| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
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The map label for this gene is 148260833
Identifier: 148260833
GI number: 148260833
Start: 2031312
End: 2031758
Strand: Reverse
Name: 148260833
Synonym: Acry_1839
Alternate gene names: NA
Gene position: 2031758-2031312 (Counterclockwise)
Preceding gene: 148260834
Following gene: 148260826
Centisome position: 59.95
GC content: 65.77
Gene sequence:
>447_bases ATGACGGTGCCGGCGCTGTTGCCCTTCCTGCGCGAGATGCTGGCGCTACACGTGATCGCGGTGATCTTGTGGATGGCGGG GATGATCGTGCTGCCCATGATCTATCTGCGCCATCATGGGCTGGAGCCGGCGAGCCCGGCGGCGATGGCGTTCGCGGCCC TCGAGCGCCAGATCTTCAAGCGCCTGGTCAATCCCGCGATGTATGCGGCCTGGGGGTTCGGCATCCTGCTTGCGTTGACG CCCGGCACGATATCCTGGAGCGCACCGTGGTGGCTGGTGAAATTGGCCGCCGTGCTGCTGCTCTCCTGGTACCATGGCAT TCTCTCCGCCTGGCGCCGGCGGCTGCGCGACGATGCCCGGCCGGAGGTGACAATCCTGAGGCGGAGCGCGGTTGTCCCGA TCGTCCTGATGGTCGTGATCGTCACGATGGTGCTGGTTCGGCCATGA
Upstream 100 bases:
>100_bases GGCCGAATATCACCCGCAAGGGAACCCCGCCAGAGGACGCCGACGCGTGGAAGGACAGGCCTGGCAAGGCCGCATCGCTC TCGAGGGAGCCGGGCACGCC
Downstream 100 bases:
>100_bases GGCGCCGAATATAGCCCGCCTGCGTTATCGCCTGGTCATGGTGGCGACGCACGCAGACGGGTTCAGCTAAAATTCAAAAT GCAACCGTGCTGCGAGAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: ORF1 [H]
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MTVPALLPFLREMLALHVIAVILWMAGMIVLPMIYLRHHGLEPASPAAMAFAALERQIFKRLVNPAMYAAWGFGILLALT PGTISWSAPWWLVKLAAVLLLSWYHGILSAWRRRLRDDARPEVTILRRSAVVPIVLMVVIVTMVLVRP
Sequences:
>Translated_148_residues MTVPALLPFLREMLALHVIAVILWMAGMIVLPMIYLRHHGLEPASPAAMAFAALERQIFKRLVNPAMYAAWGFGILLALT PGTISWSAPWWLVKLAAVLLLSWYHGILSAWRRRLRDDARPEVTILRRSAVVPIVLMVVIVTMVLVRP >Mature_147_residues TVPALLPFLREMLALHVIAVILWMAGMIVLPMIYLRHHGLEPASPAAMAFAALERQIFKRLVNPAMYAAWGFGILLALTP GTISWSAPWWLVKLAAVLLLSWYHGILSAWRRRLRDDARPEVTILRRSAVVPIVLMVVIVTMVLVRP
Specific function: Unknown
COG id: COG1981
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0093 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014351 - InterPro: IPR005265 [H]
Pfam domain/function: PF03653 UPF0093 [H]
EC number: NA
Molecular weight: Translated: 16656; Mature: 16524
Theoretical pI: Translated: 11.85; Mature: 11.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVPALLPFLREMLALHVIAVILWMAGMIVLPMIYLRHHGLEPASPAAMAFAALERQIFK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH RLVNPAMYAAWGFGILLALTPGTISWSAPWWLVKLAAVLLLSWYHGILSAWRRRLRDDAR HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PEVTILRRSAVVPIVLMVVIVTMVLVRP CHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TVPALLPFLREMLALHVIAVILWMAGMIVLPMIYLRHHGLEPASPAAMAFAALERQIFK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH RLVNPAMYAAWGFGILLALTPGTISWSAPWWLVKLAAVLLLSWYHGILSAWRRRLRDDAR HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PEVTILRRSAVVPIVLMVVIVTMVLVRP CHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8606169 [H]