Definition Orientia tsutsugamushi Boryong, complete genome.
Accession NC_009488
Length 2,127,051

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The map label for this gene is 148284567

Identifier: 148284567

GI number: 148284567

Start: 1001545

End: 1002828

Strand: Direct

Name: 148284567

Synonym: OTBS_1016

Alternate gene names: NA

Gene position: 1001545-1002828 (Clockwise)

Preceding gene: 148284566

Following gene: 148284568

Centisome position: 47.09

GC content: 32.63

Gene sequence:

>1284_bases
ATGCAAATCTATAAAAAAACAACTTTTTTTGTGTTACTTTTTACACTGCTAAGCAGTACTACTATTTATGCTAATGCTAA
TTATACAGTAGTTAATAATTGCATTATTCAAAATAGAAAATTTCCAGTCACTATCTCAACTGATGGTATTGATAATGCTT
TAAGCGCAGTTAATGTTCTTGGGTTAATAAATGATAAATATGGCTTGAGTAATAGCATTATTGGCAGAATTATAGCAGGC
TATTCTAGCTTTTATATAGTATTGCTTCATCATGAGGTTATAGGGCATGGTCGCAGAGCATATGAATTTGGTGGTACAGT
AGATGGATATACACTAAGATTATTTAGCGCTGCTACTGATTATAATCTTTCACCAAATTCCCATCCACAACAACACAATG
CAATAACTCTTGCAGGAGTACAAGTTAATACTTGCTTAGCGTCTAGAATTATCAATCAATTGCTACAAACAAAACAACTT
TTAAGTCCAGTTACTGCTTGGAGTTATATTTTTAGCGCAGGAAATCAACTTTGGTATGTATTGCATGATGTTATATTTGA
ACAAGCTCATGAATTAGGAACAGGTGATATTAGAAGTCATATACTAGATATGGAAAAGATTTATGGTAAAACTTCAATAC
AGAATAAAATCCGTTCTTTATGTTTTTTAGATCTTATGAATCCAATGGTATTCGCATCCTTTTATGCAATAGCATCTGGT
CAAAACATCCAAGTTCCTATGATACCTCTAGGACAGATAAATGGGTTGGGGCAAATTGGATTTATGCCTTCAGTAAATCT
TATCTTAACTCCATATAACGTACTAGAAAAACGAATAACAGTGCATATTAACACTGAATATACTCCTATAAAAATAGCAT
TTGGATTTGGGCAAGAGCTAAAATCAAATGATACTGTATATCATACTTCAGATGATTCTGTATGTGATTCTTCAAATTCG
TGGTATTTTATTAAAAAAGATTCAACTCCTTCTAAAGAACACGATACTTATTACTTAGAACTTAGCGTTGCACGCTTTTT
CTCTATAAGTAAAGTTGATTTAGGTGGAAGTTTAATAATATGGAGACAACCAGAGTTAATGACTCCAGTTCCAAGGCATG
CTGAAATTAAAAATGGCATCATGGGATCACTAAATTTAACTTTTAACATAGATGACAGGTTCAGCATTTTCGCTGAAGCA
GGTTATAAAACCAAGGGGTTCATTTTAGACAGACCAGTAGATGAAGGTCCTCTCATAAGTTTTGCAGTGCAATGTTTAGT
ATAG

Upstream 100 bases:

>100_bases
TCAGCTTGTAATATTTTTTACTTTTTCATTGCTTAAACCCTCTATCTATAACATAAAATCAATTTAAAATTGAAGAATTG
ATTTTAAAGCTAACATTACT

Downstream 100 bases:

>100_bases
AAAACATGTAATTCTTTTGCTAGATCTATTGCAAATTCAATCAAGGTTGAGATTATAAATATAGCTTAATTAGAAAGGTA
TTTACACATTATTTCATTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MQIYKKTTFFVLLFTLLSSTTIYANANYTVVNNCIIQNRKFPVTISTDGIDNALSAVNVLGLINDKYGLSNSIIGRIIAG
YSSFYIVLLHHEVIGHGRRAYEFGGTVDGYTLRLFSAATDYNLSPNSHPQQHNAITLAGVQVNTCLASRIINQLLQTKQL
LSPVTAWSYIFSAGNQLWYVLHDVIFEQAHELGTGDIRSHILDMEKIYGKTSIQNKIRSLCFLDLMNPMVFASFYAIASG
QNIQVPMIPLGQINGLGQIGFMPSVNLILTPYNVLEKRITVHINTEYTPIKIAFGFGQELKSNDTVYHTSDDSVCDSSNS
WYFIKKDSTPSKEHDTYYLELSVARFFSISKVDLGGSLIIWRQPELMTPVPRHAEIKNGIMGSLNLTFNIDDRFSIFAEA
GYKTKGFILDRPVDEGPLISFAVQCLV

Sequences:

>Translated_427_residues
MQIYKKTTFFVLLFTLLSSTTIYANANYTVVNNCIIQNRKFPVTISTDGIDNALSAVNVLGLINDKYGLSNSIIGRIIAG
YSSFYIVLLHHEVIGHGRRAYEFGGTVDGYTLRLFSAATDYNLSPNSHPQQHNAITLAGVQVNTCLASRIINQLLQTKQL
LSPVTAWSYIFSAGNQLWYVLHDVIFEQAHELGTGDIRSHILDMEKIYGKTSIQNKIRSLCFLDLMNPMVFASFYAIASG
QNIQVPMIPLGQINGLGQIGFMPSVNLILTPYNVLEKRITVHINTEYTPIKIAFGFGQELKSNDTVYHTSDDSVCDSSNS
WYFIKKDSTPSKEHDTYYLELSVARFFSISKVDLGGSLIIWRQPELMTPVPRHAEIKNGIMGSLNLTFNIDDRFSIFAEA
GYKTKGFILDRPVDEGPLISFAVQCLV
>Mature_427_residues
MQIYKKTTFFVLLFTLLSSTTIYANANYTVVNNCIIQNRKFPVTISTDGIDNALSAVNVLGLINDKYGLSNSIIGRIIAG
YSSFYIVLLHHEVIGHGRRAYEFGGTVDGYTLRLFSAATDYNLSPNSHPQQHNAITLAGVQVNTCLASRIINQLLQTKQL
LSPVTAWSYIFSAGNQLWYVLHDVIFEQAHELGTGDIRSHILDMEKIYGKTSIQNKIRSLCFLDLMNPMVFASFYAIASG
QNIQVPMIPLGQINGLGQIGFMPSVNLILTPYNVLEKRITVHINTEYTPIKIAFGFGQELKSNDTVYHTSDDSVCDSSNS
WYFIKKDSTPSKEHDTYYLELSVARFFSISKVDLGGSLIIWRQPELMTPVPRHAEIKNGIMGSLNLTFNIDDRFSIFAEA
GYKTKGFILDRPVDEGPLISFAVQCLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47717; Mature: 47717

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIYKKTTFFVLLFTLLSSTTIYANANYTVVNNCIIQNRKFPVTISTDGIDNALSAVNVL
CCCCHHHHHHHHHHHHHCCCEEEECCCEEEEEEEEEECCEEEEEEECCCCHHHHHHHHHH
GLINDKYGLSNSIIGRIIAGYSSFYIVLLHHEVIGHGRRAYEFGGTVDGYTLRLFSAATD
HEECCCCCCCHHHHHHHHHCCCEEEEEEEEEHHHCCCCEEEECCCCCCCEEEEEEEECCC
YNLSPNSHPQQHNAITLAGVQVNTCLASRIINQLLQTKQLLSPVTAWSYIFSAGNQLWYV
CCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LHDVIFEQAHELGTGDIRSHILDMEKIYGKTSIQNKIRSLCFLDLMNPMVFASFYAIASG
HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QNIQVPMIPLGQINGLGQIGFMPSVNLILTPYNVLEKRITVHINTEYTPIKIAFGFGQEL
CCEEEEEEECCCCCCCCCCCCCCCCCEEECCHHHHCCEEEEEEECCCCEEEEEECCCCCC
KSNDTVYHTSDDSVCDSSNSWYFIKKDSTPSKEHDTYYLELSVARFFSISKVDLGGSLII
CCCCCEEECCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEHHHEEEEEECCCCEEEE
WRQPELMTPVPRHAEIKNGIMGSLNLTFNIDDRFSIFAEAGYKTKGFILDRPVDEGPLIS
EECCCCCCCCCCCHHHHCCCEEEEEEEEEECCCEEEEEECCCCCCCEEEECCCCCCCHHH
FAVQCLV
HHHHHCC
>Mature Secondary Structure
MQIYKKTTFFVLLFTLLSSTTIYANANYTVVNNCIIQNRKFPVTISTDGIDNALSAVNVL
CCCCHHHHHHHHHHHHHCCCEEEECCCEEEEEEEEEECCEEEEEEECCCCHHHHHHHHHH
GLINDKYGLSNSIIGRIIAGYSSFYIVLLHHEVIGHGRRAYEFGGTVDGYTLRLFSAATD
HEECCCCCCCHHHHHHHHHCCCEEEEEEEEEHHHCCCCEEEECCCCCCCEEEEEEEECCC
YNLSPNSHPQQHNAITLAGVQVNTCLASRIINQLLQTKQLLSPVTAWSYIFSAGNQLWYV
CCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LHDVIFEQAHELGTGDIRSHILDMEKIYGKTSIQNKIRSLCFLDLMNPMVFASFYAIASG
HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QNIQVPMIPLGQINGLGQIGFMPSVNLILTPYNVLEKRITVHINTEYTPIKIAFGFGQEL
CCEEEEEEECCCCCCCCCCCCCCCCCEEECCHHHHCCEEEEEEECCCCEEEEEECCCCCC
KSNDTVYHTSDDSVCDSSNSWYFIKKDSTPSKEHDTYYLELSVARFFSISKVDLGGSLII
CCCCCEEECCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEHHHEEEEEECCCCEEEE
WRQPELMTPVPRHAEIKNGIMGSLNLTFNIDDRFSIFAEAGYKTKGFILDRPVDEGPLIS
EECCCCCCCCCCCHHHHCCCEEEEEEEEEECCCEEEEEECCCCCCCEEEECCCCCCCHHH
FAVQCLV
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA