| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148261099
Identifier: 148261099
GI number: 148261099
Start: 2335973
End: 2337181
Strand: Reverse
Name: 148261099
Synonym: Acry_2108
Alternate gene names: NA
Gene position: 2337181-2335973 (Counterclockwise)
Preceding gene: 148261102
Following gene: 148261098
Centisome position: 68.96
GC content: 63.36
Gene sequence:
>1209_bases ATGACCGACGACAGACTACCCTTGGCTGAATTGCTGGCGAAAGCCGGCGATGGAGATTTCCTGCGCAGTGTGGCGGAGGC CGTAGTGCAACTGCTTATGGAGGCCGACGTGGAAGGCCTGATCGGCGCCGGGCGCCATGAGCGCACTGGTGAGCGGACGA CCTACCGCAACGGTTACCGCGATCGCTCCCTCGACACCCGGCTCGGCAATCTGCAACTGCGCATTCCCAAGCTGCGGCAG GGCTCTTACTTTCCGCCCTTCCTCGAGCCTAGGAAGACGTCCGAGAAGGCCCTGGTCGCGGTGATCCAGGAAGCCTGGGT TGGCGGCGTCTCCACCCGACGCGTCGACGACCTGGTGCAGGCCATGGGGCTGAGTGGCATAGGCAAGAGCACGGTGAGCA AGCTGTGCAAGGATATCGACGAGCGGGTGAACGCCTTCCTCGAGCGCCCGCTGACCGGTGACTGGCCGTATCTTTGGCTC GACGCCACCTACCTCAAGCAGCGCGAGGGAGGGCGCATCGTCTCGGTGGCTGCGATAATCGCCGTGGCCGCTAACACCGA AGGCAAGCGCGAGATCGTCGGGCTGCACATCGGCCCCAGCGAGGCCGAGACCTTCTGGGCTGCCTTCCTCAAGAGCTTGG TGCGCCGCGGTCTGCGTCAGGTAAAGCTGGTCATCTCCGACGCGCACGAGGGCCTCAAGTCCGCAATCCGCCGCGTCATG GGCGCGTCCTGGCAACGATGCCGCGTTCACTGGATGCGCAATGCCCTGGCCTATGTCGGCAAGGGCCAGCAGAGCATGGT CTCGGCGGCGCTCCGCCAAGCCTTCATTCAGCCTGACCGTGCCGGCGCTAGCCAGACGCTACGCCACACCGCCGACCAGT TCCGCGCCAAATGGCCCAAGCTCGCCGCATTTATCGATGATAGCGAGGTCGATGTCCTCGCCCACATGGACTTCCCCGTG CAACACAGGGTCAAGATCCACTCTACCAACCCGATCGAACGCCTGAACAAGGAGGTCAAGCGGCGCGCTGATGTCGTCGG CATCTTTCCAAACGAAGCCGCCATCATCAGGCTCGTGGGCGCCGTGCTCCTCGAGCAGAATGACGAGTGGCAAACACAAA ATCGCTACATGCAGACCGAGCCAATGGCCGAACTTACACCGCCCGCAATCGACGTATTTCCACCCCAGATCGCCACCGCA GCCGAATGA
Upstream 100 bases:
>100_bases CGGAGGGGCCGATCCAACGCATGAGCCTGGGTTTAGGTGGCCATCGGATCGAGCGGCTACGGTGGAGTTGCGAAGCTTCA CCCGAACCCGAGAGGACCCG
Downstream 100 bases:
>100_bases TCCTTGGTCACCTTAAACCATCTATAATTTCCACCACGTTGACGGACGTGACCGTTTTTGATCTGAGGAAACCTTTCCGT GAAGCTGCCATGACAAAATC
Product: transposase, mutator type
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MTDDRLPLAELLAKAGDGDFLRSVAEAVVQLLMEADVEGLIGAGRHERTGERTTYRNGYRDRSLDTRLGNLQLRIPKLRQ GSYFPPFLEPRKTSEKALVAVIQEAWVGGVSTRRVDDLVQAMGLSGIGKSTVSKLCKDIDERVNAFLERPLTGDWPYLWL DATYLKQREGGRIVSVAAIIAVAANTEGKREIVGLHIGPSEAETFWAAFLKSLVRRGLRQVKLVISDAHEGLKSAIRRVM GASWQRCRVHWMRNALAYVGKGQQSMVSAALRQAFIQPDRAGASQTLRHTADQFRAKWPKLAAFIDDSEVDVLAHMDFPV QHRVKIHSTNPIERLNKEVKRRADVVGIFPNEAAIIRLVGAVLLEQNDEWQTQNRYMQTEPMAELTPPAIDVFPPQIATA AE
Sequences:
>Translated_402_residues MTDDRLPLAELLAKAGDGDFLRSVAEAVVQLLMEADVEGLIGAGRHERTGERTTYRNGYRDRSLDTRLGNLQLRIPKLRQ GSYFPPFLEPRKTSEKALVAVIQEAWVGGVSTRRVDDLVQAMGLSGIGKSTVSKLCKDIDERVNAFLERPLTGDWPYLWL DATYLKQREGGRIVSVAAIIAVAANTEGKREIVGLHIGPSEAETFWAAFLKSLVRRGLRQVKLVISDAHEGLKSAIRRVM GASWQRCRVHWMRNALAYVGKGQQSMVSAALRQAFIQPDRAGASQTLRHTADQFRAKWPKLAAFIDDSEVDVLAHMDFPV QHRVKIHSTNPIERLNKEVKRRADVVGIFPNEAAIIRLVGAVLLEQNDEWQTQNRYMQTEPMAELTPPAIDVFPPQIATA AE >Mature_401_residues TDDRLPLAELLAKAGDGDFLRSVAEAVVQLLMEADVEGLIGAGRHERTGERTTYRNGYRDRSLDTRLGNLQLRIPKLRQG SYFPPFLEPRKTSEKALVAVIQEAWVGGVSTRRVDDLVQAMGLSGIGKSTVSKLCKDIDERVNAFLERPLTGDWPYLWLD ATYLKQREGGRIVSVAAIIAVAANTEGKREIVGLHIGPSEAETFWAAFLKSLVRRGLRQVKLVISDAHEGLKSAIRRVMG ASWQRCRVHWMRNALAYVGKGQQSMVSAALRQAFIQPDRAGASQTLRHTADQFRAKWPKLAAFIDDSEVDVLAHMDFPVQ HRVKIHSTNPIERLNKEVKRRADVVGIFPNEAAIIRLVGAVLLEQNDEWQTQNRYMQTEPMAELTPPAIDVFPPQIATAA E
Specific function: Required for the transposition of the insertion element [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase mutator family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001207 [H]
Pfam domain/function: PF00872 Transposase_mut [H]
EC number: NA
Molecular weight: Translated: 44875; Mature: 44744
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDDRLPLAELLAKAGDGDFLRSVAEAVVQLLMEADVEGLIGAGRHERTGERTTYRNGYR CCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCHHCCCCC DRSLDTRLGNLQLRIPKLRQGSYFPPFLEPRKTSEKALVAVIQEAWVGGVSTRRVDDLVQ CCCHHHHHCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH AMGLSGIGKSTVSKLCKDIDERVNAFLERPLTGDWPYLWLDATYLKQREGGRIVSVAAII HHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHCCCCCEEHHHHHH AVAANTEGKREIVGLHIGPSEAETFWAAFLKSLVRRGLRQVKLVISDAHEGLKSAIRRVM HHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GASWQRCRVHWMRNALAYVGKGQQSMVSAALRQAFIQPDRAGASQTLRHTADQFRAKWPK CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHH LAAFIDDSEVDVLAHMDFPVQHRVKIHSTNPIERLNKEVKRRADVVGIFPNEAAIIRLVG HHHEECCCCCEEEEECCCCHHCEEEECCCCHHHHHHHHHHHHCCEEEECCCHHHHHHHHH AVLLEQNDEWQTQNRYMQTEPMAELTPPAIDVFPPQIATAAE HHHHCCCCCHHHHCCCCCCCCCHHCCCCCCCCCCCCHHCCCC >Mature Secondary Structure TDDRLPLAELLAKAGDGDFLRSVAEAVVQLLMEADVEGLIGAGRHERTGERTTYRNGYR CCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCCHHCCCCC DRSLDTRLGNLQLRIPKLRQGSYFPPFLEPRKTSEKALVAVIQEAWVGGVSTRRVDDLVQ CCCHHHHHCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH AMGLSGIGKSTVSKLCKDIDERVNAFLERPLTGDWPYLWLDATYLKQREGGRIVSVAAII HHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHCCCCCEEHHHHHH AVAANTEGKREIVGLHIGPSEAETFWAAFLKSLVRRGLRQVKLVISDAHEGLKSAIRRVM HHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GASWQRCRVHWMRNALAYVGKGQQSMVSAALRQAFIQPDRAGASQTLRHTADQFRAKWPK CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHH LAAFIDDSEVDVLAHMDFPVQHRVKIHSTNPIERLNKEVKRRADVVGIFPNEAAIIRLVG HHHEECCCCCEEEEECCCCHHCEEEECCCCHHHHHHHHHHHHCCEEEECCCHHHHHHHHH AVLLEQNDEWQTQNRYMQTEPMAELTPPAIDVFPPQIATAAE HHHHCCCCCHHHHCCCCCCCCCHHCCCCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1663885; 12788972 [H]