| Definition | Orientia tsutsugamushi Boryong, complete genome. |
|---|---|
| Accession | NC_009488 |
| Length | 2,127,051 |
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The map label for this gene is tlc [H]
Identifier: 148284166
GI number: 148284166
Start: 307658
End: 309190
Strand: Direct
Name: tlc [H]
Synonym: OTBS_0312
Alternate gene names: 148284166
Gene position: 307658-309190 (Clockwise)
Preceding gene: 148284165
Following gene: 148284167
Centisome position: 14.46
GC content: 28.44
Gene sequence:
>1533_bases ATGAACTCTTACTATTTATTGTGCTATCTTCTTTCATGGGCTGCAATTAGAAGCTCTATGTCTTTTAATCTCAGTAAAAT ATTTAATCATATATGGCCGGTACATCGATGTGAACTGCCAAGATTTTTACTGATGACTGCTTTAATGTTTTGCATACTTT TGATTCAAAATTTAATTAGAGCTTTAAAAGATAGTATAGTAATTACTATGATTGGTGCTGAAACCACTTCTTTTTTAAAA ATCTGGGGTGTATTACCAGCAGCATGCTTAATGACAATAATTTATATTAAATTAGTCAATGTTGTTAAGAATGAAAAAGT ATTTTACATCATATTATTAACATTTTTAACATTTTTTTTTGTTTTTGGATTTATTATTTTTCCAAACTACCAATACTTAC ATTTAAATGATCAAAGCATTCAAGCTCTAGTTTCTAAATTTCCACATTTTCGCTGGATTATCTTAATGTTGGCAAAATGG AGCTTTTCACTTTTTTATATTATTTCTGAATTATGGCCTAATGCTGTTTTTGCGCTATTATACTGGCAATTTGTTAATAT GGTAACTACAGTTGAGCAGTCAAGAAGATTTTATGTTTTATTTAGCTTATTTGGCCAAACTGGGTTATATATTTCTGGTA CACTGATATCCTTTTTACCCTCAATGAGTAACTACTTTATTACTCATTATGATTTACAATGCAGTAAAACTACTGTTTAT ATTCAAATTATAATATCTATTGTTTTACTACTAGGTAGTCTTTCTATGCTTATTTTTGCAATATTAAACGCTTACATAAT TAAAATTGATGATGTGAGTTTTAAGTTTAAGTCTAATAAAATGTCAATATTAGATGGCATAAAAACAGCACTTGAATCTA GATATATTAGGCTTATTATTACATTATTAATATGTTATGGCATAGCTATTAATTTAGTTGAAGCACCTTGGAAGTATAAA GCTGCTACTTTATATCAAACCCCAGAAGAATATAATGCTTTTGTTGGTTCTTATTTAAGCTATACTGGTATTTGCACTAT ACTGTTTGTTTTAGTCGGATCAAATATTGTGAGATATTTTGGGTGGAAAACAGCCGCAATGATTACTCCTATTATGTTAT TTTCAACAGGTACAATATTCTTTATAACTTCAAGCTTTAATACTTCATTTCCTTTGTTTGAGCTAATCTGCCCTGCAATT GATCCACTTAGTATAGCAATTACCACTGGAGCAACATTAAATATTTTAACCAAGTCTAGTAAATATACTTTCTTTGACTC AACTAAAGAAATGGCATATGTTCCTCTTGATAATGAGTTAAAAAGTAAAGGCAAAGCTACAGCTGACGTAATGGGAATAA AACTCGGTAAATCTGCTAGCGCATTAATTCAATCATTAACTTTTACACTTATTCCTACTGCTACTTACCAATCTATAACT CCTTATTTAATGTTTATATTTATAATAATATGTATAGTATGGATGTGGGTAATTAGAGAATTAAACAAAGAATATTTAAA GTTAATTAGCTAA
Upstream 100 bases:
>100_bases ATTTGGTTGATAATAAATTTTATTATTTATCATAATTGACTTGAATAAATAAATTCATATGATAATAATTGCTAAGATTT AATTCTTCAAACTATAAAGA
Downstream 100 bases:
>100_bases TATGCACTAGATATACTTATTTACACCATTACTTTTATAGTTTAATACTATAAAACACCAATTTTAGTCGAATATATCTT ATAATTTTGATTTTATTTGT
Product: ATP/ADP translocase
Products: NA
Alternate protein names: ADP/ATP translocase 4 [H]
Number of amino acids: Translated: 510; Mature: 510
Protein sequence:
>510_residues MNSYYLLCYLLSWAAIRSSMSFNLSKIFNHIWPVHRCELPRFLLMTALMFCILLIQNLIRALKDSIVITMIGAETTSFLK IWGVLPAACLMTIIYIKLVNVVKNEKVFYIILLTFLTFFFVFGFIIFPNYQYLHLNDQSIQALVSKFPHFRWIILMLAKW SFSLFYIISELWPNAVFALLYWQFVNMVTTVEQSRRFYVLFSLFGQTGLYISGTLISFLPSMSNYFITHYDLQCSKTTVY IQIIISIVLLLGSLSMLIFAILNAYIIKIDDVSFKFKSNKMSILDGIKTALESRYIRLIITLLICYGIAINLVEAPWKYK AATLYQTPEEYNAFVGSYLSYTGICTILFVLVGSNIVRYFGWKTAAMITPIMLFSTGTIFFITSSFNTSFPLFELICPAI DPLSIAITTGATLNILTKSSKYTFFDSTKEMAYVPLDNELKSKGKATADVMGIKLGKSASALIQSLTFTLIPTATYQSIT PYLMFIFIIICIVWMWVIRELNKEYLKLIS
Sequences:
>Translated_510_residues MNSYYLLCYLLSWAAIRSSMSFNLSKIFNHIWPVHRCELPRFLLMTALMFCILLIQNLIRALKDSIVITMIGAETTSFLK IWGVLPAACLMTIIYIKLVNVVKNEKVFYIILLTFLTFFFVFGFIIFPNYQYLHLNDQSIQALVSKFPHFRWIILMLAKW SFSLFYIISELWPNAVFALLYWQFVNMVTTVEQSRRFYVLFSLFGQTGLYISGTLISFLPSMSNYFITHYDLQCSKTTVY IQIIISIVLLLGSLSMLIFAILNAYIIKIDDVSFKFKSNKMSILDGIKTALESRYIRLIITLLICYGIAINLVEAPWKYK AATLYQTPEEYNAFVGSYLSYTGICTILFVLVGSNIVRYFGWKTAAMITPIMLFSTGTIFFITSSFNTSFPLFELICPAI DPLSIAITTGATLNILTKSSKYTFFDSTKEMAYVPLDNELKSKGKATADVMGIKLGKSASALIQSLTFTLIPTATYQSIT PYLMFIFIIICIVWMWVIRELNKEYLKLIS >Mature_510_residues MNSYYLLCYLLSWAAIRSSMSFNLSKIFNHIWPVHRCELPRFLLMTALMFCILLIQNLIRALKDSIVITMIGAETTSFLK IWGVLPAACLMTIIYIKLVNVVKNEKVFYIILLTFLTFFFVFGFIIFPNYQYLHLNDQSIQALVSKFPHFRWIILMLAKW SFSLFYIISELWPNAVFALLYWQFVNMVTTVEQSRRFYVLFSLFGQTGLYISGTLISFLPSMSNYFITHYDLQCSKTTVY IQIIISIVLLLGSLSMLIFAILNAYIIKIDDVSFKFKSNKMSILDGIKTALESRYIRLIITLLICYGIAINLVEAPWKYK AATLYQTPEEYNAFVGSYLSYTGICTILFVLVGSNIVRYFGWKTAAMITPIMLFSTGTIFFITSSFNTSFPLFELICPAI DPLSIAITTGATLNILTKSSKYTFFDSTKEMAYVPLDNELKSKGKATADVMGIKLGKSASALIQSLTFTLIPTATYQSIT PYLMFIFIIICIVWMWVIRELNKEYLKLIS
Specific function: Provides the rickettsial cell with host ATP in exchange for rickettsial ADP. This is an obligate exchange system. This energy acquiring activity is an important component of rickettsial parasitism [H]
COG id: COG3202
COG function: function code C; ATP/ADP translocase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ADP/ATP translocase tlc family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004667 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58486; Mature: 58486
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSYYLLCYLLSWAAIRSSMSFNLSKIFNHIWPVHRCELPRFLLMTALMFCILLIQNLIR CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHH ALKDSIVITMIGAETTSFLKIWGVLPAACLMTIIYIKLVNVVKNEKVFYIILLTFLTFFF HHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH VFGFIIFPNYQYLHLNDQSIQALVSKFPHFRWIILMLAKWSFSLFYIISELWPNAVFALL HHHHHHCCCCEEEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YWQFVNMVTTVEQSRRFYVLFSLFGQTGLYISGTLISFLPSMSNYFITHYDLQCSKTTVY HHHHHHHHHHHHHCCCEEEEEEHHCCCCCEEHHHHHHHHHHHHCCEEEEEEEEECCHHHH IQIIISIVLLLGSLSMLIFAILNAYIIKIDDVSFKFKSNKMSILDGIKTALESRYIRLII HHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHHH TLLICYGIAINLVEAPWKYKAATLYQTPEEYNAFVGSYLSYTGICTILFVLVGSNIVRYF HHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH GWKTAAMITPIMLFSTGTIFFITSSFNTSFPLFELICPAIDPLSIAITTGATLNILTKSS CCHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHCCCCCCEEEEECCCEEEEEECCC KYTFFDSTKEMAYVPLDNELKSKGKATADVMGIKLGKSASALIQSLTFTLIPTATYQSIT CEEEEECCCCEEEECCCHHHHHCCCCHHHHHEEECCCHHHHHHHHHHHHHCCCCHHHHHH PYLMFIFIIICIVWMWVIRELNKEYLKLIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNSYYLLCYLLSWAAIRSSMSFNLSKIFNHIWPVHRCELPRFLLMTALMFCILLIQNLIR CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHH ALKDSIVITMIGAETTSFLKIWGVLPAACLMTIIYIKLVNVVKNEKVFYIILLTFLTFFF HHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH VFGFIIFPNYQYLHLNDQSIQALVSKFPHFRWIILMLAKWSFSLFYIISELWPNAVFALL HHHHHHCCCCEEEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YWQFVNMVTTVEQSRRFYVLFSLFGQTGLYISGTLISFLPSMSNYFITHYDLQCSKTTVY HHHHHHHHHHHHHCCCEEEEEEHHCCCCCEEHHHHHHHHHHHHCCEEEEEEEEECCHHHH IQIIISIVLLLGSLSMLIFAILNAYIIKIDDVSFKFKSNKMSILDGIKTALESRYIRLII HHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHHH TLLICYGIAINLVEAPWKYKAATLYQTPEEYNAFVGSYLSYTGICTILFVLVGSNIVRYF HHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH GWKTAAMITPIMLFSTGTIFFITSSFNTSFPLFELICPAIDPLSIAITTGATLNILTKSS CCHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHCCCCCCEEEEECCCEEEEEECCC KYTFFDSTKEMAYVPLDNELKSKGKATADVMGIKLGKSASALIQSLTFTLIPTATYQSIT CEEEEECCCCEEEECCCHHHHHCCCCHHHHHEEECCCHHHHHHHHHHHHHCCCCHHHHHH PYLMFIFIIICIVWMWVIRELNKEYLKLIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA