| Definition | Acidiphilium cryptum JF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009484 |
| Length | 3,389,227 |
Click here to switch to the map view.
The map label for this gene is 148260809
Identifier: 148260809
GI number: 148260809
Start: 2000148
End: 2000456
Strand: Reverse
Name: 148260809
Synonym: Acry_1815
Alternate gene names: NA
Gene position: 2000456-2000148 (Counterclockwise)
Preceding gene: 148260810
Following gene: 148260808
Centisome position: 59.02
GC content: 58.58
Gene sequence:
>309_bases ATGACCTCGTCCATCATAGTGACTAGGGCCGCCCAATACGTCTCGCTCCACTACACTGAACGCCTGGCCGAAGCAGGGAT CGAGCCTTCCGTCGGCAGCGTCGGCGATTCCTATGACAATGCCCTCTCTGAAACCATCAACGGCCAATTCAAGGCCGAGG TAATCCACCGTCGTGGCCCTTGGCGGAACGCAGAAGTGGTGGAATTCGCCGCGCTCGAATGGGTGGACTGGATCAACAAC CGCCTCTTCCTCGAGCCGATCGCGATATCCCATCTGCCGAGGCCGAGGCGCAGTACTATGAGAAACTGA
Upstream 100 bases:
>100_bases GATTGACGCGAAAGCCGGGATGCTGACGCATGCCGGAATCCGCGCCCTGCTTGAAAAGAATTCACTGCTGGCACGAATGT GAGGTGGTTGATACGCCGGG
Downstream 100 bases:
>100_bases ACAAGCTGGCTATGGTCGCCTGAGTCAAACAAAATAGCCTTCGGCAAACCCGGCGCGGTTCAAGCTTCTCGAAGTGTGCC GCGTCTGAGCCAGTCGTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MTSSIIVTRAAQYVSLHYTERLAEAGIEPSVGSVGDSYDNALSETINGQFKAEVIHRRGPWRNAEVVEFAALEWVDWINN RLFLEPIAISHLPRPRRSTMRN
Sequences:
>Translated_102_residues MTSSIIVTRAAQYVSLHYTERLAEAGIEPSVGSVGDSYDNALSETINGQFKAEVIHRRGPWRNAEVVEFAALEWVDWINN RLFLEPIAISHLPRPRRSTMRN >Mature_101_residues TSSIIVTRAAQYVSLHYTERLAEAGIEPSVGSVGDSYDNALSETINGQFKAEVIHRRGPWRNAEVVEFAALEWVDWINNR LFLEPIAISHLPRPRRSTMRN
Specific function: Involved in the transposition of the insertion sequence [H]
COG id: COG2801
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 integrase catalytic domain [H]
Homologues:
Organism=Homo sapiens, GI310129419, Length=47, Percent_Identity=59.5744680851064, Blast_Score=63, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001584 - InterPro: IPR012337 [H]
Pfam domain/function: PF00665 rve [H]
EC number: NA
Molecular weight: Translated: 11581; Mature: 11450
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSIIVTRAAQYVSLHYTERLAEAGIEPSVGSVGDSYDNALSETINGQFKAEVIHRRGP CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCC WRNAEVVEFAALEWVDWINNRLFLEPIAISHLPRPRRSTMRN CCCCHHHHHHHHHHHHHHCCEEEECHHHHHCCCCCCCCCCCC >Mature Secondary Structure TSSIIVTRAAQYVSLHYTERLAEAGIEPSVGSVGDSYDNALSETINGQFKAEVIHRRGP CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCC WRNAEVVEFAALEWVDWINNRLFLEPIAISHLPRPRRSTMRN CCCCHHHHHHHHHHHHHHCCEEEECHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2159625; 2824781 [H]