Definition Acidiphilium cryptum JF-5 chromosome, complete genome.
Accession NC_009484
Length 3,389,227

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The map label for this gene is 148260758

Identifier: 148260758

GI number: 148260758

Start: 1945426

End: 1946976

Strand: Reverse

Name: 148260758

Synonym: Acry_1763

Alternate gene names: NA

Gene position: 1946976-1945426 (Counterclockwise)

Preceding gene: 148260759

Following gene: 148260757

Centisome position: 57.45

GC content: 69.31

Gene sequence:

>1551_bases
ATGTCCGATGTGACAATACCTTCTGGTGATACGCTGATTCTCAATGCATCGCTGACCAGCAACTTTTCATTTCCAACGAC
GGGGTCGGCCCCGACCGATCTCGTCATCGAGCCGTCCGCCCTTTCCGTAACCCTCGTGGGGATCACGACGGCCGTCACCG
CGATCGAACTGGGCGGCAACATCCAGCATTTCGGACCGAACGACACGATCGTCCTGGCCGATGCCACGACCGACTTCTCC
AATTTCGACACCTCGCCCTCGGCGCCGAGCGATGTCATGACGTTCCAAAATATCGCCAGCCTCGCCGTGAGCCAGGATTT
CAGGATTTACGCCTCGGATGGTCTGATCATCACCGACAGTCCCCTCATCAACCTCGAGTACGGACCGACACTGAATACGT
CACTCGCGCCGTTCATCAACGCGATCGAGCAGTCCATGTTCGGCAGCATCCCTTCCACCGGCACGCTGACCATCTCGGTC
GGCCTTAGCGATTTCGGCGACTCCTCGGCCGAACCCGGCCCTCCGTCCGAGTCCGGCGGATACGCCTTCACCATCACCAC
GGGCAGCGACATCAACCCCTGCTTCGCCGCCGGCACGCAGATCCGCACCCCGGCCGGCGAGACCCCGGTCGAATCCTTGC
GGGCCGGCGATGCCGTCCTCACCGCCACCGGCGCCGAACGCCGCGTGGTCTGGATCGGCCGCCGCACGCTCGACCTCAGC
CGCCATCCGCGCCCCGAACTGGTCCGCCCGGTCCGCATCGCCGCCGGCGCGCTGGCCGATGGCGTCCCCGCGCGCGACCT
CGTGGTCTCGCCCGACCACGCCCTGTTCCTCGACGGCGTGCTGGTCCAGGCGAAGGATCTGGTCGACGGCACCATGATCG
CACCCGACCGCCGAATTTCCCGCGTCACCTATTTCCATGTCGAGCTCGACCGGCACGACATCCTGCTGGCCGAGGGCGCG
CCGGCGGAAAGCTTCCTCGATACCGGCCATCGCGGCCTGTTCGAGAACGCCGGCGAACCGATCACCCTGCACCCCGACCT
GATGCAGGCCCGGCGCGAGGCCGAAGGCTGCGCCCCGCTGGTCACCGGCGGCGACGCCCTGGCCGCGATCCGCGCCCGCC
TCGCCGCGCGCCGCGCCGCGCAGGGCTTCGCCCTGGTCCGCGTCCGCCCCGCGCTCCGCCATGGCGACCTGATCATCGAG
GCCAGCGAGGAGAAGCCCGGCACGTTCCGCTTCGCCCTGCCCGCGAACGCGACCGAATTCGAACTCCTCGCCGGCACCTT
CGTCCCCGCCGAGGTCGACCCGGTCTCCACCGACCGCCGCCGCCTCGGCCTGTCGGTTGCCGGCCTCGCGCTGGACGGCG
CGGCGCTCGACCTCGAAACCGCGATCCCAGCACCCGGCCGCCTGCCGCGCGCGGGCGGCGATGCCGGAGTCTGGACAAGC
GGCAACGCCGGCATCCGCCTGCCCCGCGCCGGCGCCGAACTGGTGCTGACGCTGACCGCCCAAGCCCTGTTCTGGACCGC
GCCGGCCGCCATGCGGCGCGCCAGCGCCTGA

Upstream 100 bases:

>100_bases
TCGGCTGAAGCATTAAAAAAATTGAATCTCTTGTTGTCGTTGCTTATCATCGCGTCAGAATATTTCAAATTTCAGACATA
TTTGAACGCGGGAGAGCGGC

Downstream 100 bases:

>100_bases
TCTCCGCCGGCCCACCGGCCGCGCCCTGTGATGGTGGCGGGTGTGTGATGCACCCGCCACAAGCGTTTTTTTATCCCATG
CCGGGCGCTTCCGATTGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: Outer Membrane Protein; Hemagglutinin-Related Protein; Type I Secretion Target Repeat-Containing Protein; Triple Helix Repeat-Containing Collagen; Adhesin Family Protein; Peptidase Metallopeptidase; Collagen Triple Helix Repeat-Containing Protein; Collagen Triple Helix Repeat; Peroxidase; Bifunctional Hemolysin/Adenylate Cyclase

Number of amino acids: Translated: 516; Mature: 515

Protein sequence:

>516_residues
MSDVTIPSGDTLILNASLTSNFSFPTTGSAPTDLVIEPSALSVTLVGITTAVTAIELGGNIQHFGPNDTIVLADATTDFS
NFDTSPSAPSDVMTFQNIASLAVSQDFRIYASDGLIITDSPLINLEYGPTLNTSLAPFINAIEQSMFGSIPSTGTLTISV
GLSDFGDSSAEPGPPSESGGYAFTITTGSDINPCFAAGTQIRTPAGETPVESLRAGDAVLTATGAERRVVWIGRRTLDLS
RHPRPELVRPVRIAAGALADGVPARDLVVSPDHALFLDGVLVQAKDLVDGTMIAPDRRISRVTYFHVELDRHDILLAEGA
PAESFLDTGHRGLFENAGEPITLHPDLMQARREAEGCAPLVTGGDALAAIRARLAARRAAQGFALVRVRPALRHGDLIIE
ASEEKPGTFRFALPANATEFELLAGTFVPAEVDPVSTDRRRLGLSVAGLALDGAALDLETAIPAPGRLPRAGGDAGVWTS
GNAGIRLPRAGAELVLTLTAQALFWTAPAAMRRASA

Sequences:

>Translated_516_residues
MSDVTIPSGDTLILNASLTSNFSFPTTGSAPTDLVIEPSALSVTLVGITTAVTAIELGGNIQHFGPNDTIVLADATTDFS
NFDTSPSAPSDVMTFQNIASLAVSQDFRIYASDGLIITDSPLINLEYGPTLNTSLAPFINAIEQSMFGSIPSTGTLTISV
GLSDFGDSSAEPGPPSESGGYAFTITTGSDINPCFAAGTQIRTPAGETPVESLRAGDAVLTATGAERRVVWIGRRTLDLS
RHPRPELVRPVRIAAGALADGVPARDLVVSPDHALFLDGVLVQAKDLVDGTMIAPDRRISRVTYFHVELDRHDILLAEGA
PAESFLDTGHRGLFENAGEPITLHPDLMQARREAEGCAPLVTGGDALAAIRARLAARRAAQGFALVRVRPALRHGDLIIE
ASEEKPGTFRFALPANATEFELLAGTFVPAEVDPVSTDRRRLGLSVAGLALDGAALDLETAIPAPGRLPRAGGDAGVWTS
GNAGIRLPRAGAELVLTLTAQALFWTAPAAMRRASA
>Mature_515_residues
SDVTIPSGDTLILNASLTSNFSFPTTGSAPTDLVIEPSALSVTLVGITTAVTAIELGGNIQHFGPNDTIVLADATTDFSN
FDTSPSAPSDVMTFQNIASLAVSQDFRIYASDGLIITDSPLINLEYGPTLNTSLAPFINAIEQSMFGSIPSTGTLTISVG
LSDFGDSSAEPGPPSESGGYAFTITTGSDINPCFAAGTQIRTPAGETPVESLRAGDAVLTATGAERRVVWIGRRTLDLSR
HPRPELVRPVRIAAGALADGVPARDLVVSPDHALFLDGVLVQAKDLVDGTMIAPDRRISRVTYFHVELDRHDILLAEGAP
AESFLDTGHRGLFENAGEPITLHPDLMQARREAEGCAPLVTGGDALAAIRARLAARRAAQGFALVRVRPALRHGDLIIEA
SEEKPGTFRFALPANATEFELLAGTFVPAEVDPVSTDRRRLGLSVAGLALDGAALDLETAIPAPGRLPRAGGDAGVWTSG
NAGIRLPRAGAELVLTLTAQALFWTAPAAMRRASA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53940; Mature: 53809

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDVTIPSGDTLILNASLTSNFSFPTTGSAPTDLVIEPSALSVTLVGITTAVTAIELGGN
CCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEECCCCEEEEEEEHHEEEEEEEECCC
IQHFGPNDTIVLADATTDFSNFDTSPSAPSDVMTFQNIASLAVSQDFRIYASDGLIITDS
EEEECCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCEEEECC
PLINLEYGPTLNTSLAPFINAIEQSMFGSIPSTGTLTISVGLSDFGDSSAEPGPPSESGG
CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
YAFTITTGSDINPCFAAGTQIRTPAGETPVESLRAGDAVLTATGAERRVVWIGRRTLDLS
EEEEEECCCCCCHHHHCCCEEECCCCCCCHHHHHCCCEEEEECCCCEEEEEEECEEECCC
RHPRPELVRPVRIAAGALADGVPARDLVVSPDHALFLDGVLVQAKDLVDGTMIAPDRRIS
CCCCHHHCCHHHHHHHHHHCCCCCCCEEECCCCEEEECCEEEEEHHHCCCEEECCCCCEE
RVTYFHVELDRHDILLAEGAPAESFLDTGHRGLFENAGEPITLHPDLMQARREAEGCAPL
EEEEEEEEECCCEEEEECCCCHHHHHHCCCCCHHHCCCCCEEECHHHHHHHHHHCCCCEE
VTGGDALAAIRARLAARRAAQGFALVRVRPALRHGDLIIEASEEKPGTFRFALPANATEF
EECCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCEEEEECCCCCCEEEEEECCCCCEE
ELLAGTFVPAEVDPVSTDRRRLGLSVAGLALDGAALDLETAIPAPGRLPRAGGDAGVWTS
EEEEEEECCCCCCCCCCCHHHHCCEEEEEEECCCEEEEHHCCCCCCCCCCCCCCCCEEEC
GNAGIRLPRAGAELVLTLTAQALFWTAPAAMRRASA
CCCCEEECCCCCEEEEEEEEHHHHHCCHHHHHHCCC
>Mature Secondary Structure 
SDVTIPSGDTLILNASLTSNFSFPTTGSAPTDLVIEPSALSVTLVGITTAVTAIELGGN
CCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEECCCCEEEEEEEHHEEEEEEEECCC
IQHFGPNDTIVLADATTDFSNFDTSPSAPSDVMTFQNIASLAVSQDFRIYASDGLIITDS
EEEECCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCEEEECC
PLINLEYGPTLNTSLAPFINAIEQSMFGSIPSTGTLTISVGLSDFGDSSAEPGPPSESGG
CEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
YAFTITTGSDINPCFAAGTQIRTPAGETPVESLRAGDAVLTATGAERRVVWIGRRTLDLS
EEEEEECCCCCCHHHHCCCEEECCCCCCCHHHHHCCCEEEEECCCCEEEEEEECEEECCC
RHPRPELVRPVRIAAGALADGVPARDLVVSPDHALFLDGVLVQAKDLVDGTMIAPDRRIS
CCCCHHHCCHHHHHHHHHHCCCCCCCEEECCCCEEEECCEEEEEHHHCCCEEECCCCCEE
RVTYFHVELDRHDILLAEGAPAESFLDTGHRGLFENAGEPITLHPDLMQARREAEGCAPL
EEEEEEEEECCCEEEEECCCCHHHHHHCCCCCHHHCCCCCEEECHHHHHHHHHHCCCCEE
VTGGDALAAIRARLAARRAAQGFALVRVRPALRHGDLIIEASEEKPGTFRFALPANATEF
EECCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCEEEEECCCCCCEEEEEECCCCCEE
ELLAGTFVPAEVDPVSTDRRRLGLSVAGLALDGAALDLETAIPAPGRLPRAGGDAGVWTS
EEEEEEECCCCCCCCCCCHHHHCCEEEEEEECCCEEEEHHCCCCCCCCCCCCCCCCEEEC
GNAGIRLPRAGAELVLTLTAQALFWTAPAAMRRASA
CCCCEEECCCCCEEEEEEEEHHHHHCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA