| Definition | Orientia tsutsugamushi Boryong, complete genome. |
|---|---|
| Accession | NC_009488 |
| Length | 2,127,051 |
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The map label for this gene is apaG [H]
Identifier: 148284173
GI number: 148284173
Start: 324523
End: 324948
Strand: Direct
Name: apaG [H]
Synonym: OTBS_0329
Alternate gene names: 148284173
Gene position: 324523-324948 (Clockwise)
Preceding gene: 148284172
Following gene: 148284175
Centisome position: 15.26
GC content: 30.99
Gene sequence:
>426_bases ATGAATATAGAGAATCATCAATTTAATGGATTTCATGCTTTAACAGCTGATATATTGGTAACTGTAAGGCCAGCTTTTTA TCCTGAAGCATCTAATAGATTACGTTCTATATATGTATGGCTATATAATGTCCGAATCAAAAATTTAAGACAGAATCCTG TACAATTATTAAGTAGATATTGGCAAATATATGATTCTAGTAGTACAGTTGAAGAAACAGAAGGAGAAGGAGTAGTAGGT CAGCAGCCTGTCTTAAATTCTATGGAAGTTTTTGAATATGTAAGCCAAACCAGGTTATTTACTAATTCTGGTCTTATGAA AGGAAAATACACTATGCTGGATAAGTCATCTTTGGAAAAATTCAAAGTTACAATACCAACTTTTTCATTTGATGTCGACC TATTAAATCCCAAGTTTAAAAACTAA
Upstream 100 bases:
>100_bases GTGACTTTTTGATGTTTTTGCATAAGTTTTGTCAATTTTTTAGTAGTTTAATTAAATTATATTATTATTATTTTATTAGT ATCATTGAAATTATAATATA
Downstream 100 bases:
>100_bases TATAACATGATCAGTTGTGAGATATTAATATTTTCTTGTTGCAATCATAATTATTTTAGGTAACATTAGCGTATGTTTGT CACTTTTTAACAATTCTAAC
Product: ApaG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MNIENHQFNGFHALTADILVTVRPAFYPEASNRLRSIYVWLYNVRIKNLRQNPVQLLSRYWQIYDSSSTVEETEGEGVVG QQPVLNSMEVFEYVSQTRLFTNSGLMKGKYTMLDKSSLEKFKVTIPTFSFDVDLLNPKFKN
Sequences:
>Translated_141_residues MNIENHQFNGFHALTADILVTVRPAFYPEASNRLRSIYVWLYNVRIKNLRQNPVQLLSRYWQIYDSSSTVEETEGEGVVG QQPVLNSMEVFEYVSQTRLFTNSGLMKGKYTMLDKSSLEKFKVTIPTFSFDVDLLNPKFKN >Mature_141_residues MNIENHQFNGFHALTADILVTVRPAFYPEASNRLRSIYVWLYNVRIKNLRQNPVQLLSRYWQIYDSSSTVEETEGEGVVG QQPVLNSMEVFEYVSQTRLFTNSGLMKGKYTMLDKSSLEKFKVTIPTFSFDVDLLNPKFKN
Specific function: Unknown
COG id: COG2967
COG function: function code P; Uncharacterized protein affecting Mg2+/Co2+ transport
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 apaG domain [H]
Homologues:
Organism=Homo sapiens, GI7661672, Length=118, Percent_Identity=36.4406779661017, Blast_Score=76, Evalue=9e-15, Organism=Homo sapiens, GI15812188, Length=135, Percent_Identity=37.037037037037, Blast_Score=74, Evalue=3e-14, Organism=Homo sapiens, GI15812186, Length=132, Percent_Identity=35.6060606060606, Blast_Score=74, Evalue=4e-14, Organism=Escherichia coli, GI1786235, Length=98, Percent_Identity=41.8367346938776, Blast_Score=81, Evalue=2e-17, Organism=Drosophila melanogaster, GI21356905, Length=118, Percent_Identity=35.5932203389831, Blast_Score=76, Evalue=6e-15, Organism=Drosophila melanogaster, GI24644238, Length=118, Percent_Identity=35.5932203389831, Blast_Score=76, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007474 - InterPro: IPR023065 [H]
Pfam domain/function: PF04379 DUF525 [H]
EC number: NA
Molecular weight: Translated: 16381; Mature: 16381
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: PS51087 APAG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIENHQFNGFHALTADILVTVRPAFYPEASNRLRSIYVWLYNVRIKNLRQNPVQLLSRY CCCCCCCCCCCHHHEEEEEEEECCCCCCCCHHHHEEEEEEEEEEEEECCCCCHHHHHHHH WQIYDSSSTVEETEGEGVVGQQPVLNSMEVFEYVSQTRLFTNSGLMKGKYTMLDKSSLEK HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCEEEECCCCCCCE FKVTIPTFSFDVDLLNPKFKN EEEECCCEEEEEEECCCCCCC >Mature Secondary Structure MNIENHQFNGFHALTADILVTVRPAFYPEASNRLRSIYVWLYNVRIKNLRQNPVQLLSRY CCCCCCCCCCCHHHEEEEEEEECCCCCCCCHHHHEEEEEEEEEEEEECCCCCHHHHHHHH WQIYDSSSTVEETEGEGVVGQQPVLNSMEVFEYVSQTRLFTNSGLMKGKYTMLDKSSLEK HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCEEEECCCCCCCE FKVTIPTFSFDVDLLNPKFKN EEEECCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA