| Definition | Orientia tsutsugamushi Boryong, complete genome. |
|---|---|
| Accession | NC_009488 |
| Length | 2,127,051 |
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The map label for this gene is 148284168
Identifier: 148284168
GI number: 148284168
Start: 310889
End: 312694
Strand: Direct
Name: 148284168
Synonym: OTBS_0314
Alternate gene names: NA
Gene position: 310889-312694 (Clockwise)
Preceding gene: 148284167
Following gene: 148284169
Centisome position: 14.62
GC content: 25.58
Gene sequence:
>1806_bases ATGAGAAAAGTATATATAATTTTAATTACAAGCATTGTAGTACTATTACTTTTGCTTATTAGTTGGTATGCGGTATGGGA AATATTGGCTAATCGAATCACTAAAACATATGGAAAAAGAGATATTACAGTATATCAACAAGATAGCACTTACTCAACTA TTAGCTTTTCAACTGTTAAAGCAATCACTACGCCTCTTAGTATAGGATTCGATGTTTTAGGTGTTACTATCAGTAGTATA TCCGATAGTAACATATCTGAAATAATAAAATGCGATTCACCAATTAAAATAAGATATAGTTTAGCATCTAAAATTTTTTT AATAGAGTATAGTGGTCAATGTTACAGTAAGCAGACATATGACTCGAAATCAAGTTTTAACAATAATGTAGTTAAGATAG ATGCTACGATATCTAGCGAATTAAAATTGTCAAAAAGACTATTTCAAATATTGAAAGAACATAATGCATTTGAATTAATC AATTATCTAAATCATTTTAAGCTTAACGTTAGAGAGTTTTCTGATTATGATAATGTTAAAAATCTACTAAAAAATAAAAT ACTAAAATCGTATTTTCACATTAGTTTTGATAATCATCCATATTATTACAGTGTTGATGATCTTCGAAATGATATACCTA AAAATTATGCTATAGATAGCAAAATTACAGTAGATCATATGAATTATTCATTTTCTCCTTGGAGTTTTGAGTTTAAATCA ACTTTGGATTTGTTATTACCGAAAGTTTCTTGGTATTCCATAACAAAAAATATAGAGCAGAATAGTTTTAACGGTCAATT AAATATTGAAAACCTATCTTATGAAGATGATAAGCTGGCAGTATCTAGTAAAATAGATTATCAAAACTTAGCTCATATAG AAAATAAAAACAATAAATTAGCGACCTATTCTATTTTAAATATCAAGGATAAATTATCTTTTATTAAGATTTTACTGGCT AGTATTTTAAATATAGATGATGAAGAAAAAACAAATTCTGATATTACTGCTATATTACAGAAGATGGAAAATTTTGATTT TAAAACAGCAATGCAAAACATAGCTTTTGTATATACCGATAATGATATGTCATTACAAAAAAAAGAATGTTTAGCAAAAT TAGATTATTTTGATCAAATAATTAATACAATTGCATTCCCTAATCAAATAATGCTAAATCTGGATTTTGAATTATTATCT AGTAGCAAGAGTAACATATTTAGACTTAATTTCTTAAAAATATTATTAAATGATTTTGGAATTGATATCAAAGACTCTCT CTATGACACAACAAATCCAAGGTTTATCACTAATTTTTATCTGCTAAATTTTAGAGATTTAGTAGACTTTATTATTGACT TTTACAATATTAAAACAATTATTGAAAATCATATTAAACTAAATAGTAAAGAAAACAAAATAGATGAAAATATACTGCAA CAAAATCAATTAGTTGAACTTAATAAAGATATTTTAAAGTCGTTTTTATCAAAAATTTCAAAGCCATTACATGGTTCACC AAATATTAGAGTAATCAATTGTCATTATGATATATCTAATAAAATAAGAATTGGTAATTTAGACTTACTGGCAATAAGAG GTATGTACTATAGAACACTATATAATCAGGTACGTGAAATAATTACTAAATCTTCTACTCCTAGCAAACTAATACTAAAG TTTTTACCTCAGCTGCAGCAAAAGTCTGACTTAATAGATAAGCTAAATCGTTCTCCAGAAATTATTACACAAGAATTATG GATGGAAGTTTTAAAATCATTGTTAGAAGCACCAGCATGCCAGTAG
Upstream 100 bases:
>100_bases TAATGGGAGTATTTATACTAGTAGTTTTAATTTGGTTAATTGATGTTGTAAACCTTTATCATAAATATGATGATTTACAA CAATTTATGGAAAAGAAGTA
Downstream 100 bases:
>100_bases AATTTAAGTATATAAGTGTATGAACTTAAAATTCAGTAACAACTGTAATAGCTTTATCGATAAATTAAGTAATTTTCTAG ATAAAGATATGTCTGAAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 601; Mature: 601
Protein sequence:
>601_residues MRKVYIILITSIVVLLLLLISWYAVWEILANRITKTYGKRDITVYQQDSTYSTISFSTVKAITTPLSIGFDVLGVTISSI SDSNISEIIKCDSPIKIRYSLASKIFLIEYSGQCYSKQTYDSKSSFNNNVVKIDATISSELKLSKRLFQILKEHNAFELI NYLNHFKLNVREFSDYDNVKNLLKNKILKSYFHISFDNHPYYYSVDDLRNDIPKNYAIDSKITVDHMNYSFSPWSFEFKS TLDLLLPKVSWYSITKNIEQNSFNGQLNIENLSYEDDKLAVSSKIDYQNLAHIENKNNKLATYSILNIKDKLSFIKILLA SILNIDDEEKTNSDITAILQKMENFDFKTAMQNIAFVYTDNDMSLQKKECLAKLDYFDQIINTIAFPNQIMLNLDFELLS SSKSNIFRLNFLKILLNDFGIDIKDSLYDTTNPRFITNFYLLNFRDLVDFIIDFYNIKTIIENHIKLNSKENKIDENILQ QNQLVELNKDILKSFLSKISKPLHGSPNIRVINCHYDISNKIRIGNLDLLAIRGMYYRTLYNQVREIITKSSTPSKLILK FLPQLQQKSDLIDKLNRSPEIITQELWMEVLKSLLEAPACQ
Sequences:
>Translated_601_residues MRKVYIILITSIVVLLLLLISWYAVWEILANRITKTYGKRDITVYQQDSTYSTISFSTVKAITTPLSIGFDVLGVTISSI SDSNISEIIKCDSPIKIRYSLASKIFLIEYSGQCYSKQTYDSKSSFNNNVVKIDATISSELKLSKRLFQILKEHNAFELI NYLNHFKLNVREFSDYDNVKNLLKNKILKSYFHISFDNHPYYYSVDDLRNDIPKNYAIDSKITVDHMNYSFSPWSFEFKS TLDLLLPKVSWYSITKNIEQNSFNGQLNIENLSYEDDKLAVSSKIDYQNLAHIENKNNKLATYSILNIKDKLSFIKILLA SILNIDDEEKTNSDITAILQKMENFDFKTAMQNIAFVYTDNDMSLQKKECLAKLDYFDQIINTIAFPNQIMLNLDFELLS SSKSNIFRLNFLKILLNDFGIDIKDSLYDTTNPRFITNFYLLNFRDLVDFIIDFYNIKTIIENHIKLNSKENKIDENILQ QNQLVELNKDILKSFLSKISKPLHGSPNIRVINCHYDISNKIRIGNLDLLAIRGMYYRTLYNQVREIITKSSTPSKLILK FLPQLQQKSDLIDKLNRSPEIITQELWMEVLKSLLEAPACQ >Mature_601_residues MRKVYIILITSIVVLLLLLISWYAVWEILANRITKTYGKRDITVYQQDSTYSTISFSTVKAITTPLSIGFDVLGVTISSI SDSNISEIIKCDSPIKIRYSLASKIFLIEYSGQCYSKQTYDSKSSFNNNVVKIDATISSELKLSKRLFQILKEHNAFELI NYLNHFKLNVREFSDYDNVKNLLKNKILKSYFHISFDNHPYYYSVDDLRNDIPKNYAIDSKITVDHMNYSFSPWSFEFKS TLDLLLPKVSWYSITKNIEQNSFNGQLNIENLSYEDDKLAVSSKIDYQNLAHIENKNNKLATYSILNIKDKLSFIKILLA SILNIDDEEKTNSDITAILQKMENFDFKTAMQNIAFVYTDNDMSLQKKECLAKLDYFDQIINTIAFPNQIMLNLDFELLS SSKSNIFRLNFLKILLNDFGIDIKDSLYDTTNPRFITNFYLLNFRDLVDFIIDFYNIKTIIENHIKLNSKENKIDENILQ QNQLVELNKDILKSFLSKISKPLHGSPNIRVINCHYDISNKIRIGNLDLLAIRGMYYRTLYNQVREIITKSSTPSKLILK FLPQLQQKSDLIDKLNRSPEIITQELWMEVLKSLLEAPACQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69880; Mature: 69880
Theoretical pI: Translated: 8.14; Mature: 8.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKVYIILITSIVVLLLLLISWYAVWEILANRITKTYGKRDITVYQQDSTYSTISFSTVK CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEHHHHH AITTPLSIGFDVLGVTISSISDSNISEIIKCDSPIKIRYSLASKIFLIEYSGQCYSKQTY HHHHHHHCCHHHHHHEEECCCCCCHHHHHHCCCCCEEEEEECCEEEEEEECCCCCCCCCC DSKSSFNNNVVKIDATISSELKLSKRLFQILKEHNAFELINYLNHFKLNVREFSDYDNVK CCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEHHHHCCHHHHH NLLKNKILKSYFHISFDNHPYYYSVDDLRNDIPKNYAIDSKITVDHMNYSFSPWSFEFKS HHHHHHHHHHHHEEEECCCCCEEEHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCHHHH TLDLLLPKVSWYSITKNIEQNSFNGQLNIENLSYEDDKLAVSSKIDYQNLAHIENKNNKL HHHHHHCCCHHHHHHCCCCCCCCCCEEEECCCCCCCCCEEEECCCCHHHHHHHCCCCCCE ATYSILNIKDKLSFIKILLASILNIDDEEKTNSDITAILQKMENFDFKTAMQNIAFVYTD EEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCEEEEEEC NDMSLQKKECLAKLDYFDQIINTIAFPNQIMLNLDFELLSSSKSNIFRLNFLKILLNDFG CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHCCCCCCEEEHHHHHHHHHHHC IDIKDSLYDTTNPRFITNFYLLNFRDLVDFIIDFYNIKTIIENHIKLNSKENKIDENILQ CCCCHHHCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH QNQLVELNKDILKSFLSKISKPLHGSPNIRVINCHYDISNKIRIGNLDLLAIRGMYYRTL CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCEEECCEEEEEHHHHHHHHH YNQVREIITKSSTPSKLILKFLPQLQQKSDLIDKLNRSPEIITQELWMEVLKSLLEAPAC HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC Q C >Mature Secondary Structure MRKVYIILITSIVVLLLLLISWYAVWEILANRITKTYGKRDITVYQQDSTYSTISFSTVK CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEHHHHH AITTPLSIGFDVLGVTISSISDSNISEIIKCDSPIKIRYSLASKIFLIEYSGQCYSKQTY HHHHHHHCCHHHHHHEEECCCCCCHHHHHHCCCCCEEEEEECCEEEEEEECCCCCCCCCC DSKSSFNNNVVKIDATISSELKLSKRLFQILKEHNAFELINYLNHFKLNVREFSDYDNVK CCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEHHHHCCHHHHH NLLKNKILKSYFHISFDNHPYYYSVDDLRNDIPKNYAIDSKITVDHMNYSFSPWSFEFKS HHHHHHHHHHHHEEEECCCCCEEEHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCHHHH TLDLLLPKVSWYSITKNIEQNSFNGQLNIENLSYEDDKLAVSSKIDYQNLAHIENKNNKL HHHHHHCCCHHHHHHCCCCCCCCCCEEEECCCCCCCCCEEEECCCCHHHHHHHCCCCCCE ATYSILNIKDKLSFIKILLASILNIDDEEKTNSDITAILQKMENFDFKTAMQNIAFVYTD EEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCEEEEEEC NDMSLQKKECLAKLDYFDQIINTIAFPNQIMLNLDFELLSSSKSNIFRLNFLKILLNDFG CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHCCCCCCEEEHHHHHHHHHHHC IDIKDSLYDTTNPRFITNFYLLNFRDLVDFIIDFYNIKTIIENHIKLNSKENKIDENILQ CCCCHHHCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH QNQLVELNKDILKSFLSKISKPLHGSPNIRVINCHYDISNKIRIGNLDLLAIRGMYYRTL CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCEEECCEEEEEHHHHHHHHH YNQVREIITKSSTPSKLILKFLPQLQQKSDLIDKLNRSPEIITQELWMEVLKSLLEAPAC HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC Q C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA