Click here to switch to the map view.

The map label for this gene is 148261098

Identifier: 148261098

GI number: 148261098

Start: 2335381

End: 2335761

Strand: Reverse

Name: 148261098

Synonym: Acry_2107

Alternate gene names: NA

Gene position: 2335761-2335381 (Counterclockwise)

Preceding gene: 148261099

Following gene: 148261095

Centisome position: 68.92

GC content: 71.13

Gene sequence:

>381_bases
ATGGACAAGGATGAGATCGAAGGTGGAGCCCGCGCTTTTGCAGGCAAGGCCGAGGAAGCTCTTGGCGAGGCGACCGGCGA
CGAGGATTTGCAGCGGGAAGGAATGCGCCACCAGGCCGCGGGCGAAGCGCAGAAGCTCTTTGGCGCGGCCAAGGATGCCG
CGCGCTCGGCAAGCCATACGGCAGGGGCCGCTTTCGAGTCCGTGCGTGACTCGGTGGCGGGAGGTGCCGGCCGGGCGCCG
GAGGATCGGGCGGCGGCGCCGGCGAGTGACGGCGCGGCATGGGTGGCGGACTTCGTGCGCGAACAGCCCGTTCTCGCCCT
GTTCGGCGCCGCGACGCTCGGCTACGCGCTGGCCTTCCTCTTCCACGGGGGGCGGCGCTGA

Upstream 100 bases:

>100_bases
CCTAGGCGATCAGGAAAGGCGAGATACACCGGCTTGTCCGGGATGGCTTCGGCCCCCATCTCCCGAGTTCTGATCCGACA
TGCCGAAGGAGGAAAACCCG

Downstream 100 bases:

>100_bases
GGCCGCAGGATCAGCACCATCGAGACGAACAGGGCGGCAAAGCCCATTGCATCGCCCCGGGTGAACGGTTCTGCCAGAAC
GAGCACGCCCATCAAGGTGG

Product: CsbD family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MDKDEIEGGARAFAGKAEEALGEATGDEDLQREGMRHQAAGEAQKLFGAAKDAARSASHTAGAAFESVRDSVAGGAGRAP
EDRAAAPASDGAAWVADFVREQPVLALFGAATLGYALAFLFHGGRR

Sequences:

>Translated_126_residues
MDKDEIEGGARAFAGKAEEALGEATGDEDLQREGMRHQAAGEAQKLFGAAKDAARSASHTAGAAFESVRDSVAGGAGRAP
EDRAAAPASDGAAWVADFVREQPVLALFGAATLGYALAFLFHGGRR
>Mature_126_residues
MDKDEIEGGARAFAGKAEEALGEATGDEDLQREGMRHQAAGEAQKLFGAAKDAARSASHTAGAAFESVRDSVAGGAGRAP
EDRAAAPASDGAAWVADFVREQPVLALFGAATLGYALAFLFHGGRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0337 (CsbD) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008462 [H]

Pfam domain/function: PF05532 CsbD [H]

EC number: NA

Molecular weight: Translated: 12903; Mature: 12903

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKDEIEGGARAFAGKAEEALGEATGDEDLQREGMRHQAAGEAQKLFGAAKDAARSASHT
CCCHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGAAFESVRDSVAGGAGRAPEDRAAAPASDGAAWVADFVREQPVLALFGAATLGYALAFL
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
FHGGRR
HHCCCC
>Mature Secondary Structure
MDKDEIEGGARAFAGKAEEALGEATGDEDLQREGMRHQAAGEAQKLFGAAKDAARSASHT
CCCHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGAAFESVRDSVAGGAGRAPEDRAAAPASDGAAWVADFVREQPVLALFGAATLGYALAFL
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
FHGGRR
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]