Click here to switch to the map view.

The map label for this gene is 148284274

Identifier: 148284274

GI number: 148284274

Start: 442860

End: 443591

Strand: Direct

Name: 148284274

Synonym: OTBS_0467

Alternate gene names: NA

Gene position: 442860-443591 (Clockwise)

Preceding gene: 148284273

Following gene: 148284275

Centisome position: 20.82

GC content: 29.92

Gene sequence:

>732_bases
ATGGCTAAATTACGTATATTGAACATAATCAACCTTAAATGGAAGTGTTTAAGGTTATTGATGTTTTGCTATCTAGCAAT
TAACAATATACAAGCAAATAGCATTACTAATTATAACAACAAGTCAAATTCATATATTGATATAAGCTATAGTAATGAGC
TTCACTCATGCCAAGTTACCAATAATTATGAGCCAGAAGTTTTCAGTATCACAAATAATTTATTACGGCAAGTTGGACAA
AATCCTCATATCAAAGGTACAATAGTAGTTATAAAAGGCACTGTCATTGATAAGCATTGCATTCCAGTTCCTGACGCAAA
AATCTATCTATGGCAAGTTGATAGTAATGGTAAGTATCCATATACTCCTCTCAAAAATTCTATTGATCAATCTCTAATTA
GTAATAATAATTTAGAGAGTACTTTTACTGGTTCAGGTGTTACCACCACGAATAACAACGGTAATTTTTATTTTATTACT
ATCTACCCTGCTGCAGTACACAATATTTTACCTCATTTTAACTTCAGAGCTGAACATACAGAGCTTGGCAGTTTACAAAC
AGTACATATAATCAAGAATGATATAAGATTTAAGATATCATGTAATGATCATATGCTCTACAATAATATTGACAACTATT
TTATTGTAGAACATGTAACACTAGTAATGCCATTAGCAAGTAAACTAAGGAGATATATTCTACATGCTAGTACTAAACAT
AATGCAAATTAA

Upstream 100 bases:

>100_bases
ACGTTATATCTAATATTATTAGAATTAAATATTGATGCAATATGACAAATATGATAAAGTATCTGTTATTGATAGTAAAA
TAGATTTCATATATTTATAA

Downstream 100 bases:

>100_bases
AATAGGGCAAAAAAGTTAATCTAAGCTTTAAATTTATATTGATATAAAAAGCATAGTGTTAAAAATGGACAAAATTGAAA
GTGAATAAGTTCGAATTAGA

Product: intradiol ring-cleavage dioxygenase

Products: 3-carboxy-cis,cis-muconate

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MAKLRILNIINLKWKCLRLLMFCYLAINNIQANSITNYNNKSNSYIDISYSNELHSCQVTNNYEPEVFSITNNLLRQVGQ
NPHIKGTIVVIKGTVIDKHCIPVPDAKIYLWQVDSNGKYPYTPLKNSIDQSLISNNNLESTFTGSGVTTTNNNGNFYFIT
IYPAAVHNILPHFNFRAEHTELGSLQTVHIIKNDIRFKISCNDHMLYNNIDNYFIVEHVTLVMPLASKLRRYILHASTKH
NAN

Sequences:

>Translated_243_residues
MAKLRILNIINLKWKCLRLLMFCYLAINNIQANSITNYNNKSNSYIDISYSNELHSCQVTNNYEPEVFSITNNLLRQVGQ
NPHIKGTIVVIKGTVIDKHCIPVPDAKIYLWQVDSNGKYPYTPLKNSIDQSLISNNNLESTFTGSGVTTTNNNGNFYFIT
IYPAAVHNILPHFNFRAEHTELGSLQTVHIIKNDIRFKISCNDHMLYNNIDNYFIVEHVTLVMPLASKLRRYILHASTKH
NAN
>Mature_242_residues
AKLRILNIINLKWKCLRLLMFCYLAINNIQANSITNYNNKSNSYIDISYSNELHSCQVTNNYEPEVFSITNNLLRQVGQN
PHIKGTIVVIKGTVIDKHCIPVPDAKIYLWQVDSNGKYPYTPLKNSIDQSLISNNNLESTFTGSGVTTTNNNGNFYFITI
YPAAVHNILPHFNFRAEHTELGSLQTVHIIKNDIRFKISCNDHMLYNNIDNYFIVEHVTLVMPLASKLRRYILHASTKHN
AN

Specific function: Unknown

COG id: COG3485

COG function: function code Q; Protocatechuate 3,4-dioxygenase beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the intradiol ring-cleavage dioxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000627
- InterPro:   IPR015889 [H]

Pfam domain/function: PF00775 Dioxygenase_C [H]

EC number: 1.13.11.3

Molecular weight: Translated: 27832; Mature: 27701

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKLRILNIINLKWKCLRLLMFCYLAINNIQANSITNYNNKSNSYIDISYSNELHSCQVT
CCEEEEEEEECCCHHHHHHHHHHHHHHCCEECCCEECCCCCCCCEEEEEECCCCEEEEEC
NNYEPEVFSITNNLLRQVGQNPHIKGTIVVIKGTVIDKHCIPVPDAKIYLWQVDSNGKYP
CCCCCCEEHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCC
YTPLKNSIDQSLISNNNLESTFTGSGVTTTNNNGNFYFITIYPAAVHNILPHFNFRAEHT
CCHHHHHHHHHHHCCCCCCEEECCCCEEEECCCCCEEEEEEEHHHHHHHCCCCCCCCCCC
ELGSLQTVHIIKNDIRFKISCNDHMLYNNIDNYFIVEHVTLVMPLASKLRRYILHASTKH
CCCCEEEEEEEECCEEEEEECCCEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCC
NAN
CCC
>Mature Secondary Structure 
AKLRILNIINLKWKCLRLLMFCYLAINNIQANSITNYNNKSNSYIDISYSNELHSCQVT
CEEEEEEEECCCHHHHHHHHHHHHHHCCEECCCEECCCCCCCCEEEEEECCCCEEEEEC
NNYEPEVFSITNNLLRQVGQNPHIKGTIVVIKGTVIDKHCIPVPDAKIYLWQVDSNGKYP
CCCCCCEEHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCCCCEEEEEEECCCCCCC
YTPLKNSIDQSLISNNNLESTFTGSGVTTTNNNGNFYFITIYPAAVHNILPHFNFRAEHT
CCHHHHHHHHHHHCCCCCCEEECCCCEEEECCCCCEEEEEEEHHHHHHHCCCCCCCCCCC
ELGSLQTVHIIKNDIRFKISCNDHMLYNNIDNYFIVEHVTLVMPLASKLRRYILHASTKH
CCCCEEEEEEEECCEEEEEECCCEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCC
NAN
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 3,4-dihydroxybenzoate; O2

Specific reaction: 3,4-dihydroxybenzoate + O2 = 3-carboxy-cis,cis-muconate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]