
Downstream 100 bases:
>100_bases ATCTAAGACCGAATCTTTTACCTCTATTTCGATATTTGTCAGCAATAATTTTGAACCGTTTTAGCATAGCAATAACGTTT TCATTGACAACTCTTTTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MRCRSTTQLNIQAMDSIKLCRMLKDRKILSETIITEILNRALFLLQTEDTRYNRLQFDARGLATIVYQLAKLDYGISTEF LHAWTNKAINLIEDFIPQGLANSIWAFGHLGIKPSAQFIRPFSKLVKVVQNYKCQRSN
Sequences:
>Translated_138_residues MRCRSTTQLNIQAMDSIKLCRMLKDRKILSETIITEILNRALFLLQTEDTRYNRLQFDARGLATIVYQLAKLDYGISTEF LHAWTNKAINLIEDFIPQGLANSIWAFGHLGIKPSAQFIRPFSKLVKVVQNYKCQRSN >Mature_138_residues MRCRSTTQLNIQAMDSIKLCRMLKDRKILSETIITEILNRALFLLQTEDTRYNRLQFDARGLATIVYQLAKLDYGISTEF LHAWTNKAINLIEDFIPQGLANSIWAFGHLGIKPSAQFIRPFSKLVKVVQNYKCQRSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15967; Mature: 15967
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRCRSTTQLNIQAMDSIKLCRMLKDRKILSETIITEILNRALFLLQTEDTRYNRLQFDAR CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH GLATIVYQLAKLDYGISTEFLHAWTNKAINLIEDFIPQGLANSIWAFGHLGIKPSAQFIR HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHH PFSKLVKVVQNYKCQRSN HHHHHHHHHHCCCCCCCC >Mature Secondary Structure MRCRSTTQLNIQAMDSIKLCRMLKDRKILSETIITEILNRALFLLQTEDTRYNRLQFDAR CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH GLATIVYQLAKLDYGISTEFLHAWTNKAINLIEDFIPQGLANSIWAFGHLGIKPSAQFIR HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHH PFSKLVKVVQNYKCQRSN HHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA