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The map label for this gene is secB

Identifier: 148260783

GI number: 148260783

Start: 1971057

End: 1971557

Strand: Reverse

Name: secB

Synonym: Acry_1788

Alternate gene names: 148260783

Gene position: 1971557-1971057 (Counterclockwise)

Preceding gene: 148260786

Following gene: 148260782

Centisome position: 58.17

GC content: 67.27

Gene sequence:

>501_bases
ATGTCCGAAACGCAGATCGCGCCGCTCACGCTCAACATCCAGTACACGAAGGACCTGTCCTTCGAGGTTCCCGGTGCGCC
GGCGATCTATACGCTCCTCCGCCAGGCTCCGACCGTGAACATCAACCTCGACGTTCAGGTCCAGCGCCTGCAGGACGACG
CCCATGTCTACGAGGTGACGCTGACCACCCGCGCGGAAGCGACCCATCCGGCCCCGGCCGAAAGCGGCAACGGCGCCGAG
GGCGGCAAGGACCTCACCGTGTTCATCGCCGACCTGTCCTATGCCGGCGTGTTCACCCTGACCGGCATTCCGGACAACCA
GATCGAGCCCGTGCTGCTCGTCGAATGCCCGCGCCTGCTGTTCCCCTTCGCCCGCAACATCCTCGCCGATGTCACCCGCG
ATGGCGGCTTCCCGCCGGTGATGCTCGGCCCGGTGGATTTCGTCGGCCTCTGGCAGGCCCGCCGCGCCCAGGACGACGGC
GAGACGATCGCCAACGCCTGA

Upstream 100 bases:

>100_bases
AACACGCTCCTGGTCATGGCGCAAGCTCCTTGTCGCGTCATGCTGGCACCAAACGCGCCCCTGTGCTAGGCGGGCCATCA
GTCAAATGGAGCCACCACCA

Downstream 100 bases:

>100_bases
TCCGCAGCGGCGCCGCCGCGCGCGGCGCCGCCCGCTGACGCCTTTCCAGGAACGACCTGCCGATGCGCTACGTCTCCACC
CGCGGTGCGGCCCCGTCCCG

Product: preprotein translocase subunit SecB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MSETQIAPLTLNIQYTKDLSFEVPGAPAIYTLLRQAPTVNINLDVQVQRLQDDAHVYEVTLTTRAEATHPAPAESGNGAE
GGKDLTVFIADLSYAGVFTLTGIPDNQIEPVLLVECPRLLFPFARNILADVTRDGGFPPVMLGPVDFVGLWQARRAQDDG
ETIANA

Sequences:

>Translated_166_residues
MSETQIAPLTLNIQYTKDLSFEVPGAPAIYTLLRQAPTVNINLDVQVQRLQDDAHVYEVTLTTRAEATHPAPAESGNGAE
GGKDLTVFIADLSYAGVFTLTGIPDNQIEPVLLVECPRLLFPFARNILADVTRDGGFPPVMLGPVDFVGLWQARRAQDDG
ETIANA
>Mature_165_residues
SETQIAPLTLNIQYTKDLSFEVPGAPAIYTLLRQAPTVNINLDVQVQRLQDDAHVYEVTLTTRAEATHPAPAESGNGAEG
GKDLTVFIADLSYAGVFTLTGIPDNQIEPVLLVECPRLLFPFARNILADVTRDGGFPPVMLGPVDFVGLWQARRAQDDGE
TIANA

Specific function: One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its r

COG id: COG1952

COG function: function code U; Preprotein translocase subunit SecB

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secB family

Homologues:

Organism=Escherichia coli, GI1790038, Length=163, Percent_Identity=35.5828220858896, Blast_Score=91, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SECB_ACICJ (A5FZF9)

Other databases:

- EMBL:   CP000697
- RefSeq:   YP_001234910.1
- ProteinModelPortal:   A5FZF9
- SMR:   A5FZF9
- STRING:   A5FZF9
- GeneID:   5162588
- GenomeReviews:   CP000697_GR
- KEGG:   acr:Acry_1788
- eggNOG:   COG1952
- HOGENOM:   HBG294212
- OMA:   DGETIAN
- ProtClustDB:   PRK05751
- BioCyc:   ACRY349163:ACRY_1788-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00821
- InterPro:   IPR003708
- Gene3D:   G3DSA:3.10.420.10
- TIGRFAMs:   TIGR00809

Pfam domain/function: PF02556 SecB; SSF54611 SecB

EC number: NA

Molecular weight: Translated: 17962; Mature: 17830

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETQIAPLTLNIQYTKDLSFEVPGAPAIYTLLRQAPTVNINLDVQVQRLQDDAHVYEVT
CCCCEEEEEEEEEEEECCCCEECCCCHHHHHHHHCCCEEEEEEEEEEEEECCCCEEEEEE
LTTRAEATHPAPAESGNGAEGGKDLTVFIADLSYAGVFTLTGIPDNQIEPVLLVECPRLL
EEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEECCCCCCCCCEEEEEECCHHH
FPFARNILADVTRDGGFPPVMLGPVDFVGLWQARRAQDDGETIANA
HHHHHHHHHHHHCCCCCCCEEECCCCCEEHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SETQIAPLTLNIQYTKDLSFEVPGAPAIYTLLRQAPTVNINLDVQVQRLQDDAHVYEVT
CCCEEEEEEEEEEEECCCCEECCCCHHHHHHHHCCCEEEEEEEEEEEEECCCCEEEEEE
LTTRAEATHPAPAESGNGAEGGKDLTVFIADLSYAGVFTLTGIPDNQIEPVLLVECPRLL
EEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEECCCCCCCCCEEEEEECCHHH
FPFARNILADVTRDGGFPPVMLGPVDFVGLWQARRAQDDGETIANA
HHHHHHHHHHHHCCCCCCCEEECCCCCEEHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA