| Definition | Orientia tsutsugamushi Boryong, complete genome. |
|---|---|
| Accession | NC_009488 |
| Length | 2,127,051 |
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The map label for this gene is 148284567
Identifier: 148284567
GI number: 148284567
Start: 1001545
End: 1002828
Strand: Direct
Name: 148284567
Synonym: OTBS_1016
Alternate gene names: NA
Gene position: 1001545-1002828 (Clockwise)
Preceding gene: 148284566
Following gene: 148284568
Centisome position: 47.09
GC content: 32.63
Gene sequence:
>1284_bases ATGCAAATCTATAAAAAAACAACTTTTTTTGTGTTACTTTTTACACTGCTAAGCAGTACTACTATTTATGCTAATGCTAA TTATACAGTAGTTAATAATTGCATTATTCAAAATAGAAAATTTCCAGTCACTATCTCAACTGATGGTATTGATAATGCTT TAAGCGCAGTTAATGTTCTTGGGTTAATAAATGATAAATATGGCTTGAGTAATAGCATTATTGGCAGAATTATAGCAGGC TATTCTAGCTTTTATATAGTATTGCTTCATCATGAGGTTATAGGGCATGGTCGCAGAGCATATGAATTTGGTGGTACAGT AGATGGATATACACTAAGATTATTTAGCGCTGCTACTGATTATAATCTTTCACCAAATTCCCATCCACAACAACACAATG CAATAACTCTTGCAGGAGTACAAGTTAATACTTGCTTAGCGTCTAGAATTATCAATCAATTGCTACAAACAAAACAACTT TTAAGTCCAGTTACTGCTTGGAGTTATATTTTTAGCGCAGGAAATCAACTTTGGTATGTATTGCATGATGTTATATTTGA ACAAGCTCATGAATTAGGAACAGGTGATATTAGAAGTCATATACTAGATATGGAAAAGATTTATGGTAAAACTTCAATAC AGAATAAAATCCGTTCTTTATGTTTTTTAGATCTTATGAATCCAATGGTATTCGCATCCTTTTATGCAATAGCATCTGGT CAAAACATCCAAGTTCCTATGATACCTCTAGGACAGATAAATGGGTTGGGGCAAATTGGATTTATGCCTTCAGTAAATCT TATCTTAACTCCATATAACGTACTAGAAAAACGAATAACAGTGCATATTAACACTGAATATACTCCTATAAAAATAGCAT TTGGATTTGGGCAAGAGCTAAAATCAAATGATACTGTATATCATACTTCAGATGATTCTGTATGTGATTCTTCAAATTCG TGGTATTTTATTAAAAAAGATTCAACTCCTTCTAAAGAACACGATACTTATTACTTAGAACTTAGCGTTGCACGCTTTTT CTCTATAAGTAAAGTTGATTTAGGTGGAAGTTTAATAATATGGAGACAACCAGAGTTAATGACTCCAGTTCCAAGGCATG CTGAAATTAAAAATGGCATCATGGGATCACTAAATTTAACTTTTAACATAGATGACAGGTTCAGCATTTTCGCTGAAGCA GGTTATAAAACCAAGGGGTTCATTTTAGACAGACCAGTAGATGAAGGTCCTCTCATAAGTTTTGCAGTGCAATGTTTAGT ATAG
Upstream 100 bases:
>100_bases TCAGCTTGTAATATTTTTTACTTTTTCATTGCTTAAACCCTCTATCTATAACATAAAATCAATTTAAAATTGAAGAATTG ATTTTAAAGCTAACATTACT
Downstream 100 bases:
>100_bases AAAACATGTAATTCTTTTGCTAGATCTATTGCAAATTCAATCAAGGTTGAGATTATAAATATAGCTTAATTAGAAAGGTA TTTACACATTATTTCATTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 427; Mature: 427
Protein sequence:
>427_residues MQIYKKTTFFVLLFTLLSSTTIYANANYTVVNNCIIQNRKFPVTISTDGIDNALSAVNVLGLINDKYGLSNSIIGRIIAG YSSFYIVLLHHEVIGHGRRAYEFGGTVDGYTLRLFSAATDYNLSPNSHPQQHNAITLAGVQVNTCLASRIINQLLQTKQL LSPVTAWSYIFSAGNQLWYVLHDVIFEQAHELGTGDIRSHILDMEKIYGKTSIQNKIRSLCFLDLMNPMVFASFYAIASG QNIQVPMIPLGQINGLGQIGFMPSVNLILTPYNVLEKRITVHINTEYTPIKIAFGFGQELKSNDTVYHTSDDSVCDSSNS WYFIKKDSTPSKEHDTYYLELSVARFFSISKVDLGGSLIIWRQPELMTPVPRHAEIKNGIMGSLNLTFNIDDRFSIFAEA GYKTKGFILDRPVDEGPLISFAVQCLV
Sequences:
>Translated_427_residues MQIYKKTTFFVLLFTLLSSTTIYANANYTVVNNCIIQNRKFPVTISTDGIDNALSAVNVLGLINDKYGLSNSIIGRIIAG YSSFYIVLLHHEVIGHGRRAYEFGGTVDGYTLRLFSAATDYNLSPNSHPQQHNAITLAGVQVNTCLASRIINQLLQTKQL LSPVTAWSYIFSAGNQLWYVLHDVIFEQAHELGTGDIRSHILDMEKIYGKTSIQNKIRSLCFLDLMNPMVFASFYAIASG QNIQVPMIPLGQINGLGQIGFMPSVNLILTPYNVLEKRITVHINTEYTPIKIAFGFGQELKSNDTVYHTSDDSVCDSSNS WYFIKKDSTPSKEHDTYYLELSVARFFSISKVDLGGSLIIWRQPELMTPVPRHAEIKNGIMGSLNLTFNIDDRFSIFAEA GYKTKGFILDRPVDEGPLISFAVQCLV >Mature_427_residues MQIYKKTTFFVLLFTLLSSTTIYANANYTVVNNCIIQNRKFPVTISTDGIDNALSAVNVLGLINDKYGLSNSIIGRIIAG YSSFYIVLLHHEVIGHGRRAYEFGGTVDGYTLRLFSAATDYNLSPNSHPQQHNAITLAGVQVNTCLASRIINQLLQTKQL LSPVTAWSYIFSAGNQLWYVLHDVIFEQAHELGTGDIRSHILDMEKIYGKTSIQNKIRSLCFLDLMNPMVFASFYAIASG QNIQVPMIPLGQINGLGQIGFMPSVNLILTPYNVLEKRITVHINTEYTPIKIAFGFGQELKSNDTVYHTSDDSVCDSSNS WYFIKKDSTPSKEHDTYYLELSVARFFSISKVDLGGSLIIWRQPELMTPVPRHAEIKNGIMGSLNLTFNIDDRFSIFAEA GYKTKGFILDRPVDEGPLISFAVQCLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47717; Mature: 47717
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIYKKTTFFVLLFTLLSSTTIYANANYTVVNNCIIQNRKFPVTISTDGIDNALSAVNVL CCCCHHHHHHHHHHHHHCCCEEEECCCEEEEEEEEEECCEEEEEEECCCCHHHHHHHHHH GLINDKYGLSNSIIGRIIAGYSSFYIVLLHHEVIGHGRRAYEFGGTVDGYTLRLFSAATD HEECCCCCCCHHHHHHHHHCCCEEEEEEEEEHHHCCCCEEEECCCCCCCEEEEEEEECCC YNLSPNSHPQQHNAITLAGVQVNTCLASRIINQLLQTKQLLSPVTAWSYIFSAGNQLWYV CCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH LHDVIFEQAHELGTGDIRSHILDMEKIYGKTSIQNKIRSLCFLDLMNPMVFASFYAIASG HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC QNIQVPMIPLGQINGLGQIGFMPSVNLILTPYNVLEKRITVHINTEYTPIKIAFGFGQEL CCEEEEEEECCCCCCCCCCCCCCCCCEEECCHHHHCCEEEEEEECCCCEEEEEECCCCCC KSNDTVYHTSDDSVCDSSNSWYFIKKDSTPSKEHDTYYLELSVARFFSISKVDLGGSLII CCCCCEEECCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEHHHEEEEEECCCCEEEE WRQPELMTPVPRHAEIKNGIMGSLNLTFNIDDRFSIFAEAGYKTKGFILDRPVDEGPLIS EECCCCCCCCCCCHHHHCCCEEEEEEEEEECCCEEEEEECCCCCCCEEEECCCCCCCHHH FAVQCLV HHHHHCC >Mature Secondary Structure MQIYKKTTFFVLLFTLLSSTTIYANANYTVVNNCIIQNRKFPVTISTDGIDNALSAVNVL CCCCHHHHHHHHHHHHHCCCEEEECCCEEEEEEEEEECCEEEEEEECCCCHHHHHHHHHH GLINDKYGLSNSIIGRIIAGYSSFYIVLLHHEVIGHGRRAYEFGGTVDGYTLRLFSAATD HEECCCCCCCHHHHHHHHHCCCEEEEEEEEEHHHCCCCEEEECCCCCCCEEEEEEEECCC YNLSPNSHPQQHNAITLAGVQVNTCLASRIINQLLQTKQLLSPVTAWSYIFSAGNQLWYV CCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH LHDVIFEQAHELGTGDIRSHILDMEKIYGKTSIQNKIRSLCFLDLMNPMVFASFYAIASG HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC QNIQVPMIPLGQINGLGQIGFMPSVNLILTPYNVLEKRITVHINTEYTPIKIAFGFGQEL CCEEEEEEECCCCCCCCCCCCCCCCCEEECCHHHHCCEEEEEEECCCCEEEEEECCCCCC KSNDTVYHTSDDSVCDSSNSWYFIKKDSTPSKEHDTYYLELSVARFFSISKVDLGGSLII CCCCCEEECCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEHHHEEEEEECCCCEEEE WRQPELMTPVPRHAEIKNGIMGSLNLTFNIDDRFSIFAEAGYKTKGFILDRPVDEGPLIS EECCCCCCCCCCCHHHHCCCEEEEEEEEEECCCEEEEEECCCCCCCEEEECCCCCCCHHH FAVQCLV HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA