Definition Acidiphilium cryptum JF-5 chromosome, complete genome.
Accession NC_009484
Length 3,389,227

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The map label for this gene is 148260833

Identifier: 148260833

GI number: 148260833

Start: 2031312

End: 2031758

Strand: Reverse

Name: 148260833

Synonym: Acry_1839

Alternate gene names: NA

Gene position: 2031758-2031312 (Counterclockwise)

Preceding gene: 148260834

Following gene: 148260826

Centisome position: 59.95

GC content: 65.77

Gene sequence:

>447_bases
ATGACGGTGCCGGCGCTGTTGCCCTTCCTGCGCGAGATGCTGGCGCTACACGTGATCGCGGTGATCTTGTGGATGGCGGG
GATGATCGTGCTGCCCATGATCTATCTGCGCCATCATGGGCTGGAGCCGGCGAGCCCGGCGGCGATGGCGTTCGCGGCCC
TCGAGCGCCAGATCTTCAAGCGCCTGGTCAATCCCGCGATGTATGCGGCCTGGGGGTTCGGCATCCTGCTTGCGTTGACG
CCCGGCACGATATCCTGGAGCGCACCGTGGTGGCTGGTGAAATTGGCCGCCGTGCTGCTGCTCTCCTGGTACCATGGCAT
TCTCTCCGCCTGGCGCCGGCGGCTGCGCGACGATGCCCGGCCGGAGGTGACAATCCTGAGGCGGAGCGCGGTTGTCCCGA
TCGTCCTGATGGTCGTGATCGTCACGATGGTGCTGGTTCGGCCATGA

Upstream 100 bases:

>100_bases
GGCCGAATATCACCCGCAAGGGAACCCCGCCAGAGGACGCCGACGCGTGGAAGGACAGGCCTGGCAAGGCCGCATCGCTC
TCGAGGGAGCCGGGCACGCC

Downstream 100 bases:

>100_bases
GGCGCCGAATATAGCCCGCCTGCGTTATCGCCTGGTCATGGTGGCGACGCACGCAGACGGGTTCAGCTAAAATTCAAAAT
GCAACCGTGCTGCGAGAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MTVPALLPFLREMLALHVIAVILWMAGMIVLPMIYLRHHGLEPASPAAMAFAALERQIFKRLVNPAMYAAWGFGILLALT
PGTISWSAPWWLVKLAAVLLLSWYHGILSAWRRRLRDDARPEVTILRRSAVVPIVLMVVIVTMVLVRP

Sequences:

>Translated_148_residues
MTVPALLPFLREMLALHVIAVILWMAGMIVLPMIYLRHHGLEPASPAAMAFAALERQIFKRLVNPAMYAAWGFGILLALT
PGTISWSAPWWLVKLAAVLLLSWYHGILSAWRRRLRDDARPEVTILRRSAVVPIVLMVVIVTMVLVRP
>Mature_147_residues
TVPALLPFLREMLALHVIAVILWMAGMIVLPMIYLRHHGLEPASPAAMAFAALERQIFKRLVNPAMYAAWGFGILLALTP
GTISWSAPWWLVKLAAVLLLSWYHGILSAWRRRLRDDARPEVTILRRSAVVPIVLMVVIVTMVLVRP

Specific function: Unknown

COG id: COG1981

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0093 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014351
- InterPro:   IPR005265 [H]

Pfam domain/function: PF03653 UPF0093 [H]

EC number: NA

Molecular weight: Translated: 16656; Mature: 16524

Theoretical pI: Translated: 11.85; Mature: 11.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVPALLPFLREMLALHVIAVILWMAGMIVLPMIYLRHHGLEPASPAAMAFAALERQIFK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
RLVNPAMYAAWGFGILLALTPGTISWSAPWWLVKLAAVLLLSWYHGILSAWRRRLRDDAR
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PEVTILRRSAVVPIVLMVVIVTMVLVRP
CHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TVPALLPFLREMLALHVIAVILWMAGMIVLPMIYLRHHGLEPASPAAMAFAALERQIFK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
RLVNPAMYAAWGFGILLALTPGTISWSAPWWLVKLAAVLLLSWYHGILSAWRRRLRDDAR
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PEVTILRRSAVVPIVLMVVIVTMVLVRP
CHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8606169 [H]